Carassius auratus (goldfish): 113096095
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Entry
113096095 CDS
T07313
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04137
Mitophagy - animal
caua04140
Autophagy - animal
caua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113096095
04137 Mitophagy - animal
113096095
04148 Efferocytosis
113096095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113096095
Transcription factors [BR:
caua03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113096095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
113096095
NCBI-ProteinID:
XP_026117275
Ensembl:
ENSCARG00000046291
UniProt:
A0A6P6P9K9
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MDSVAPGKKRVSSERRKEKSRDAARCRRGKESEVFYDLARELPLPHSVTSNLDKASVMRL
ALSYLRLRKLLNTEVLNVESELDSQWNSSYMKALDGFLMVLSADGDIVYLSENVSKCLGL
PQIDLTGHSVFEFTHPCDHEELREMLAHRTGLSKKVKEQHTNRSFLLRMKCTLTSRGRTV
NVKSASWKVLRCSGHIHTTDGIKKGLCEEKNVCSTYLVLICESIPHPTNIEAPLDSRTFL
SRHTLDMRFTYCDERITELLGFEPVDLLQHSVYEYYHALDSDHMTKTHHNLFIKGQVCTG
QYRLLAKAGGFAWAETQATVIYNSKNSQPQCVVCINYILSGIEQPKQILSLQQTNSTKIK
QEQEEHYEESLGTEVSTEELKEAIKANNEKKEECVREELHDSLKGEPEALTVADPVLTLD
ITSTESALSVLTEIPLYNDVMLPSSSVLLPLSPLSPTCSSLNDDDPSTAHLQPDDFQIPQ
SSPPDPSRSQVDLPLDSELSDQLKPDHVERLFSMDIDSKTPFNTEGVGLDLEMLAPYIHM
EDDYQLRTASPAESMCSSPGSALELTPSSSTQPAPALPAAPLDLVSSDTVPQNTRTTKQD
NSREIIQDSDISSKCQTNPKLLKRKLETIPLSEAIRLGSVLQVVTDFPEKKVRKSDASSS
EGIRHATILLLPSDVASRLLTRSSEGGAVTMPLPQLTRYDCEVNVPVTGRQHLLQGEELL
CALDLLI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtcgcacctgggaaaaaaagagtgagttcagagcgaaggaaggagaaatcc
agagatgcggcacgttgtcggagaggaaaagagtcagaggtgttttatgacctggccaga
gaactgcccctcccccacagtgtgacctctaacctggataaagcatcagtaatgagactc
gcactcagttacctgcgcctgcgtaaactactgaacacagaggtactgaatgtggagtcg
gaattagattctcagtggaacagttcatatatgaaagctctggatgggtttctcatggtt
ctttctgctgatggcgacatcgtctacctgtcagaaaatgtcagcaagtgtctgggcctt
cctcagattgacctcactggacacagtgtgtttgagtttactcatccatgtgaccatgag
gagctcagagaaatgctggcacacaggactggtctgtctaagaaagtgaaagagcagcac
acaaacagaagttttctattgaggatgaaatgtacactgaccagtagagggcgcactgtc
aatgtcaaatctgcctcctggaaggtgttgcgctgttcgggccatatccacacaacagat
ggcatcaagaagggtctgtgtgaggaaaaaaatgtgtgttcaacgtacctggtgctcatc
tgtgagtctattccccacccgacgaacattgaggctcctctggattctagaacatttctc
agccgccacactttagatatgcgcttcacctactgcgatgagaggatcacagagctgttg
ggtttcgagccagtggatctgttgcagcattctgtgtatgaatactatcacgcgctggat
tctgaccacatgaccaaaacacaccacaacctgtttataaagggacaagtgtgcactgga
cagtaccggctccttgctaaagcaggagggtttgcttgggcagagactcaagccactgtg
atctataacagtaaaaactcccagccgcagtgtgtggtctgcattaactacatcctcagt
ggcattgaacagcccaaacaaatcctgtcccttcagcaaaccaacagcacaaaaataaaa
caggaacaggaagaacactatgaagagtcactcggaactgaagtgagtacggaagagttg
aaagaagcgataaaggcaaataatgagaagaaagaggagtgtgtgagagaggagctacat
gacagcctgaagggggagccagaagcactgactgtagcagaccctgtcctcactctggat
atcaccagcacagagtctgcactttctgtgttgacagaaatacctctctacaatgacgtt
atgttgccctcttcaagtgtcctgctacctctctcacccctctctcctacctgctcctcc
ctaaatgatgatgatccctccacagcccatctacaacctgacgacttccaaatcccacaa
tcttcgcctcctgatccttccagatcccaggtcgatctccctttggattcagaattaagt
gaccagctaaaaccggatcacgtggagagactattttccatggatatagattccaagaca
ccctttaatacagagggagtgggtttggatctggagatgttagctccatacattcacatg
gaagatgattaccagctgcggactgcttctccagctgagtcaatgtgttccagcccgggt
tcagcgcttgaactgaccccctccagcagcacacaacctgcccctgctctcccagcagcc
cctctagacttagtgtccagtgacactgttccacagaacactagaaccacaaagcaggac
aacagcagggaaattattcaagacagtgatatttcttccaaatgtcagaccaacccaaag
ctactcaagagaaaactggagaccatacctctgtctgaagcaataaggcttggttctgtg
ctgcaggtggtgactgattttccagagaaaaaggtcagaaaatcagacgcttcatcatca
gaagggattcgtcatgcgacgatactgttgctgccatctgatgttgcaagtaggttattg
accagatcatcagagggtggagccgtaacgatgcccctcccccagcttacccgttatgac
tgtgaggttaatgtgcctgtgactgggcggcagcacctgctacagggggaggagctactg
tgtgccttggacctacttatttaa
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