KEGG   Carassius auratus (goldfish): 113092811
Entry
113092811         CDS       T07313                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:caua03037]
    113092811 (ift140)
Cilium and associated proteins [BR:caua03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   113092811 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_HPS5 WD40_Prp19 TPR_COPA_B tRNA_int_end_N2 TPR_GEMI5 Beta-prop_CAF1B_HIR1 TPR_IFT80_172 Beta-prop_WDR35_TULP_N Consortin_N Clathrin Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 113092811
NCBI-ProteinID: XP_026114346
Ensembl: ENSCARG00000041138
UniProt: A0A6P6NZZ2
LinkDB
Position
Unknown
AA seq 1440 aa
MAVYFDHRVEAPDTNGVALLISWHSSLCVLAVGSVNASTGGCVDLYLQQGEHVELCHVER
GFSPSLLLWHPTKPLLAVGWETGETMLLSHPSGELTPLPNNTHASCITVLEWSNNGSRLV
TGDQAGVMAVWRVDARGKLQGSPLIKHDYSKPLTCCIFRPPPPAEDVATLARAAVSGDES
ALDMFNWKKSNKGAAFALGSQEALTFFISTADGSVYSVDEQARSVPLVSVESAVQTMWYS
KRRDVLAVVTDSLLLSQFSLGPEGIAQEISKVKLSGRGVQHADIVWTESGLLITASGEQH
IRLWDVELDDHYALSLDESLGFEKGELLNCVSFCTSKQVLAGGTSKGRVALWHMVTVSDQ
KGDTKIHWKLQTPAEVEGNISQLKWGSSSHLLAVCSSSCVVILSEHVMCSHYSQQMAAVQ
LTPTQLSLANFNTNTHTTFSTDTHIRAVQVTKDMVVVWNGKYITVYEPSGQTLHSTGSFQ
CESPALVVHEENIYTVEPNRVQIRTPQGTVKQLLAFSEAEGNPTLLSVCGSYLAVGTDTC
HVRVFDLTRREAKALGVTKNLSELIPDLGALRSVKCNASGSQLSILIAQVNGRPDNKVYF
YDIELDTLSHFDFFTGRPESSLAQSEDSQRTQCEGELAARCPVSQFWDENEPRMFVCETV
PVNSDLLCSSQSQTEKEDVLVVTFFVTQEHGVLLQDSQPKPATLLSLLALDTPYYYYICK
LGEGGDQGVSTPATAPQVPSSPQMVVRRALRDFVGLESCEKQTRDAMLNFSFYLTIGDMD
EAFKAIKLIKSEAVWENMARMCVKSRRLDVARVCLGNMGNARAARALREAEKEPEVEAQV
AVLATQLGMLEDAERLYKSCGRFDLLNKFYQAAGQWQQAVETAETHDRIHLRTTYYSYAK
HLEAMGDKNLALVYFEKSDTHRFEVPRMLMEDNLSLEIYINKMKDKDLYKWWGHYLESQS
DMEAALHYYDLAQDYLSQVRVYCYLGNIQKASEIANETGNRAASYHVARQYEGQDEISQS
VHFYTRAQAYNNAIRLCKENNLDEQLMNLALLSNPEDMMDTAMYYEEKGTHMDRAVMLYH
KAGHVSKALELAFATEQFGALQLIAEDLNENSDPALLARCSDFFIKHAQYQKAVELLVAA
KKYHEALQLCLDQSLTITEDLAESLTVPKDSSHLSEAGRRELLEKIADCCMRQGNYHLAT
KKYTQAGNKIKAMRALLKSGDTEKIVFFAGVSRQKEIYVMAANYLQSLDWRNDPEIMKNI
ISFYTKGRALDLLAGFYEACAEVEIDDFQNYEKAYGALTEACKCLTKAKADSKLLMLTHR
LNLVKRFIQARRMHEEDPVEAVRVCESLLDEKDLDPAVRVGDVYGFLVEHYCNHGNFQQA
WSKIEDLRSTRPNINLSLYVSQTSLEALQNAAGVRLVYRDTDTHAAEDEEEVEEDENITH
NT seq 4323 nt   +upstreamnt  +downstreamnt
atggctgtgtattttgatcatcgcgtggaggcccctgacaccaatggagtggccctcctg
atctcgtggcactccagcttgtgtgtgttggccgtgggctccgtgaatgcctccactggg
ggctgcgtggatctttacctgcaacagggggagcatgtcgagctctgtcatgtggaacgg
ggattcagcccctcgttattactgtggcacccgactaaacccctgctggcggtgggatgg
gagacgggcgagaccatgctcctctcacacccctccggtgaactcacacccctgcccaac
aacacacatgcctcctgcatcacagtgctggagtggagcaataacggcagccgactggtt
acaggagatcaggcaggtgtaatggcagtatggagggtggacgctagagggaaacttcag
ggatctcctctgataaaacatgactacagtaaaccactgacgtgttgcatcttcagacct
ccaccacctgctgaggatgtggcgacgctggctcgtgctgctgttagcggggacgaaagc
gctctggacatgtttaactggaagaagagcaataaaggagcagcgtttgcgctgggttca
caggaagcactgacgttcttcatcagtactgctgacgggagtgtgtacagcgtggatgag
caggcacggagtgtgccattggtttccgtcgagagcgctgtacagacgatgtggtactcc
aaaagaagagatgttctcgccgtggttacagactcactgctgctctctcagttcagtctt
ggaccggaaggaatcgctcaggagatcagtaaggtgaagctcagtggcagaggtgtgcag
cacgcagacattgtgtggacagaaagcggtttgctcatcaccgcatcaggagaacaacac
atcaggttgtgggatgtggagctggatgatcattacgctctgtcactggatgagtctctg
ggctttgaaaaaggagaacttctcaactgtgtgtctttttgcacttctaaacaagttctt
gcgggcggtaccagcaaaggccgtgttgctctgtggcacatggtgactgtgagcgatcag
aagggggacacgaaaatacactggaaactccagacaccagcagaggtggaaggaaacatc
tcacagctaaaatggggttcgagctctcatctgttggccgtctgcagcagcagctgtgtg
gtgattctgtcagagcatgtgatgtgttctcattacagccagcagatggcagcagtgcag
ctcacaccaacacagctcagcctggccaacttcaacaccaacacacacaccaccttcagc
acagacacacacatcagagccgtgcaagtcaccaaggatatggtcgtggtgtggaatggg
aaatatatcactgtgtacgagccatcaggacaaaccctacatagcacaggttctttccag
tgtgagtctcctgctcttgtggtacatgaagaaaacatttatactgtcgaacctaaccgc
gtccagatccgcacaccacagggcaccgtgaagcagttgttggcgttttctgaagcggaa
ggaaacccgaccctgctgagtgtgtgtggatcttacctggctgtgggaacagatacatgt
cacgtcagagtctttgacctcacacgaagggaggccaaagccctaggagtcacgaagaac
ctctctgagctcattcctgacctgggcgctctgagatcagtcaaatgcaatgcgagcggc
agtcagttgagcatcctcattgcacaggtgaacgggcggccggataacaaagtgtatttc
tatgacatcgagctggacacgctgtctcacttcgacttcttcacagggaggccagagagc
agtctcgcacagtccgaggacagtcaaagaactcaatgtgagggggagttggccgcccgg
tgccctgtttctcagttctgggacgagaacgagccacgtatgtttgtgtgtgaaacagtt
ccagtgaactctgacctcctctgcagcagccaatcacaaacagagaaggaggacgtgttg
gtggtgacgttctttgtgacacaggaacacggtgtcctcctgcaggactcacagcctaaa
cctgctacgctgctctctctactggctttagatacaccgtattactattatatctgcaag
ctgggtgagggtggagatcagggggtctcgactcccgccactgcgccccaggtgccttca
tcccctcagatggtggtacgacgagcccttcgagattttgtggggttggagagctgcgag
aagcagacccgagacgccatgctgaacttcagcttctacctcactataggggacatggat
gaagcatttaaagccatcaaactcatcaagagtgaggcagtgtgggagaacatggcacgg
atgtgtgtgaagagtcgtcgtctggacgtggcacgtgtgtgtctggggaacatgggtaat
gcacgggccgctcgtgcactcagggaagccgaaaaagagccggaggtggaggcacaggtg
gctgtactggctacacagctgggcatgctggaggatgcagagcgtttgtataagtcatgc
gggaggtttgatttattgaataagttttatcaggcggcagggcagtggcagcaggcggtg
gagacggcagaaacacacgaccgcatccacctccgaaccacttactacagctacgccaaa
cacctggaggccatgggagacaagaacctagcgctggtgtattttgagaagtcagacaca
catcggtttgaagtgcccaggatgctgatggaggacaatctttcactggagatctacatc
aataagatgaaggacaaggatctgtataagtggtggggtcactatctagagagccaatca
gacatggaggctgcgctgcattactacgacctcgctcaggactatctgtctcaagtgcgc
gtgtactgttatctaggaaacattcaaaaggcgagtgagatagccaatgagacgggcaac
agagcggcgtcttatcacgtcgcacgccagtacgagggacaagatgagatcagccaatcg
gtgcacttctacacacgagcgcaagcctataacaacgccatacgactgtgtaaagagaat
aacctggacgagcagctcatgaatctggcgctgcttagcaatccagaggacatgatggac
acagccatgtattatgaagagaaaggaacgcacatggaccgagctgttatgctttatcat
aaggcaggtcatgtgtccaaggctttagagctagcttttgccacagagcagtttggagcg
ctgcagctgatcgcagaggacctgaatgaaaacagtgaccctgccttactagcacgctgc
tctgatttcttcataaagcacgctcagtaccagaaagctgtggaactgctggtggctgcc
aaaaagtaccatgaggcgctccagttgtgtttggaccagagtttgaccatcacagaagat
ctggccgaaagcctgacggtgccaaaagactcgtcccatctgtctgaggccggccggagg
gagctgctggagaaaatcgcagactgctgcatgcggcagggcaactatcacttagccact
aagaaatacacacaagctggaaacaagatcaaggcgatgcgagcgctgttgaaatccggg
gatacagagaaaatagtgtttttcgcaggcgtttccagacagaaggaaatttacgtaatg
gcagccaactacctgcagtcactggactggaggaacgacccggagatcatgaagaacatc
atcagcttctacaccaaaggacgagctcttgatctgctcgccggcttctatgaagcctgt
gctgaggtggaaattgatgattttcagaattatgagaaggcatatggcgctcttacggag
gcctgcaagtgtctgactaaagcgaaggctgacagcaaactcctcatgctgacacacaga
ctcaaccttgtcaagagattcattcaggcacgaaggatgcatgaggaggatccagtggaa
gcggtgcgtgtgtgtgagtctctgctggatgagaaggatctggaccctgcggtgcgtgtt
ggagatgtgtatgggttcctggtggagcactactgcaatcatggtaacttccagcaggct
tggagtaaaatcgaggacttgagatcaacgcgtcccaacataaacttgagcttgtacgtg
agtcagaccagtctggaggctctacagaacgctgctggagtccgtctggtctacagagac
acagacacccatgctgccgaggacgaggaagaggtggaggaagatgagaacatcactcat
taa

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