Carassius auratus (goldfish): 113096436
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Entry
113096436 CDS
T07313
Name
(RefSeq) contactin-4-like isoform X1
KO
K06762
contactin 4
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113096436
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
Contactins
113096436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Sp38
Ig_C17orf99
V-set_CD47
Pur_ac_phosph_N
C2-set_2
Tissue_fac
Ig_6
NDNF
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
113096436
NCBI-ProteinID:
XP_026117606
Ensembl:
ENSCARG00000047197
UniProt:
A0A6P6P8T4
LinkDB
All DBs
Position
6:11516894..11636997
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AA seq
1058 aa
AA seq
DB search
MRRSEERETTERPPYLRDWMRVDFDHTKVKMKLLWKLLVLQSFLGSLAGNTLQSPVFTKQ
PGSIVFPVDSMEKNREVVFSCEAQGDPPPFYRWKLNGSLLNPKPGSHHSLSGGNLRINHL
NKDEDAGTYQCLASNSFGTIVSRESSLTFAYLENFKTHKRSSVSVREGQGVVLLCGPPPH
SGALTFSWIFNEYPSFVKQDSRRFVSQETGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQG
PPTPLILRNDGVMGEYEPKIEVQFPEIVQVAKGSTVRLECFALGNPVPSISWHRVDGVPF
TRKVDVRKTSGVMEIPYFQQEDAGTYECVAENTKGRNSVQGKLSFFASPQLIEKPQDVQK
AIDDSLVWECKATGKPKPSYRWMKNGENLEPTEERVQVINGALSITRLALSDIGMYQCVA
GNKYGEVYSNAELRVIAVAPDFSQNQLKSHTLVKEGGDVLIECKPKMSPRGMISWRKGND
ALRENSRIAILETGSLRISNVTKSDAGMYTCVARNQFGEASSSGNMIVKEPTIITTAPNT
LDVTVGESIILPCQVSYDPSLELKFTWFFNEQLIHFGSHGGYFEKVGGQHSAGDIMIRNI
QLRHAGKYTCAVQTKVDSSSIATDLIVRGPPGPPTSIHVEEITDTTATLSWRPGPDNHSP
ITAYTIQARTPFSLGWQAVSTVPEVVGGSHLTATVIELNPWVEYEFRVLASNAVGTGEPS
KPSKKARTKETVPKVTPANVSGGGGSRSELVITWEPVPEELQNGAGFGYVVAFRPFGATG
WMQAAVPSPEASKYVFKNETILPFSPFQVKVGVYNNKGEGPFGPVVTIYSAEEEPGRAPS
RLRAKSLSAFDVEVSWKALPWSTSKKRVLGYELRYWEKNEKEDTASVLRTVGNRTMAIIQ
GLKGSTTYYITVRAYNTAGTGPPSPAVNVTTKKPPPSQPPSKVMWNASNSKIILNWEQVK
PLENESEVMGYKVLYKRNQFSRPSIMETNTTSVELSLPMDEEYIIQIRPFGEGGEGSSSR
QITIPKISGPNAIGSASSVSTLSALSTIALSLTARTSL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgcggagaagtgaagaacgagaaaccacagagaggcctccataccttcgtgattggatg
cgagttgactttgaccataccaaagtgaagatgaagttgctatggaaactgctggttctg
cagtcattcctggggagccttgcaggcaacacgctgcagagccccgtgttcacgaagcag
ccaggcagcattgtgtttccagtagactccatggagaagaacagggaggtggttttcagt
tgtgaggcacaaggtgaccctcctcctttttacaggtggaagctaaatggcagcctgctc
aaccctaaacccggctcccatcacagcctctctggaggcaaccttcgcatcaaccatctc
aataaagatgaggacgctgggacgtaccagtgccttgcttccaactcctttgggactatt
gtcagcagggagtccagcctaacctttgcctatttggaaaacttcaaaacccacaagcgg
agttctgtgtctgtccgggaaggacaaggagttgtgcttctctgcgggccgccccctcac
tctggagctttgacgttctcctggatttttaatgagtacccatcattcgtgaagcaagat
tctcgccgattcgtgtcccaggagactgggaatctatacatcgctaaagttgagccatct
gatgtgggcaactacacctgtgttgtgaccaatactgtcaccaagacacgcgtccaaggg
ccgcctactcctctaatactgcgcaatgacggtgtaatgggagaatatgagccaaagatt
gaagtgcagtttccagagattgttcaagtggctaaaggttcaaccgtgcgtctggaatgt
tttgcactggggaatccagtaccgtccataagttggcatcgcgtggacggagtcccattc
actcgtaaagtggatgtaaggaaaaccagcggtgtgatggaaatcccttacttccagcaa
gaagatgcgggcacgtacgaatgtgtggcggagaacaccaaaggaagaaactctgtgcag
ggaaagctgtctttctttgcctccccccagctaattgagaagccccaggatgtgcagaag
gccatcgatgactctctagtgtgggaatgcaaggccacaggaaaacctaagccctcttat
agatggatgaagaatggagagaacctggagcccactgaggagagggtgcaggtcattaat
ggcgccctgtccatcactcgcctggcactctccgatattggaatgtaccagtgcgtggct
gggaacaagtatggagaagtgtactccaatgctgaactcagagtgatcgctgtcgctcct
gatttctcccaaaaccagctgaagagtcacactttagtcaaagaaggcggcgatgttctc
attgaatgcaaacccaagatgtctcctcgaggcatgatctcctggcgcaaaggcaacgac
gccctccgagaaaacagcagaattgctatattggagactggaagccttcggatatccaac
gtcaccaaatcggacgctggcatgtacacgtgtgttgcccgtaaccagtttggcgaggcc
agcagctcaggaaacatgattgttaaagagccaacaatcattacgactgcccccaacacg
ctggacgtgaccgtcggtgagagcatcattcttccctgccaggtgtcctacgatccctcg
ctggagctcaagttcacctggtttttcaacgagcagctcatccacttcggcagccatgga
ggatactttgaaaaagttggcggacagcactcggcaggtgacatcatgatccggaacatt
cagctgaggcatgctgggaagtacacgtgtgctgtgcagactaaagtggacagcagttcc
atcgcaaccgacctgatagtcagaggtccccccggcccccctaccagcatccatgtggaa
gaaatcacagataccactgccactctctcctggaggcctggtcctgataatcacagtcca
attactgcctacaccatccaggctagaacccctttctccctcggctggcaagctgttagc
acagtgccggaggtggtcgggggctcgcatctgactgctacagtcatcgagcttaacccc
tgggtggagtatgagttcagagtgttggcaagcaatgcagtgggcacaggagagcccagc
aaaccctcgaagaaagccaggaccaaagaaacagttcccaaggtcaccccagccaacgtg
agcggaggaggtggcagtcgatcagagttagtcatcacttgggagcctgttcctgaagaa
ctccagaacggagcagggtttggctatgtggttgctttccggccctttggtgccaccggg
tggatgcaggcggcagttccctctcctgaagcctccaaatacgtcttcaaaaacgagacc
attttacccttttctccattccaagtcaaagtgggggtgtacaataacaagggggaagga
ccttttggacctgtggtcaccatctactctgctgaggaggagcctggaagggcacccagt
cgactccgagccaagagtctttcagcgtttgacgttgaggtgtcctggaaggcccttccc
tggagcacaagcaagaaacgtgttctcggctacgagttgagatactgggagaagaatgag
aaagaagacacagctagcgtgctaaggacagtaggaaaccggacgatggccattattcag
ggcttaaaaggaagtaccacctattatataacggtgagggcctacaacacagcaggaaca
gggccaccgagtccagcagtcaatgttacaaccaaaaagcctccgcccagccagccgccc
tcaaaagtcatgtggaatgcatcaaactctaaaatcattctcaactgggaacaggtgaaa
cctctggaaaatgaatccgaggtcatgggatacaaggtactgtataagcggaaccaattc
agcaggcccagcattatggagaccaacaccacatcagtggagctctcgctgcccatggac
gaggagtacatcatccagatcagaccttttggagaaggaggagaaggcagcagcagccga
cagatcactattcccaaaatatcaggtcccaatgccatcggctcggcttccagtgtgtcc
actctctctgctctcagtacaatagctctctccctcacagctcgcacatctttatga
DBGET
integrated database retrieval system