Carassius auratus (goldfish): 113097049
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Entry
113097049 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: double-stranded RNA-binding protein Staufen homolog 1-like
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113097049
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113097049
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113097049
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113097049
mRNA cycle factors
Stress granule specific factors
113097049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Motif
Other DBs
NCBI-GeneID:
113097049
NCBI-ProteinID:
XP_026118066
Ensembl:
ENSCARG00000002703
UniProt:
A0A6P6PA19
LinkDB
All DBs
Position
6:12594241..12604707
Genome browser
AA seq
702 aa
AA seq
DB search
MSQLQFQAPGNPAPSAAPLQLAPPQPGFSIPCGAAPLPSESASHPLRNSALPSPSATPFC
NPTVSNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFSVRLTLGEQHWDAE
GTSIKKAQHSAATCALSQSTLPKPSHRSPRLPGKNPGGIYKGSEYNVTHTVELNALCMKL
GKKPIYKPIDAYQGMRPAFNYNIRAPDPYARSMQNYYYPFPPVGPVLYHMELSIGGQLFH
GKGRTRQAAKHDAAAKAIKYLQKEPIMQQLAEMDEEPEEENLNKSEISQVFEIALKRNMS
VNFEVLKETGPPHMKSFVVRVTVGEFSGEGEGKSKKIAKKLAAIAVLEELRKLPQLPVTD
KIPLRIKKKSKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYTLVTERGLPRRREF
VMQVSVGCQNAEGMGPSKKVAKRNAAEKMLELLGFKVPQPQPPKPALKTDEKAPAKKPGD
GRKVTFFEPGSVEKTGLAVNKEENFRVPFHSHQQLPAGILPMVPEVAQAVGANQGPHAKD
YGHTAAPNPAKATVTAMIANELLYAGTSPTAEGILKTNNSLAHRPHGPLTRPSEQLSYLA
TIQGLQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELD
QQSNERTANGPMTGCNKQDLEGDALLKPANSSTIRKTLDGTV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcttcagttccaggcacctggcaaccctgcacccagtgccgcccctttacag
ctggccccgcctcaacccgggttcagcattccctgtggtgccgctcctttaccctcagag
agtgccagtcacccgctccgaaactccgccttgccttctccctccgccacgcccttctgc
aaccccacagtatctaacatggcaaaccctaaagagaagacccctatgtgtttggtaaat
gagttagcccgttacaataagatccaacctgaatacaagctactcagtgaacaaggacca
gcccactccaagattttctcagtgcggttaactctgggggaacagcactgggatgccgag
gggaccagtatcaaaaaagcccagcactcagcagcaacatgtgctctctcccaaagcact
ctccccaaacccagtcacagaagcccccgcctcccaggcaagaacccaggtgggatctac
aagggctcagagtataacgtaacccacactgtggagcttaatgcactttgtatgaagttg
ggcaagaagcccatctacaaacctatagatgcctaccagggaatgagaccagcgttcaac
tacaacatcagagcaccagacccttatgcacgctccatgcagaattattactacccattt
cctcctgtggggccagtactgtatcatatggagctgtctatcggtggacaactgttccat
ggcaagggccgcacgcgtcaagcagccaaacatgacgctgcggctaaagctatcaaatat
ctgcagaaagagccaataatgcagcagctagctgagatggacgaagagccagaagaagaa
aaccttaacaaatccgagatcagccaagtgtttgagattgcactgaagcgcaacatgtct
gtgaatttcgaggtgctaaaagagactgggcctccccacatgaagagttttgtggtgagg
gtaactgtgggtgagttttcaggggagggtgaaggcaaaagcaagaagatcgccaagaaa
ctagctgccatcgctgtcctggaggagctccgcaaactgcctcaactacctgtcactgac
aagataccactacgtattaaaaagaaaagcaagtccattattaagctgcagaccagccct
gagtacggtcagggcatgaaccccatcagcagactggctcagatccagcaggctaagaaa
gaaaaagagcctgagtacactttagtgacggagagaggactgcctcgacgcagggagttt
gtcatgcaggtgtcagttggatgtcagaatgcagagggaatgggacctagtaaaaaagtg
gccaagcgaaatgcagccgagaagatgctggagcttctgggcttcaaagtgcctcagcca
caaccacccaaaccggcactgaaaacagacgagaaggcacctgctaagaaacctggcgat
ggacgtaaagtgaccttctttgagccgggctctgtggagaaaaccggtcttgcagtcaat
aaggaggagaatttccgagttcccttccacagccatcagcagcttcctgctggcatttta
cccatggtgcctgaggtggcacaggcagtgggtgccaaccagggaccccatgccaaagac
tacggtcacacagctgcccccaaccctgccaaggccacggtaacggccatgattgccaat
gaactgctgtacgccgggacgtccccgactgcggagggtatactgaagaccaacaacagc
ttggcacacagaccccacggaccccttaccagaccatcagaacagctcagctacctggcc
actatacagggcttacaggttgaatacaaagactttcccaaaaacaacaagaatgagttt
gtgtctctgatcaactgctcctctcagcctcctctcatcagccacggcatcggcaaggac
gtggagtcctgccatgacatggctgctctgaacatcctgaagctcctgtcagaacttgac
cagcagtccaatgagcgcacagctaatggaccaatgacagggtgcaacaaacaagacctc
gagggtgatgcattattaaaaccggctaactcaagcaccatcagaaagactctggacggc
acagtatag
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