Carassius auratus (goldfish): 113096346
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Entry
113096346 CDS
T07313
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113096346
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
caua00537
]
113096346
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
Contactins
113096346
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
caua00537
]
Others
113096346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_2
Tissue_fac
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
113096346
NCBI-ProteinID:
XP_026117503
Ensembl:
ENSCARG00000033727
UniProt:
A0A6P6P906
LinkDB
All DBs
Position
6:complement(11167994..11225150)
Genome browser
AA seq
1029 aa
AA seq
DB search
MTLLWKRLVALSIIGCLAVLSAEAEDTKFLGPSWKKEPEDLILPIHSPEQEAVLTCEASG
VPSPQYRWSLNGTLIDLRGDERRRLSGGNLIITGLDRDQDSGVYQCTASNTRGTILSQRA
TLQFAYLESFKMQTRSAVNVREGQGVVLLCGTPLHSGELTFTWVFNEYPHFVHQDSRRFV
SQETGNLYIAKVEPSDVGNYTCVVNNTITKERVFSSPTPLVLRNDGAMGEYEPKIELHFP
DTIPAAKGSTLKLECFALGNPVPRISWRRTSDVSFPSKVKLKNSNAILEIPSFQQEDTGT
YECIAENSRGKNAARGRMSFHATPHWLQTMMDKSLSIEENLFWECKANGKPKPSYSWLKN
GETLISEGRVQIENGALSISSLNLSDGGMYQCVAENKHGIIYSSAELMVLASAPSFSQNP
LSRVLKARSGSDVSLDCRPHASPRAISLWKRGTEILQRSERISLFPNGTLKIANVTKRDG
GTYTCIAKNQFGTASTTGRLIITEPTRISQGPSSTEITVGESIVLPCQVTADPALEVAFS
WAFNGQPIDFHQDADHFERVGGSFSGDLMIRNIQLNHGGKYVCLIDTDVESLSADAILVV
KGAPSPPDLVVVEEVTDSTAQLSWSPGQDNGSPITGYVIQARTPFTVGWQAVDTVPEVIN
GNTLTATVVGLNAWVEYEFRVLASNSVGMGEPSPPSTKIRTEDAMPDTAPTDVGGGGGTK
SELVITWEPVPEELQNGEGFGYIIAFRPVGMVTWTRAVISAPSVTRYVFRNDTIPPFSPF
NIKVGAFNNRGEGPFSSIATVFSAEEVPSVAPERVSAKSLSAADIEVTWEPIASTPERVL
GYEVVYWEDDTKPDTVGKVRITGNYTAVNVSGLQGNTQYYIAVCAFNTAGTGPQSVHVNV
TTKKPPPGQPPQNVEWNLIGSQLVLQWDPVIALETESEVTGYIVLYRRHRNNDMYSIITN
KTSVELTLNPNDNYVIQIKTLSEGGLGEGSEPIHIYQLSMGARGSRAGRLCTLSLSPLLI
CALSTLSAS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgacgttactatggaaacgacttgtggcgctatcaatcattggctgcctcgcagtttta
tcagcagaagcagaagacacaaagtttcttggtccgagctggaaaaaggaacccgaagat
ctgatactgcccatccactctcctgagcaggaggctgttttaacttgtgaggcatccgga
gtcccttcccctcagtacagatggtctctaaacggaacgctcattgatcttcgtggtgac
gagaggcgtcgcctttctgggggtaacctgatcattactggcctggatcgggatcaagac
agtggtgtctaccaatgcactgcctccaacacccggggaaccattctcagccagagagcc
acattacagtttgcatatctggaaagcttcaaaatgcagacaagaagtgctgtgaatgtg
agggaaggccaaggagttgttttgttatgtggaacacctttgcattccggtgagctcaca
ttcacctgggtcttcaacgagtaccctcacttcgtccaccaagacagccggcgctttgta
tcccaagagacggggaatctctacatagctaaagtggaaccatccgatgttgggaattac
acctgcgtggttaacaacactattaccaaggagagggtgttcagttcgccaacaccttta
gttctaagaaatgacggagcgatgggagagtacgagcccaaaatagagcttcatttcccc
gacaccattccagctgctaaaggatccacgctgaagctagaatgctttgccttgggaaat
ccagttcccaggataagctggagacgaaccagtgatgtttcgttcccaagcaaagtcaaa
ctgaaaaattctaacgccattctggagattccaagttttcaacaagaggacacagggaca
tatgagtgcatagcagaaaacagtcgtggaaagaatgctgcgaggggtcgtatgtctttc
catgccacccctcattggctgcagacgatgatggacaaatcattgtccattgaggagaat
ctgttttgggaatgcaaagccaatgggaaaccaaaaccctcgtacagctggctgaagaat
ggagaaactcttatatcagagggcagagtgcaaatagagaacggcgctctctcaatctcc
tcactaaacctctcagatggcgggatgtatcagtgtgtggcagagaacaagcatggcatc
atttattccagcgccgaactgatggtgcttgcctctgctcccagcttctcccagaatcct
ttgagccgagtgcttaaggctcgctcgggtagtgacgttagcttagattgcaggccacat
gcttcgcccagagccattagcctgtggaaaagagggactgagatactgcaaagaagcgaa
aggatttctctcttcccaaatgggactcttaagattgccaacgtaactaagcgagatgga
ggtacttacacatgcatcgctaaaaatcaatttggcacagctagcacaacaggaagactg
ataatcacagagcccacgaggatcagccagggccccagcagcacagagatcacggtgggt
gagagcatcgtgctgccctgccaggtgactgccgatccagccttggaagtggccttctcc
tgggccttcaacggtcagcccattgatttccatcaggacgccgaccacttcgagcgagtg
ggagggagcttttccggtgatcttatgattagaaacatccagcttaatcacggtgggaag
tatgtttgtctcatcgacacagacgtcgagagtttgtctgctgacgcaatattggttgtt
aaaggtgcccccagccccccagacttggttgtggtggaggaggtcacagacagcacggca
cagctgtcctggagcccaggccaggacaatggaagtcccattactggatatgtcatccag
gccaggactccctttactgtcggctggcaagctgtcgacacagttcctgaggtgatcaat
ggaaacactctgactgcaaccgtggtgggtttgaacgcttgggtggaatatgagttcaga
gtcctggccagtaacagtgtcgggatgggagagcccagtcccccgtctaccaagatcaga
acagaagatgctatgcctgacacggctcccactgatgttggaggcggaggaggtaccaaa
tcggaattagtgataacatgggagcctgttccagaggagttacaaaacggagagggcttc
ggttatatcatcgctttccggccagtgggaatggtcacttggacccgagccgtgatctcg
gcacccagcgtcacccgctatgttttccgaaatgacaccatcccaccattctcaccattc
aacatcaaagtgggagcgttcaacaaccgcggagaaggacctttcagcagcattgcaacc
gtgttctctgcagaggaagtgccgagcgtagcgccggagagagtgtcagcaaaaagtctg
tcggcggctgacatcgaagttacctgggagccaattgcgtcgacccctgaaagagttctc
ggatatgaggtggtgtactgggaagatgacaccaagccggatacagtgggtaaagtgcgg
atcactggaaactacacagcagtgaatgtcagcggcctgcaggggaacactcagtattat
atagcggtgtgtgccttcaataccgcaggaactggcccgcagtctgtacatgtcaatgtt
accaccaaaaaaccaccgcctggacagccccctcagaacgtagagtggaatctgattggc
tctcagctcgtgctgcagtgggatcccgtcatcgctctcgaaactgaatcggaggtcacg
ggatacatagtgctgtacagaagacaccggaataacgacatgtactccatcatcaccaac
aaaacctcggttgagttgaccctcaatccgaacgacaactacgtcattcagattaagacc
ctcagtgaaggaggcttgggggaaggaagcgagcccatccacatctaccaactcagcatg
ggtgcccgtggatccagagcaggaaggctgtgcacactttctctctctccgctcctcatt
tgtgctctgtcgacgctcagtgcctcctga
DBGET
integrated database retrieval system