Carassius auratus (goldfish): 113096378
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Entry
113096378 CDS
T07313
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113096378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113096378
03041 Spliceosome [BR:
caua03041
]
113096378
03032 DNA replication proteins [BR:
caua03032
]
113096378
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
113096378
Spliceosome [BR:
caua03041
]
Complex A
U1 snRNP components
Sm proteins
113096378
U2 snRNP components
113096378
Complex B
U1 snRNP components
113096378
U4/U6.U5 tri-snRNP components
113096378
Complex C
U2 snRNP components
113096378
DNA replication proteins [BR:
caua03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113096378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
ATP-grasp_2
TSP9
Motif
Other DBs
NCBI-GeneID:
113096378
NCBI-ProteinID:
XP_026117543
Ensembl:
ENSCARG00000023682
UniProt:
A0A6P6P946
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETTSGEVYRGKLIEAEDNMNCQMANITVTYRDGRVSQLEL
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQAAGAGRGKAAILKAQVAARGRGRGGGPGR
GNVFQKRR
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcggtgtgcccatcaaagtccttcatgaagcagagggacacatcgtcacctgt
gagaccaccagcggggaggtttacaggggcaaactgatcgaggctgaggacaacatgaat
tgccagatggcaaacatcacagtcacatacagggacggccgtgtatctcagctggagctg
gtgtatattcgtggcagtaagatcaggttcctcatccttccagacatgctgaaaaatgct
cctatgttaaagagtatgaagaacaaaaatcaggccgctggtgccggtcgaggaaaagcg
gctattctcaaagcccaagtggctgccagaggccgtggccgtgggggaggaccaggacga
gggaacgtgttccagaaaaggcgctag
DBGET
integrated database retrieval system
