Carassius auratus (goldfish): 113093108
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Entry
113093108 CDS
T07313
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113093108
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113093108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
7TM_GPCR_Sri
Motif
Other DBs
NCBI-GeneID:
113093108
NCBI-ProteinID:
XP_026114736
UniProt:
A0A6P6P0Y3
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MKQLLRMIFLRLLRNLHNQWMVSAHSKWQFVLFILCVYGADVVYCNARYSIPEEMPEGSF
VGNIAKDLGIEISRLISGKARVVTKGGRQYVDLRRDKGTLVVKERIDREELCKQMTPCSF
SFDLIVENPIQLHRVTIEVYDINDNAPLFPKENVNLNITENAVLGARFPLDSAIDTDVGL
NGIQSYKLHPTDNFKLEVHSQTDGNKYIEMVLQRELDREERGEIQLVLVATDGGSPQKSG
TVKIYVTVLDANDNAPVCKQSVFKTEVRENAPAGTVIGTISAADADEGVNGHVSYSFAVA
SKEASELFGMSSDTGEIRLLNNLDYESQNRFQLNINARDKGGLSDTCKIVIDVIDENDNS
PTIQLMSFSNTLPENSPVGTTIAVINLEDADSGKNGLVQCSINKNIPFKIESSLAEYYTL
VTDDMLDRESLAEYNVTILVSDQGSPPRHANKTLNLKVSDVNDNPPKFEFEEYKTFVSEN
NFPGLTILTVKANDADWGPNAQLTYFLKDEDMRGAPLSSLVSVDSLTGSIHAVKSFDFEQ
LKSFAFNVTARDGGSPPMSSEVTITINIQDQNDNAPQVLYPVQTGASVVAEIVPRAAEVG
YLVTKVVAVDVDSGQNAWLSYKLQKATDRALFEVGLQNGEIRTVRQVTDKDAVKQKLTVV
VEDNGHPSRSAVVSINVAVADSFPEVLSEFTDFTNGKQYDENLTFYLVLALAAVSFLFIT
CVVVIISVKIYRWRQSRFLYQSNLPVIPYYPSHYADTGVTGTLPHGYNYEVCMTTDSRKS
DCKFSTLGGKNVLVVDPSFTETIQCSMKDTHFVEDPESAEMVRSLVLKTSGVFLFFILVF
FKKGC
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcttctcaggatgattttcttaaggttattgagaaatttacacaatcaatgg
atggtttccgcacattcaaaatggcagtttgtgttgttcattctctgcgtttatggagcg
gatgtcgtatattgcaatgcgagatattccatcccggaggaaatgccagagggatcattc
gttggaaacatcgccaaggatctggggatagagataagtagactcatatctggaaaagct
cgcgtcgtaacaaagggcggacgacagtatgtcgatctgaggagagacaaagggactcta
gtagttaaagaaaggatagatcgggaggagctctgtaaacagatgacgccttgcagcttc
agctttgatcttattgttgaaaaccctatccagctccatcgagtcacaattgaggtgtat
gatataaacgataatgctccgttatttccgaaagagaatgttaatttgaacattaccgaa
aatgcggttttaggagctcgctttcctttagacagcgctatagatacagatgtaggtcta
aatggtatacagagctataaactacatccaactgataattttaaactggaggtgcatagt
cagaccgatggcaacaaatacattgagatggttttacaacgagaactagaccgagaggag
cgcggtgagattcaattggttcttgtggcaactgatggtggatcccctcagaaatcaggc
actgtaaaaatctacgttactgttctggatgccaatgataatgccccggtgtgtaaacag
tcggtatttaaaactgaagttagagaaaatgcacctgctggtactgtcataggtaccatt
agtgctgctgatgctgacgaaggtgtaaatggccatgtttcctattccttcgctgttgca
agcaaagaagcaagtgagctttttgggatgagctcagatacaggtgagattagacttctt
aataatttagattatgaatctcaaaacagatttcaattaaatattaatgcaagagataaa
ggaggcctgtcggatacttgtaaaattgttatagatgtaattgatgaaaatgacaactct
ccaaccatacagctgatgtcgttctcaaacactcttcctgaaaattccccagtgggaaca
accatagccgtaattaacctagaggacgcagattctggtaaaaatggccttgttcaatgc
tcaataaataaaaatataccgtttaaaattgagtcatctctagcagaatattacactttg
gttactgatgatatgcttgatcgagaaagtcttgctgaatataatgtgacaatattggta
tcagaccaaggaagtcctccgcgacacgcaaacaaaacgcttaatttaaaagtatcagat
gtcaatgacaatcctccaaaattcgagtttgaggaatataaaacatttgttagtgaaaat
aattttcctggtctcactatactgactgttaaagcaaatgatgctgactggggtccaaat
gcgcaattgacctacttcctgaaggatgaagacatgcgtggtgcaccattaagttctctc
gtatctgtagattcgcttacaggcagtattcatgcagttaagtcatttgattttgaacag
ttaaaatcgtttgcttttaacgtaacagctcgagatggaggatccccgccaatgagctct
gaagtgacaataactatcaatattcaagatcagaatgataacgctcctcaggttctgtat
ccagtacagaccggtgcttctgtggtggctgagattgtgcctcgtgctgcagaggttgga
tatctggtcactaaagtggtggctgttgatgtggactctggacagaatgcctggctctcc
tataaactacagaaagctacagacagagcgctgtttgaagtgggtttacagaatggagaa
ataagaactgtgcgacaagtgactgataaagatgctgtcaaacaaaaactgactgttgtt
gtggaagataacggacacccctctcgctcagctgtggtctccattaacgtggctgtggct
gacagctttcctgaagtgctgtcagagttcacagactttacgaatggaaaacagtatgac
gagaatctgaccttttatttagttctcgcactggccgctgtttctttcttatttatcaca
tgcgtggttgtgataatatcagtcaagatctacagatggagacaatctcgcttcttatat
cagtccaatctgcctgttattccgtactatccatcgcattacgcagacacaggagtcacc
ggaactctgccgcacggttataattatgaagtgtgcatgacgactgactcgaggaaaagt
gactgtaagttttctacactgggtgggaagaatgtcttagtggtggacccgagtttcact
gaaacgattcaatgctcaatgaaagacacacacttcgtagaagatcccgagtcagcagaa
atggtaagatcgctggttcttaaaacgtctggagtatttttattttttattttagttttt
tttaagaagggctgttag
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