Carassius auratus (goldfish): 113095737
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Entry
113095737 CDS
T07313
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113095737
03015 mRNA surveillance pathway
113095737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113095737
03041 Spliceosome [BR:
caua03041
]
113095737
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113095737
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
113095737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
113095737
NCBI-ProteinID:
XP_026116877
Ensembl:
ENSCARG00000058858
UniProt:
A0A6P6P7A1
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLEKKVDMTKVNLEVVKPWITQRVTEIL
GFEDDVVIEFVFNQLEEKNPDGKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKIDEDKREKESKERAQSKSPKRRKSRSPVKRDRKP
SPSRSPRRKLSPAGSPPSSPLNHKEEPKQEPDQSESSKPEPLVQEASSTSDLVGEMKPDS
VSEAVKESSPDKISKSEDKPKPRDRDREKGGRRDRPHHRSRSPRSRRRPRSRSRSFSPRR
RTSPRRRISPRRRSPPRRQPPSRHRRSRSPVRRRRSRSRSFSGSSSSHSPHKRAGKRGSA
TPPRKLPRRSDPSSPSRRRGRSPSGLDTSPSAVKHRPGGRNDSPSPKPRRSDASDSEEEK
VGKESTADSVPQRRQYRRQNQQTSSDSGSSSSSEDEGSRRPNRGGGARNGEIRRRRSRSP
ASPRRRQRDASPRKRRSPSPSGRRHRSPSPVRRRRSPSPPPRRRSPSPPHRRFTPPIQRR
YSPSPPPAQKRRSSGSPPKRRRSPSPVSKRRGSPSPVSKRRGSPSPLSKRRGSPSPLSKH
RGSPSPLSKRRGSPSPVAKRRGSPSPVAKRRGSPSPVAKRRGSPSPVAKRRGSPSPVAKR
RGSPSPVAKRRSSRSPKRSRGSSPGKRRTPPSSASPRHRRSSPNPPATQRGRDSRSSPSA
HSTRVSSSPPARYGPSGSSPQRQRRQTSPSQSSTRPIRRVSRTPEPRKSQRGSQSPQPVR
RQVSRSPSASPPPAPTALKRPASVSPSRSASRSPPPPAKKSSSVSPSPSPNKNSDAEGSK
KKKKKKEKKHKKEKKHKKHKKQKKEKSGEEKSGGAGGGHGQEAEPDSDQKKESESEVEDS
LDDLEKQLREKALRSMRKAQMSPSSQS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggtttttccgcggcaccagtgcggagcaggataaccgcttcagcaacaaa
cacaagaaacttttgaagcaactgaagtttgcagaatgtctggagaagaaggtggacatg
accaaggtcaacctggaggtcgtgaagccctggataacccagcgtgtgacggagatcctt
ggctttgaggatgatgttgtcatcgaatttgtcttcaaccagctggaggaaaagaatcca
gatggaaagatgatgcagattaatttgactgggtttctgaatgggaagaacgctcgagag
ttcatgaaagacctctggccgctgttgctaagcgcccaggagaacatcgctggtattcca
tctgccttcctggagcagaagaaagaggagatcaaacagagacagatcgaacaggagaaa
cttgcctctctgaaaaaaatagatgaagataaaagagagaaggagagcaaagaaagagct
cagtcaaaaagccctaaaaggaggaagtcccgctctcctgtgaagcgtgaccgtaagccc
agtccctctcgatctcctcgccgaaaactgagcccggctggctcgccgccttccagtcca
ctcaatcataaagaagaaccaaagcaagaaccggaccaatcagagagctccaaaccagag
ccgcttgttcaggaggcttcctctactagtgatctagtgggtgaaatgaagccagactcc
gtgtctgaggctgtgaaagagtcttctccagataaaatatccaaatcggaagacaagccc
aaacctagagaccgagacagagagaagggtggacgtagagatcgcccacaccaccgctcc
cgttcacctcgttctcgtagacgacctcgatcccgctctaggtctttctctcctcgtcgc
agaactagtcccaggaggcgaatctctccaagacgtaggagccctcctagacggcaaccg
ccctctaggcatagacgtagccgttcacctgtccgcaggcggcgctctcgctcccggtcc
ttctctggtagttcatcctctcattcaccccataagagagcagggaaacgggggtcagct
accccacccagaaaacttccacgtcgctctgacccctccagcccttccagaagacgaggt
cgtagtccctcaggactagacaccagcccttcagctgtgaagcacaggcctggtggaaga
aacgactctccttctcctaaacccagacggtcggatgcatcagattccgaggaggagaag
gtgggcaaagagtcaacagcagattctgtcccgcagcgacgtcagtatcgcagacagaat
cagcagacctcttcagactctggctcatcatcttcctctgaagatgaaggttcaaggaga
ccgaatagggggggaggtgcgaggaatggagaaatcagaaggcggcggagccgttcacct
gcatcaccacggagacggcaaagagatgcatcaccaagaaagaggcgttctccatcacct
tctggccgcagacatcgttcaccttctcctgttcgccgccgaagatcaccctctcctccc
ccaagacgcagatctccatctccacctcaccggcgcttcactcccccaatccagcgccga
tacagtccctcccctcccccagctcaaaagagacgctcatcagggtctcctcccaagcgc
agaagatctccatcccccgtgtccaagcgtagagggtctccttcacctgtgtccaagcgc
agaggatctccatcacctttgtccaagcgtagagggtctccttcacctttgtccaagcat
agagggtctccttcacctttgtccaagcgcagagggtctccctcacccgttgctaagcgc
agagggtctccctcacccgttgctaagcgcagagggtctccctcacccgttgctaagcgc
agagggtctccctcacccgttgctaagcgcagagggtctccctcacccgttgctaagcgc
agagggtctccctctcctgtggccaaacgtcggtcctctcgatccccgaaacggagtcgt
ggcagtagtccaggaaaaagacgtactccaccctcctctgcttcaccccgccaccgtaga
agctctccaaatcctcctgcaacccaacggggcagagatagtcgctcttctccctctgca
catagcacacgagtgtcttccagtcctccagctcgatacggcccctctggttcatcccca
cagagacaaagacgccagacgtccccgtctcaaagtagtaccagacccattcgcagggtt
tctcgcacaccagagccacgcaaatctcagagaggttctcagagcccccaaccagtaagg
aggcaggtttcacggtcaccatctgcttctcctccacctgctccgacggccctcaagcgg
cctgcttcagtctccccttctcgctctgctagccgttctccacctccacctgccaaaaag
agcagcagtgtctccccgagcccatcacctaacaagaactctgatgcagaaggtagtaag
aagaagaaaaagaagaaagaaaagaaacacaagaaagagaagaagcacaagaagcataag
aaacagaaaaaggagaagagtggagaagaaaagagtggaggggcaggaggaggacacgga
caggaagcagagccagactctgaccagaaaaaggaatcagagagtgaagtagaagacagt
ttggatgatctggagaagcaactacgtgagaaagctcttcgctcaatgaggaaggcccag
atgtctccatcatcccagtcctga
DBGET
integrated database retrieval system
