Carassius auratus (goldfish): 113092477
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Entry
113092477 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113092477
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113092477
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
113092477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
Sina_ZnF
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-TRAF
zf-C3HC4_4
Prok-RING_4
PDZ_Tricorn
zf-rbx1
DUF1048
U-box
Motif
Other DBs
NCBI-GeneID:
113092477
NCBI-ProteinID:
XP_026113867
Ensembl:
ENSCARG00000040550
UniProt:
A0A6P6NYP1
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MGFDLDRFEGPVDPDLICKLCGKVLEDPLSTPCGHVFCAACALQWLAKVSRCPVQCQKIS
TKELNHVLPLKNLILKLDIRCDHRERGCNRVMKLQHLPEHAETCEFSPVSCGNKGCDAVL
SLRDVASHMREECEHRAVDFCKDGCGLALTLKRSEEDHSCLRALRTHSGLLQSKVLSLEK
ELKRQSLSFSKRERSLLSKLSALHCELHITALTFQRKITEYKSRIDALSSSWMPLEKGEE
TRSLKVTLHRTSSGSLGFSIIGGRLSGEPEQNWDISDGIYVSKIVENGAADKAGLHVHDR
IIEVNGRTLSVATHDQAIEAFQTAKDPLEVWVLRRTAQKTCRTLKPTRGMDNSTQTNITL
KTLQQIETLANMPSPSTPCMALLDSFRSPSQYQLARHDSPYSSDFHDDVQKDIESGGLEY
EEVDLQRKTTQDKLGLKLCYKTDDEKSAIYISEIDSEGIAAKDGRVQEGDQIIQINGMDI
QSHEAAVTLLTKVESKNVTLLVARPESQDVGRLEKDRYNLEDLHVGILEQQHHKVKEFTA
SMLQQSTNEEDGGTTDTATLLSNQHEKDSGVGRTDESTRNDESSEQDILGDDQNSFCDTL
PENHKKYNNNLDTVESGDMHLSNDSFLSVDNGDSGNFLGIPGTTCDHFRKQLEPKSLMNG
NSLPGFLEHDATLFGKRVNGDCDDQEIQILNEELLNIELKCLSIIQAHRLKAEIGDLQAK
NPSNEHFIEQVHQDLINNQVDNEGSTSAYNTGESSWSLRPALESDSPDSQRMVAGDKGKG
SPMHRRNSTAGCSKHHLSPIQEISPTKSLPGDPEVINQGKRKQSKKKIPRKSLLPSLCHS
SYKNTYIPAHAQHYQSYMQLIQQKSAVEYAQSQVSLASLCMNAETTPTESKLKMGWKVKI
RSDGTRYITKRPIRDQLLKKRALHIREERCSATTDDDAASELKLGRYWNKEERKQHAARA
KEQRQRRELAKQCIESKEQAGAMDKEADIIQLSRKRMMKRRNKKIFDNWMTIQELLTHGT
MSTDDKRLYNSFLSVTTV
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgatctagaccgttttgaaggtcccgtggatccggacttaatctgtaaactg
tgtgggaaagttttagaagatcctctcagcactccgtgcggacatgtcttctgcgccgcg
tgcgcgctccagtggctcgccaaagtcagccgctgccctgtccagtgccagaagatctcc
accaaagagctgaaccacgtcctgcccctaaaaaacctcattctcaagctggacatcaga
tgcgaccaccgtgaacgaggctgcaaccgggtaatgaagctccagcatcttccagagcac
gcggagacctgcgaattctccccggtcagttgcgggaataaaggatgcgacgcggtgctc
agcttgagggatgtggcctcacatatgcgggaggaatgcgagcacagggcggtggatttc
tgtaaggatggatgtggactcgcgctgaccctcaagaggtcggaggaggaccacagctgt
ctccgggctcttaggacacacagcggtctcctccaaagcaaagtgctgagtctggagaag
gagctgaagcgccagtctctgagcttcagtaagagggagagatctctcctctccaaactg
tccgcgctccactgcgagctgcacatcacagcgctcacatttcagaggaaaatcaccgag
tacaagagcaggattgacgcgctgtcgagcagctggatgcccctcgagaagggtgaagaa
acaaggagcctcaaagtcaccctccacagaacatcatcaggatcccttggattcagtatc
attggagggagattgtctggggaaccagagcagaattgggatatcagtgatggcatctat
gtatccaagatagtggaaaacggagcagctgacaaggccggactgcatgttcatgacagg
atcattgaggtaaatggaagaaccctctctgtcgccacccatgatcaagcaatagaggct
ttccaaactgccaaagaccctcttgaggtttgggtactccgcaggacggcacaaaagact
tgcaggactcttaaaccaacccgaggaatggacaacagtactcagaccaacattacgctg
aaaaccttgcaacaaatagagactttggccaacatgccatcaccttctactccatgtatg
gctttgctggacagtttccgttcaccctcacagtatcaattggcaagacatgattcacct
tattcctcagacttccatgatgatgtacagaaagacattgagagtggaggcctggaatat
gaggaggtggatctgcagaggaaaaccactcaggataagcttggcctgaagttatgttac
aagacggatgatgagaagtctgccatttatattagcgagattgattcagaaggaattgct
gcaaaagatggcagagttcaggaaggagaccaaattatccagatcaatggaatggacatc
cagagccatgaggcggcagtgacacttctgaccaaggtggagagtaagaatgtgaccctt
ctagtggctcgaccagaaagtcaggatgttggccggttggagaaggatagatacaactta
gaagacttgcacgtgggcatactggagcagcaacatcacaaggtcaaggagtttactgca
agtatgctgcagcagagcacaaatgaagaagatggaggcactacagatacggctacttta
ctatccaaccagcatgaaaaagacagcggcgtaggccgcacagacgaaagcactcgtaat
gatgaaagctcagagcaagacatcttgggggatgaccagaattccttctgtgacactctc
ccagaaaaccacaagaagtacaacaataatctggacactgttgaaagtggggacatgcac
ttaagcaatgactccttcctttcagttgacaatggagacagtggaaacttccttggcata
cctggcacaacatgtgatcatttccggaaacagcttgaaccgaaatctctgatgaatggt
aacagtcttccgggatttctggagcatgatgccacactatttggaaagagggtaaatgga
gactgtgatgatcaagagattcaaatacttaatgaggagctactgaacattgagcttaag
tgcctgagtatcatacaagcacacaggcttaaggctgaaattggtgatctgcaagccaaa
aatcccagtaacgagcactttattgagcaagtccatcaggacctcatcaataaccaagtg
gacaatgaaggctctactagtgcttacaacactggagagagcagctggagcttacgtcct
gctctggagtcagattctcccgactcccaaaggatggttgctggagacaagggtaaaggt
tctcccatgcatagacgcaactcaacagcaggatgctccaaacatcacctctcccccatt
caggagatcagtcccaccaagagtttgcctggagatccagaggtcataaatcaagggaaa
agaaagcagagtaagaaaaagatcccaaggaagagtcttttgccatccttgtgtcattcc
tcatacaagaacacctacatcccagctcatgcacaacattaccaaagctacatgcaactt
atccagcagaagtcagctgtggaatatgcccagagccaagtcagcttagccagcctgtgc
atgaatgcagaaaccacccccacagagtccaagctcaagatggggtggaaggtaaagatc
cgtagcgatggaacaagatacatcaccaaaaggcccatcagggaccagcttctgaagaag
cgagctttgcacattcgagaagaacgctgcagcgcaacaacagatgacgatgcagcaagt
gaactaaaactgggtcgatactggaacaaagaggagcgcaaacagcatgcggcacgagcc
aaagaacagcgtcaacggcgggaactcgcaaaacagtgcatagagagcaaagaacaagca
ggagcaatggacaaggaggcggatattatccagcttagccgtaaaaggatgatgaagagg
aggaacaagaagatatttgacaactggatgaccattcaggagctgctgacacatggcaca
atgtccacagacgataaaagactatataattcctttctttctgtgactacagtttaa
DBGET
integrated database retrieval system
