KEGG   Carassius auratus (goldfish): 113096627
Entry
113096627         CDS       T07313                                 
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
  KO
K14961  COMPASS component SWD1
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:caua03036]
    113096627
Chromosome and associated proteins [BR:caua03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     113096627
    COMPASS/SET1 complex (yeast)
     113096627
    MLL-HCF complex
     113096627
    MLL3/MLL4 complex
     113096627
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40 WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_IFT140_1st EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_LRRK2 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_WDR11_1st Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 113096627
NCBI-ProteinID: XP_026117785
Ensembl: ENSCARG00000062828
UniProt: A0A6P6PB45
LinkDB
Position
Unknown
AA seq 536 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLSWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDM
DKVLVCPMKSAPVLLTLSDAKHVVLPVDDDSDLNVVAAFDRRGDYIYTGNAKGKILVLNT
NTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIPAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DAAGQNATPDDSSAHSGPGDKKQRQPSSDGGPPKKKIRTTTIELQGVPNDEVHPLLGVKG
DSKSKKKAAGRPKGSKGKDKDSPFRPKVCRDRAEGLGTPGNLVSSMYKPHEVHGLD
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgaatctggagttgctcgagtcgttcgggcagaattatccagaggaggctgatggcacg
ctggactgcatcagtatggctctgacctgtacgtttaaccgctgggggacgctgctcgct
gtcggctgtaacgacggacgcatcgtcatctgggactttctgacgcgaggaatcgccaaa
atcatcagcgcacacatacaccccgtctgctcactcagctggagcagagacggacacaag
ctggtcagtgcctccacagataacatcgtgtctcagtgggacgtcctgacgggagactgt
gaccagcgcttccgcttcccctcgcccatcctcaagctgcagtaccatccccgagacatg
gacaaggttctggtgtgtcccatgaagtctgctcccgtcctgctcacgctgtccgacgcc
aaacacgtggtgctcccggtggacgacgactccgacctcaacgtggtggcagccttcgac
cggcgcggagactacatctacaccggcaacgccaagggaaagattctggtgctgaacaca
aacacacaggacctggtggcgtccttcagagtgaccacaggaaccagcaacaccaccgcc
atcaaatccatcgagttcgcacgcaagggcagctgtttcctcatcaacacagcggaccgc
atcatccgcgtctacgacggccgcgagatcctgacctgcggcagagacggagaacctgag
cccatgcagaagctgcaggacctggtcaacaggacgccgtggaagcgctgctgtttctcg
ggtgatggagagtatatcgtggcaggatcggcgcgacagcacgcgctctacatctgggag
aagagcatcgggaacctggtgaagatcctccacgggacgcgaggagagctgctgctggac
gtcgcttggcatccggtgcgtcccatcatcgcctccatctccagcggcgtggtgtccatc
tgggcccagaaccaagtggagaactggagcgcgtttgccccggactttaaagagctggac
gagaacgtggagtacgaggagcgagaatcagagtttgacatcgaggacgaggacaagagc
gagccggagcagaccggagcggacgctgccgaggacgaggaggtggacgtcacgtccgtc
gatcccatcccagcgttctgcagcagtgacgaggagctggaggattataaagcgctgctg
tatctgcccatcgctccggaggtggaggaccctgaggagaacccgttcggtcctccaccc
gacgccgcgggtcagaatgccacgcccgacgatagctccgcccacagcggccccggcgac
aaaaaacagcggcagccgtcgtccgacggagggccacccaagaagaagatccgcaccacc
accatcgagttacaaggcgtcccaaacgacgaggtccatccgctgctgggcgtgaagggc
gacagtaagtccaagaagaaggcggcggggaggcccaagggatcgaaaggtaaagacaaa
gactctccgttcagacccaaagtctgccgggacagagcagaggggctggggacgccagga
aatctggtctcatccatgtacaagccgcatgaggttcatggtttggactga

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