KEGG   Carassius auratus (goldfish): 113094658
Entry
113094658         CDS       T07313                                 
Name
(RefSeq) collagen alpha-1(VII) chain-like isoform X1
  KO
K16628  collagen type VII alpha
Organism
caua  Carassius auratus (goldfish)
SSDB
Motif
Pfam: Collagen fn3 VWA VWA_2 Kunitz_BPTI Interfer-bind Pur_ac_phosph_N
Other DBs
NCBI-GeneID: 113094658
NCBI-ProteinID: XP_026116022
UniProt: A0A6P6P4V9
LinkDB
Position
6:complement(9117897..9175022)
AA seq 3112 aa
MGCLLQWTLLLAVLLCLPSRSTAQGQCNNVVAADIVFLVDGSSSIGRANFVLVKNFMAGI
VKPFTRVVGPSGIRFGTIQYSDTARVEFTFTTYLNGTELITAIENINYKGGNTRTGAGLK
YIADNFFSPSSIRDVPKITILITDGKSQDSVKEPSQKLRSLGVKIFAVGIKSADAAELKL
IASPPQSEFTSQIGNFRALSSLLPLVSRRVCTTTGGSYSSDEAYSGPSDLQFSSETTNSL
RFQWKSAGGPVSGYVVQYRPLSGLGQPITAELRQETIPSYQQSYTAGELRSGTDYLITVI
AQYPNSLGESVSGKAQTKPLQGVTALRLIQAGFFTLALGWDTPADQVQGYRITYGPIGQP
AAQLQEQSVGAESTSLTLVGLKSDTEYLISLYPLFPRNSASPATLTARTLRLEGVQQLSV
ETISSSSVRVRWTGVAGARGYRIVWGPFTGSDVETIELGGDSESHTLGNLRPDAEYIVTV
ITLYSGEAEGPAATARFKIERSEQQVLRATTTGPTSIRLNWNLIQAARGYRLEWRAGERG
RVQKQEFPKSTTNYELKSLQPNTEYIITLYTLYEGREEATIFSTKPTVEQQVGPVTNLRV
VDSLGNTIRLGWTGVSGATQYNIIILNTESNAEVNRRVPGNQTTFDLRDLEDGVRYAVSV
NALIGSKEGEQATVYIVTEPPLRVTNLRIVGSNSRRVRIAWTGVSEATGYRVTWRQSNTA
EQSRVLGGDITTYTIDGLQPDDSVVVGVAPLVNGYTGEVVSVSTRTSGSNGIVTGLRVIE
VTSARIVISWTPVTRATGYKIIWRRSDGVEDSEIVPADVVFYGIERLQEGAAYQILVSAL
FNSREGPSATVTASTDQVTVGRVTNLQVVEAQGEVVRVSWVGVQNATSYRILWKRTDGGE
EQSQLVGGNVTSVDLRQLDEGAQYEVKVLAIVRNREGPPVSVRVTTGSQRGTRVEGLRVL
DSTPGGLRITWRAVRGASSYRIYWRSSQGEPESSRLISGDATSYSLDGLRPGLSYTVRLS
AIVEGQETEATTIRATTDALPPVTGLSVTDSTENSVLLGWSPVTGATGYILRWTEKEDTG
TGQSETLPGTATSYRVTGLRLGRQYGFTLQPTFQNQVGPETSVTERTVCVGGRLDVVFLV
PASRDRSGLVGPVLSLLASSAGSLTSIGPRDSQMGVVMYSEDPKVRFPLNRHSNSETLLQ
DILTTPFNDRPGNNIGQAMTYARQFLLSAPEGRRYSVPGVVVIIADEKSTDDLSQPAAAV
RADGVTVLAVGIGRADTRELRSAVTDGSTQNLLYAQDADQLYGLHPDLADLLCGLARGTS
VTPGPCTVQCHQGAKGELGQKGERGRDGVDGRKGEPGRDGLPGREGPRGPEGPPGQPGSS
LGVRGEKGERGFPGLDGSPGVPGRPGAVGLPGIQGLAGVRGDPGEPGLLGPQGLKGEKGE
RGEPGSADGGGLPGRKGEPGIPGIPGTPGRSGVDGAKGEPGARGLSGLDGLPGLPGTDGL
SIKGEKGSPGERGPPGVGSGVAAKGDAGEPGSPGPPGPQGPRGLNGQKGAKGESGESTEG
KPGPQGNTGDPGDRGPRGPPGEIGSKGDRGQTGPPGSDGAKGDRGLPGPAGDKGDKGSAG
PPGPQGLRGLSGSSGLPGEKGAEGEKGQPGSCDCQSSFGKKGERGERGLPGLAGSKGDKG
DAGQKGERGVPGAGEPGQPGPKGDQGDRGFTGLSGKHGVKGNQGDPGERGETGSPGPQGP
MGPRGKDGLRGDKGEDGIPGESGLAGKPGERGLRGLPGQPGQSGPKGDTGDPGEDGRNGT
PGPTGPRGPKGEQGIQGPPGPPADVTSGEKQLKGDRGEKGEAGDPGEHGGKGQKGEPGVS
GPQGPSGPEGPRGLSGARGDQGDRGSPGDKGERGAAGLDGRPGQDGKPGPPGAPGLRGDP
GKQGDPGRDGLAGLRGPQGPLGPPGPPGDNGTPGKAGVDGKPGLPGKPGEDGVPGEDGRK
GDKGESGPAGRDGRDGLKGDQGIAGPIGPQGPIGPPGVPGNVGPPGPVVYVKGELATPIP
GPQGPPGAPGVPGIPGNAGQRGERGLPGLKGDVGDPGEDGRPGNVADVKKAFSEFGIEVK
ELKLLIDEREKMISQLNELMKGKRGEKGDVGPRGPAGADGARGFPGERGVKGEQGDKGPA
GPQGPPGRAIGERGPEGPPGQAGEPGKPGIPGVPGRAGELGEAGRPGDKGGKGEKGDRGL
AGPAGLPGLGGPPGPKGDSASAQSGLPGARGLPGPQGIRGEAGPVGPPGPTGERGYTGPR
GEKGDKGASGESGKDGSPGSPGEPGKPGLDGKPGLKGPAGSQGLPGNPGEPGIRGPTGPM
GGNGPPGAPGVKGDQGEPGIGVQGPPGPQGNRGLPGPSGTPGAIGPQGPPGLPGQVGEGG
KPGVPGRDGVPGKDGLPGLSGKQGIAGPIGPSGLKGEQGDIGPPGKSVTGPPGKKGEMGP
SGLTLPGTAGERGLPGSPGPKGDKGPAGIKGERGAAGDPGDPGENGLRGPPGLKGVKGEA
GVGMSGPPGQPGPTGLKGDPGLPGPPGPPGPRGLDGTPGLAGQRGEAGQPGPPGPPGDRG
QQGFIGKDGNPGTPGGVGPPGPPGNAGLAGLKGNKGEIGVGVPGLRGERGDPGPRGDEGR
AGTDGERGPSGPPGSKGNRGDKGEQGPSGIKGEKGDTQLVGGPPGEKGVKGETGERGPKG
AQGEKGAKGQEGPPGEQGLRGEPGERGSTGFQGARGPGGQKGEAGQPGVPGEAGTPGKDG
LPGMRGEKGEFGPVGSRGLKGERGAKGACGQSGAKGDKGDAGINGRPGLPGKKGEQGEVG
SPGPTGSPGKEGLIGDKGDRGFDGVTGSKGSQGEKGERGQPGIPGPTGPRGVDGPPGLTG
PQGPSGGKGPEGLQGQKGERGPPGPAMVGPRGIPGIPGVTGEQGEIGPDGPKGDRGEPGM
TEDEIRTYVRSEMNLHCACGGVQEVEKAVAVQAYRSSSTSPERSLVQGDEEGQKLHVVMN
TNDPDYEHIYSIETYDDDAPMVEIADYDTTVNKSQGQTVSFDSLKAEKTTFEVKGEDSCI
LPMEEGNCSRFTLRWYFNSEVGVCRPFIYSGCGGNANRFLQKEDCEKLCLQQ
NT seq 9339 nt   +upstreamnt  +downstreamnt
atggggtgtttgctgcaatggactctgctgcttgctgtgttgctgtgtctcccatcacgg
tctactgctcaaggtcagtgcaataatgttgttgcagcagacattgtgttcctagtagat
ggatcatccagtattggccgggccaactttgtgttggtcaagaatttcatggcagggatt
gtcaaaccctttaccagagtggtaggacccagtggcatccgtttcggaaccatacagtac
agcgatactgccagggtggagtttacatttactacatacctgaatggaactgagctcata
actgccatagagaatatcaactataaaggtggaaacacgcggactggggctggtctcaaa
tacatcgcagacaacttcttcagcccttcctctatcagagatgtacccaagatcactatt
ctcattactgatggtaaatctcaggacagtgtgaaggagccttctcaaaaactacgtagc
cttggagtaaaaatatttgcagtgggtataaagagtgcagacgcagctgagctgaagctc
attgcctctcctcctcaaagtgaattcacctctcagattgggaatttcagagctctcagc
tcattgctgcccctagtgtctcgacgtgtgtgtacaacaactggaggctcttactcaagt
gatgaagcctacagtggtccatcagacttgcagttttcaagtgagaccaccaattcactg
agatttcaatggaagtctgcaggagggcctgtaagtggctatgtggtccagtacaggccc
ctatctggcctgggtcagccaatcacagcagagcttcgacaggaaacaataccaagctac
cagcagagctatactgcaggagagctgcgttcaggcacagactacctgatcactgttatt
gctcaatacccaaacagcttgggagagtcagtgtctggcaaggcccaaacaaagcctctc
caaggtgtgactgcactgcgactgatccaggccgggttttttactctggccttgggctgg
gacactccagctgaccaagtacagggttacagaatcacctatggacctataggtcagcct
gctgcacagctgcaggaacaatctgtgggggcagagtctacttctctgactttagtcggt
cttaagtcagatacagaatatctgatcagcttgtaccctctgttcccccgtaacagtgcc
tcacccgctaccctgacagcccgcacattgcgtttagagggagtacagcagctttctgtt
gagactatctcaagcagcagtgttcgagtccgctggacgggagtggcgggggccagagga
tatagaatcgtttggggccctttcacaggaagtgatgtggagacgatagaactgggaggt
gatagtgaatctcacactctggggaatctgagaccagatgcagagtacattgttacagtc
atcactttgtacagcggagaagccgaaggaccagcagccactgcacgttttaagatagag
cgctcagagcaacaggtcttgagagccacgactacgggacccaccagcatcagattgaac
tggaaccttatacaggccgccagaggctaccgactggaatggagagccggagagagaggc
agagttcagaagcaagagttcccaaaaagtaccaccaactatgagctcaaaagtctgcag
ccgaacacagagtacatcattactctatacacactctacgaggggcgagaagaagctact
atcttttcaaccaaaccaacagtagagcagcaagttggtcctgtcacgaatctgagggtg
gtggattcactcggaaacacaattcgattaggatggacaggagtctctggggcaacacaa
tacaacatcatcattcttaatacagaatcaaatgcagaggtgaacagaagagttcctggg
aatcagaccacttttgacctacgggatcttgaagatggtgtacggtatgctgtcagtgta
aatgcactaattggatccaaagaaggggaacaagcaacagtgtacattgtaacagaaccg
ccactgagggtgaccaacttgcgaatagttgggagcaacagtcgacgagtcaggattgca
tggactggtgtttcggaggcaacgggctaccgggttacctggagacaaagcaacactgca
gagcaatctcgtgtcctaggtggtgatatcactacctacactatagacggcttgcagcca
gatgattctgttgttgtgggtgttgccccactggttaatgggtatactggagaagtggtc
tctgtgtctacaagaaccagtggttctaatggaattgttacagggctaagagtcattgaa
gtaacatctgcaaggatagtaatatcctggactccagtgactcgagcaacaggctataaa
ataatctggcggcgaagtgatggagtggaagactctgagattgtacctgctgatgtggtt
ttctatggcattgaaagactccaggaaggggcagcttaccaaatattagtctcagccctt
tttaactcaagggaaggaccttctgccactgtgacagcaagcacagatcaggtcacagtg
ggtcgcgtcactaatttacaggtggtggaggcccaaggggaggttgttcgagtcagctgg
gttggagttcaaaatgcgacttcatacagaatactctggaagaggactgatggtggagag
gagcagagtcagctggttggaggtaacgtgacctcagtggatctgaggcagttggatgaa
ggggcacagtatgaagtgaaggtcctggctatagttcggaacagagaaggcccacctgtc
tccgtcagagtcactacggggagccagagagggacaagagtagagggtttgcgtgttttg
gactcgaccccaggggggctccgtataacctggagagcagtgcgtggagccagctcatat
cgaatctactggagatcctcacaaggtgaacctgaatcaagtcgtctgattagtggcgat
gcaacttcatacagccttgatgggcttcgacccggtctgagctacactgtaagattgtct
gctatagtggagggtcaagaaactgaagctaccaccatcagagcaaccactgatgccctg
ccacctgtgactggtttgagtgtgactgacagtactgagaattcagtccttttaggctgg
tcaccagtaacaggagccacaggatatattttacgctggacagagaaagaagacacagga
acgggtcagtctgaaacactgcccggaacagccacttcttaccgtgtgacaggtctacga
ctgggccgtcagtacggtttcaccctgcagcccaccttccaaaaccaggttggacctgag
accagcgtgactgaacgcacagtgtgtgtgggagggcgtttggatgttgtcttccttgtc
cccgcatctcgtgatcgttctggcctggtgggacctgtgttgtctctgcttgccagctct
gctggatccttaacctccatcggacccagagactcccagatgggggtggtgatgtacagt
gaagatccaaaagtgcgcttccccctcaatcgtcatagcaacagtgagaccctgctgcag
gatattttgaccaccccattcaatgacagaccaggaaataatataggccaagcaatgaca
tacgcacgtcagtttttgctgagcgcaccagaaggtcggcggtatagtgttcccggggtg
gttgttattatcgcagatgagaagtcaactgatgatcttagccagcccgctgctgctgtt
agagctgatggtgtgacagtgttggcggtaggaattggacgtgcagacactagagagctg
cggtcggcagtgacggatggcagcactcagaacctgctctatgctcaagacgcagatcag
ctctatggcctccaccccgacctggcagacctcctctgtggtcttgcacgtgggactagt
gtcacgccagggccttgtactgtacagtgtcatcaaggtgctaaaggggaactgggtcag
aagggtgagaggggcagagatggagtagatggaagaaaaggcgagcctggtcgtgatggt
ttacccggtcgtgagggccccagaggaccagaggggccaccaggtcaaccaggcagcagt
ctgggagtgagaggagagaaaggcgagagaggtttcccaggactggatggcagtccaggt
gttccaggccgtcctggtgcagttggattacctggcattcagggattagcaggtgtgaga
ggagaccctggagaaccaggccttttaggccctcagggattaaaaggagagaaaggtgaa
aggggagaacctggatctgctgatggaggaggtttaccgggccgtaaaggagagccagga
atcccagggatccctggtactcctggtcgttcaggtgtggatggggcgaagggagagcca
ggtgcacgaggtctgtctggactggatggactccctgggttgccaggcactgatggactt
tctattaagggtgaaaaaggcagccctggtgagaggggtcctcccggagtgggtagtggg
gtagctgctaaaggagatgccggtgaacctggaagtcctggaccgcctggtcctcagggc
ccacgaggactgaatggacaaaaaggagccaaaggagaatctggtgagagtactgagggt
aaaccaggcccccaaggaaacaccggagaccctggtgatcggggtccccgaggacctcct
ggtgaaatcggaagtaagggtgatcgaggacagactggaccacctggttcagacggagcc
aagggagacagaggccttccaggtccagcaggagacaagggagataaaggttcagctggc
ccccctggacctcaaggattgaggggattgtcagggagcagtggccttcccggggaaaag
ggtgctgagggtgaaaaagggcaaccaggaagctgtgactgtcagagttcatttgggaag
aaaggagagcggggtgaaaggggcctcccaggacttgctggcagtaaaggtgataaagga
gatgcaggacaaaaaggggaaaggggtgtccctggagcaggagagcccggccaacctgga
cctaaaggggaccagggtgatcggggtttcactgggttgtctggaaaacacggtgtgaag
ggcaatcaaggtgacccgggggagagaggggagacaggaagtcctggtccacaggggccc
atgggccccagagggaaggatggactacgaggagacaaaggagaggatggcattccagga
gaatcagggttggcgggtaaacctggggagagaggtctaagaggactgccaggtcaacca
ggacagtctgggccaaagggagacacgggggatccaggggaagatggaagaaatggcacc
ccaggtcccaccggaccaagaggcccaaagggagaacagggaatacaaggtccccccggg
ccacctgctgatgtgacatctggagagaaacaactaaaaggtgacagaggagaaaaggga
gaggcgggtgacccaggggagcatgggggtaagggtcagaagggtgaaccaggagtttca
ggcccacaaggaccaagcggtcctgaggggccgcgtgggctatcaggagccagaggtgac
caaggcgataggggcagtccaggagacaagggagaaagaggagccgctggtttggatgga
cgacccggtcaggatgggaaacctgggcctcctggagctcctggattacggggtgaccca
ggaaagcaaggggatcctggaagagatggcttggcgggactaagagggcctcaggggccg
ctaggaccacctgggcccccgggagataatggcacacctggtaaagcaggggtggatggg
aaaccaggactgccgggaaaacctggcgaggatggtgtgccaggagaggatggtcgaaag
ggagataaaggagagtcggggcctgctggaagagatggccgagatgggttgaaaggtgat
caggggattgcaggacctattggtcctcaaggtcccattggaccccctggagttcctgga
aatgttggaccaccaggacctgtggtgtatgttaaaggggagctagcaacacctattcca
ggcccccagggccctccaggagcccctggagtacctggaattccaggaaatgctggacaa
agaggggagagaggtctgccaggcttgaaaggagatgtgggtgatccaggagaggatggc
agaccaggaaatgtagcggatgtgaagaaagctttttcagaatttggcattgaggtcaaa
gaactgaaactattaattgatgaaagagaaaaaatgatatcacagttgaatgaactgatg
aagggaaagagaggagaaaaaggagatgtcggacctagaggccctgcaggagcagatggt
gcaaggggttttccaggtgaacgaggtgtgaaaggagagcagggtgataaagggcctgct
ggcccacagggtcctccaggcagggcaattggagaaagaggcccagaaggtccaccagga
caggcaggtgaacctggaaaaccaggaataccaggagtaccaggacgagccggtgaactt
ggagaagctggcagacctggggacaaggggggaaaaggggagaaaggtgacagagggcta
gctggtccagctggattgcctggcttaggggggcctccaggaccaaagggggattctgca
tctgctcagagtggtttgcctggtgcgaggggtcttccaggaccccaaggtatcagagga
gaggctggtccagtaggacctcctggacctacaggagagaggggctacacaggtcctcgt
ggggagaagggagacaaaggagccagtggagaaagtggaaaagatggctccccaggaagt
ccaggagagccaggaaaaccagggctggatgggaagccgggtttgaagggaccggccggt
tcgcaaggcctacctgggaatccaggagaaccaggaataagaggaccaacgggacctatg
ggcggaaatggacccccaggggctcctggtgtgaagggtgaccaaggagaaccaggcatt
ggagttcaaggccctcctggacctcagggcaacagagggttacctggaccttcaggcact
ccaggagcaataggaccacaaggacctccagggcttccaggacaagtgggagaggggggc
aagcctggggtcccagggagagacggtgttccaggaaaagatggcctgccagggttatct
gggaaacagggtatcgccggacccattggcccctcaggattaaaaggagagcagggagac
atcggtccaccaggaaagtctgtcactggaccccctggaaagaagggtgagatgggtcct
tctggtctgacattgccaggtaccgctggagaaagaggccttcctggatcaccgggtcca
aagggagacaaagggccagcgggaatcaaaggagaaagaggtgctgcgggtgatcctgga
gatcctggtgagaatggtttaagaggaccaccagggctcaaaggagtcaaaggagaagct
ggtgtgggaatgtctgggcctccaggacaacctggacccactggcttaaagggtgaccct
ggcttaccaggtcccccgggccctcctggaccacgtggattggatggcacgccaggactg
gcagggcagagaggtgaagcaggtcagccaggaccccctggaccaccaggagacaggggt
caacaaggatttattggcaaagatggaaacccaggaacaccaggaggtgttgggccccca
ggaccccctggtaatgcgggccttgcaggactgaagggcaataaaggtgaaattggagta
ggagtgccaggtttaagaggagagcgaggagacccagggcctcggggagatgaaggtcgg
gctggaacagatggagagagaggcccttctggtcctcctggcagcaaaggaaacagagga
gataagggcgaacaaggtccttcaggaattaaaggagaaaagggagatactcagctggtg
gggggacctccaggagagaaaggagtgaaaggagaaactggggagcgaggacctaaaggt
gcacagggtgaaaagggtgcaaagggacaggaaggaccaccaggagaacagggcctgaga
ggagagccgggagagagaggttccactggcttccagggagcccgtggtcctggtggtcag
aagggagaagcagggcagcctggtgtcccaggagaagcaggaacacctggtaaagatggt
ctgcctggaatgagaggagaaaagggagagtttgggcctgtaggttcgcgaggccttaag
ggagaacgaggcgccaagggagcatgtggacaaagcggagcgaaaggagacaagggggat
gctgggattaatggcagaccgggattgccagggaagaaaggagagcagggtgaagtcggg
tctccaggtcccacaggaagtccagggaaggaaggactcattggagacaagggtgacaga
ggctttgatggagttacggggtcgaagggatcacaaggagagaaaggtgaaaggggccaa
cctggtatccctggtcccactggtccaagaggagtggatggaccccctggtttgacaggc
cctcaaggaccttctggaggtaaaggtccagagggcctgcaaggacaaaagggagaaaga
ggtcctccaggccctgctatggtcggcccacgtggcatccctgggatcccaggagtaaca
ggagaacagggtgagattggccctgatggacctaaaggagacagaggagaaccaggcatg
acggaggatgagattcggacttatgttcgaagtgagatgaacctgcattgtgcttgtgga
ggtgttcaggaagttgagaaagctgtagcagtgcaggcttaccgaagctcctccacgtcc
cctgagcgttcactagtccaaggggacgaggagggtcagaagctgcatgttgtgatgaac
acaaatgatccagactacgagcacatttactctatagagacctatgatgacgatgctcca
atggtggagattgctgactatgacaccactgtcaataaaagccagggtcaaactgtctct
tttgattctttaaaagctgaaaagacaacatttgaggtgaaaggtgaagactcctgcatc
ttgcccatggaagagggtaattgttcccgctttactttgcgttggtactttaactctgag
gtgggcgtctgtagaccttttatctacagcggctgtggaggaaacgctaaccgcttttta
cagaaggaagattgtgagaaactctgtctacaacaataa

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