KEGG   Carassius auratus (goldfish): 113091899
Entry
113091899         CDS       T07313                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113091899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caua03041]
    113091899
Spliceosome [BR:caua03041]
 Complex B
  Other components
   Prp19-related factors
    113091899
 Complex C
    113091899
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_occluded zf-CCCH_2 zf-CCCH zf-CCCH_4 RRM_YTH1 RRM_3 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 113091899
NCBI-ProteinID: XP_026113359
Ensembl: ENSCARG00000062692
UniProt: A0A6P6NXZ9
LinkDB
Position
Unknown
AA seq 422 aa
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGMSIKDDIPRSDVNKEYYTQN
MEREIQNSDGTRPIGMLGKAQNPSDMLLKLARATPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRVSSMPRLDPPEDKSITTLYIGGLG
ENVTDSELRNNFYQYGEIRTITLVQRQQCAFIQFATRQGAELAAEKTFNKLIINGCRLAV
KWGRSHASKEMDVKDGIDEIGIGQEPVPGLPTTLPPPPALEEEAPANYFNLDPISSPALM
NISLPPPPGLPNPPPPGFGAPMFHPMGPPPPPPMALRPPGHIHYPSQDPQRMGAHAAIRH
SN
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcgacgtccctgggctcaaacacctacaacagacagaactgggaagattcggacttc
cctattctctgtcaaacatgtcttggggaaaatccatacattcgcatgaccaaggaaaag
tatggcaaggaatgtaagatatgtgcacgtcccttcactgttttccgctggtgtcctggt
gtacggatgcgctttaagaagactgaggtgtgtcagacctgcagtaagatgaagaacgtc
tgtcagacatgtttgctggacctggagtacggtcttccaatccaggtcagagacacaggc
atgtccatcaaagatgacataccgaggtctgacgtgaacaaggaatattacactcagaat
atggagagagagatccaaaactcagatggtaccagaccgatagggatgctgggtaaagca
cagaaccccagtgacatgctgctgaagctggcacgagccacaccgtactacaaacgcaac
agaccccatatctgctccttctgggtgaagggagagtgtaagagaggagaggagtgtccc
tacaggcatgagaaacccacagaccctgatgatcctctggccgatcagaacattaaagat
cgttattatggcatcaatgatccagtggcagataaacttctgaagagagtgtccagcatg
cctcgactggacccacctgaggacaagtccatcacaacgttatacattgggggactggga
gaaaacgtcactgactctgagctcagaaataatttctaccagtacggtgagatccgtaca
atcacgttggttcaaaggcagcagtgtgcattcattcagttcgccacacgacagggagca
gagctcgcagcagagaagaccttcaataagctcatcattaatggctgcaggttggcggtg
aagtggggcagatcacatgcctctaaagagatggatgtcaaggatgggatcgatgagatc
ggcatcggacaagaaccagtacctggtctccctacaactctaccgccaccccctgctctg
gaggaggaagcacctgctaactactttaacctggaccccatcagctctcctgcgctcatg
aacatcagtctgccacctccacctggtctcccaaacccaccgccaccaggttttggagct
cccatgttccaccccatgggccctcctccacctcccccgatggctttgagacctccaggc
cacatccattatccttcccaggatccccagcgcatgggtgcgcatgctgccattcgccac
agcaattga

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