Carassius auratus (goldfish): 113093806
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Entry
113093806 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113093806
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113093806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113093806
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113093806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
113093806
NCBI-ProteinID:
XP_026115153
Ensembl:
ENSCARG00000031812
UniProt:
A0A6P6P2L0
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MAATGGGKIRSRRHHIASKPYAKGKTGKSNESLQQPGLISRVTDTVKSIVPSWLQNYFKN
GEVSEGDTSAVGVDRNNVAPXPNGSDEVTPLPDGRHSPEPSTSNTEPSTSRASRNYHEAL
SRPPLNRTHLHFPSLDGSPLGGTSSLFSQPSTSTAPFSGSPFAVTSNFSLVKEIKDSSSQ
HEDDNISTTSGFSSRASDKDLPTSKNVPPLWSPETERTHSGSQTAHSGLKKPAFNLSVFG
TSSSSVLSSSVLNSSQLGDSPFYPGKTTYGGAAAMRSARSRPATPYQPPVRRQIKAKPAG
AQPCGVTSATARRILQSLERMSSPLADAKRIPSTVSSPLSASLNHTDLDVSNFQAKRKRL
EPSVPPVQKLVVPAAAAVSGNRSVSFRPSLTPGGVNRGVEKNNRETAVRQSPQISDHGQA
PSPSTSSLSYPLSSTPAVSSAGSIGGKMKRDRAIRPSSKKPEDEFVEEPDLPPASLPSSF
TLPTFNFSSPTPTSSLPSKPFATASEEPAANKEAAAPSTPPSVPFTFSSPIVKATAASPP
TFSPSSGFTFSAPTMKTGPSYSNGKIVPTVAPVKSVASEEKEFEGPFKPAKVLKQGSVLD
ILKGPGFATPAQNAVDKPLPSISTSSAALSGFGDKFRPPAGSWSCGTCLLQNKSSDKMCV
ACLAPQPNTDSASKSDSKPTEAPASISSLFAPPAGSWDCDTCLVRNKPDVVKCVACDTSK
PGTGVKSRLTLPALSDASSTLSATSSATTTATTTASSATGLLGFGDKFKKPEGSWDCDVC
MVQNKAQDVKCVACQSSKPGAVATSVSTPVSAPASTAAPLIGFGDKFKKPEGSWECEVCC
VQNKAEDQQCVACQSAKPGAKIESKGFSSSFGVQSNSTESGSSAFKFGTSSTDSTSAGLK
FGGTFSDTTSTTSGFKFGFGSSNSTSKSEGFKFGGLSSDAASGGVTLGCASSESTAKTES
LSKGFTFGGSVDDSLEKKTKSQDSSTGFKFGGDGGITFSSQASGSENSAFLFGAKPSEKG
SSDSSFSFSVPPSKAEKDAPASSETVSTTATTTAANVIPIFGKSLVAESSALRFGEPSTK
SQTLVTSTFTFGKTEEKKDTSAPSGAFLFGASKEADKPAPTLGFSFGEPDPPKDFPKPTL
TFGKPADSAEAPKPSFSFGQSMTETSAPKPPFGLMANSSSTPASSSSIPSLFGTPTTSSL
TPTPAPSSTFVFGQNTSTDHTVAKTFMFGQQPQDSQPAPPAAPSAAPAPVQPFQFGSGTN
SSSTAFTFGAVASSTPASSAPAPPANPSPFVFSSTTPSSGFGSGQTPIFGQSASQPSAPA
FGSAAPSFSATASPASAFGAKPNSASVFGQQANPAPTFGSAASSTAQGGFQFGSTGGFGA
QGSSNSVFAFGAGSAAPATPAASPAMPTLNPPSGGGFSFGQTPSFNIGSGKSFNATPSGQ
TSVTGRKIKTAVRRRK
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacaggaggagggaaaatcagatcaagaagacaccacatcgcttcaaaacct
tatgccaaaggcaaaacaggtaaatcaaacgaatccctacagcagcctggcctgatcagt
cgggtcacagatacagtgaagagcatagtcccctcctggctgcagaattacttcaaaaat
ggagaagtttcagagggtgataccagtgcagtcggagtggaccggaataatgtggctcct
ncccctaatggcagcgacgaagtcaccccgctcccagatggacgacactctccagagccg
agcacaagtaacacagaaccatctacgagtagagcgtcacggaactaccatgaagctctt
tcgagacccccactcaatcggacccacctgcacttcccctctctggatggttccccatta
ggtggcacaagctccctcttctcccagccctccacatccacagcacccttctcagggagc
cctttcgctgtaacctccaacttctccctggtgaaagagattaaggattccagttctcag
catgaggatgacaatatctcgactaccagtggcttttcgtcacgtgcatctgataaagat
ttgcccacatcgaagaatgtgccacccctttggtctccagagacagaacgcacccacagt
ggatcacagacagcccactctgggttgaaaaaaccagccttcaacctgtcagtctttggc
acttcctcatcatcagtgttgagcagttcagtgctgaactccagtcagttgggggattca
cccttctacccagggaagaccacgtatggaggagctgctgcaatgagatcggctcgttcg
cgtccagctactccttaccagcctcccgttaggagacagataaaggcaaagccagctggc
gctcaaccctgtggagtaaccagtgccacagcgagacgcatcctacagtccctggagcgc
atgtccagtcctcttgctgatgcaaaaagaattccgtctacagtttcatcacctctgtca
gcttcactgaatcacacagaccttgatgtttcaaattttcaggcaaagaggaaaaggctg
gagccgtcagtccctcctgtgcaaaagctggtggtccctgcagctgctgcagtgtctggt
aaccgttcggtatcctttagaccatcactgaccccaggtggagtgaacagaggagtggag
aaaaacaacagggagactgcggtaagacaatcccctcaaatttcagatcatggccaggct
ccctctcccagcacaagcagtttgtcctaccccttgtccagcacacctgcagtcagtagc
gctggttcaatagggggcaaaatgaagagggatagggccatcagaccttcatccaaaaaa
cctgaagatgagtttgtcgaggaaccagacctgccccctgcttctcttcccagcagtttc
actttgccaacatttaatttctcctctcctacccccacctcatcgctcccctcaaaacca
tttgcgactgcctctgaggaaccggcagcaaataaggaggcagctgcaccatccacacca
ccatctgtccccttcacgttctcttcacctatcgtcaaggcaacagctgccagtcctcca
actttctctccatcatctggattcaccttcagtgcgcctactatgaagacgggcccctct
tactccaatgggaaaattgttccaacagtagcaccagtcaaatcagtggccagtgaagaa
aaggagtttgaaggacccttcaaacctgcaaaggttttaaaacagggcagtgtattggat
atacttaagggacctggatttgcaacccctgctcagaatgcagttgataaacctctgccg
tctatatcaacatcctctgctgctctttcgggttttggggacaagttcaggccacctgca
gggtcatggagctgtggtacttgtctactgcaaaacaagtcctcagacaagatgtgtgta
gcttgtcttgcaccgcaacccaacacagactctgcctctaaatcagacagtaaacccaca
gaagctcctgcgagcatcagctccctcttcgctcctccagctggtagctgggactgtgac
acatgtttggtcaggaacaaaccggacgtagttaaatgtgtagcttgtgacacgtccaaa
ccagggactggagtgaaatccagactgactttaccagctctttctgacgcctcgtccacc
ctctctgccacctcttctgcaaccaccacagcaacaacaactgcttcttcagcaactgga
ctgttagggtttggggacaaatttaagaagccagaggggtcttgggattgtgatgtatgc
atggttcaaaacaaggcacaggatgtgaaatgtgtagcctgtcagagctctaaacctgga
gctgtagccacatcggtctcgaccccagtctctgcacctgcaagcactgctgcgcctttg
ataggattcggggacaagtttaagaaacctgaggggagctgggagtgtgaggtgtgctgt
gttcagaataaggcagaggaccagcagtgtgtggcttgccagtcagcaaaaccaggggct
aaaatagagtccaaaggttttagttcatcatttggcgttcagtccaacagtacagaatca
ggttcatctgcttttaagtttggtaccagctctacggactcaacctctgctggactgaag
tttggaggcactttctcagatactacttccaccacaagtggatttaaatttggatttggg
tcctccaactcaacctcaaaatcagagggcttcaaatttggaggcttatcctcggatgca
gcttctggtggggtcacacttgggtgtgcctcatcagaatccacagcaaaaacagagagc
ttgtcaaagggctttacatttggtggatccgtagatgactcgcttgaaaaaaagactaaa
tctcaggattctagtacaggatttaaatttggtggtgatggtggaatcactttcagctct
caagcttctggctccgaaaactcagcatttttgtttggagctaaacccagtgagaaagga
agctcagattcatcctttagtttttctgtgcccccatccaaagctgagaaagatgctcct
gcttcctcagaaacagtttcgaccactgcaacaacgacggcagcgaatgtcattcctatt
tttggcaagtctttagtagctgaatcttctgcattgagatttggggaaccatcaacgaaa
tcgcaaactctagtgacgtccaccttcaccttcggaaaaacggaagagaaaaaggacacc
tccgcaccctccggtgcattcttattcggtgcttccaaggaagctgacaaaccggcacca
accttgggcttctcttttggcgagccggaccctccaaaagatttccccaagcctacactt
acatttgggaaacctgctgattcagcagaagccccaaaaccgtcatttagttttggacag
agcatgacagaaacatctgctccaaagcccccttttggcttaatggccaactcctcaagc
accccagcttcctccagctccattcccagcctttttggcactcccactacctcttccctg
actcccacacctgcgccctcgagtacctttgtgtttggccagaatacctccactgatcat
accgtggcaaagactttcatgtttggacagcagccgcaggacagccagcccgcacctcct
gcagcaccttctgctgcacctgccccagtacaacccttccaatttggctctggtacaaac
tcatcctccactgcattcacttttggtgccgttgcgtcctccaccccagcctcttccgcc
ccagctccacctgccaacccttccccatttgtcttcagttctaccacaccttcatctggc
tttggttctggacagacccccatcttcggtcaaagtgcgtctcaacccagtgctcctgca
tttggttcagcagcaccttcgttctctgccactgcttcgccagcttctgccttcggagcc
aagcccaactctgcctctgtatttggtcagcaagctaaccctgcacctacgtttggatct
gctgcttcctccacagcccaaggaggattccagtttggaagtactggtggatttggagca
caagggagcagcaatagtgtgtttgcctttggggccggatcagcagctccagcaactcct
gccgccagtcctgccatgcccactttaaatcctccctctggtgggggcttcagctttggt
cagaccccttcttttaacattgggtcaggaaagagtttcaacgcaacaccatctgggcag
acttcagtcactggacgtaaaatcaaaactgctgttcgacgcaggaagtaa
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