Carassius auratus (goldfish): 113097521
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Entry
113097521 CDS
T07313
Name
(RefSeq) huntingtin-like isoform X1
KO
K04533
huntingtin
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113097521
04131 Membrane trafficking [BR:
caua04131
]
113097521
03029 Mitochondrial biogenesis [BR:
caua03029
]
113097521
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113097521
Membrane trafficking [BR:
caua04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113097521
Mitochondrial biogenesis [BR:
caua03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
113097521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
HEAT_2
Vac14_Fab1_bd
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
113097521
NCBI-ProteinID:
XP_026118534
Ensembl:
ENSCARG00000053440
UniProt:
A0A6P6PD01
LinkDB
All DBs
Position
Unknown
AA seq
3186 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPLSAEELVQKQKKDPATTKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDKESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNAASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRITKRQEETVQETLSSSIPKI
MAALGHFANDGEIKMLLKAFVANLKSSSPTIRRTAACSAVSVCQHSRRTHYFYTWLLNVL
LGLVVPVDEEHSSHLILGALLTLRYLMPLLQQQTPNTSLKGSFGLVRKEADVTPTPEQLI
QVYELTLHYTQHWDHNVVTASLELLQQVFRTPAPELLNALSTRGKISHTSVFREETESRA
RSGSILELIAGGSTCSPLLLRKQKGKLLSGEEEGLEDDPERAEVTTGSFSASVGGDSSSE
APSSSGVSSLGTSDIITEQPRSSQHSLQPGDSVDLSASEQGVGPDTPDEEDEEDMLSRSS
SGGAGVVSTSGDLVSEGNQMSIGAVSSSPPSDSSQTTTEGPDSAMTPSDCAELVSVTSTS
RRCRNYSPPSPTPTEGPDPHSDSESSLYRPSSSSSSSTSTSSSTFSAISSSSSSEQVSRG
QGVLDGSESQYSGMQIGTLQDEEEEGTAPPPDKIPFSQSALALSKPHLLEGKGHNRQSSD
SSVDRFIPKEEVLEPAELNNKPSRIKGDIGHYTDPKEEPLVHCVRLLAASFLLTGQRNGL
VPDNEVRVSVKALAVSCVGAAATLLPEAFFNKLYLQPVNGQQPDEQQYISDILQYIEHGD
PQIRGATAILCGALIQAIHLKTRYNTDAWLSQIHSFTGNSVTLENFVPLLQRSLKDKSSV
TCKMACAAVRHCIMALCNGSLSELGLQLLIDLLTLKDCSYWLVRTELLETLAEIDFRLVG
FLESKTEKLHKGEHHYTGLLRLQDRILNNVVIYLLGDEDPRVRHVAANTISRLVPRLFYD
CDQAQTDPVVAIARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYNLGQSAPDVTVENN
LSRVITAISHALTSSTSRAVTFGSCEALCLLSRTFPVCTWSTGWHCGFVSSSVFHLNRSS
QYRSRGRSFSLSQPGASEDMRRSLTVGVASMVLSLISSAWFPLDLSAHQAALLLAGNLLA
ATAPKCMKSPWAGEEESNPAPPKVEEAWPALNDRSLVVMVEQLFSHLLKILNICAHVLDD
TPPGPAVKATLPSLGNTPSLSPIRRKGKEKEMMEPSTTPMSPKKGGEANTGRAADSTATP
AVNKSTTLGSFYHLPSYLKLYDALRATHANYKVTLDLHNTNEKFGSFLRSTLDVLSQLLE
MATLHDIGKCVEEILGYLKSCFSREPTMATVCVQQLLKALFGTNLASQYEGASSHPCRTQ
AKALRLGSTSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEQDASGWFDVMQKVSN
QLRSSITNVTRHRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQRQVLDLLAQLVQLR
VNYCLLDSDQVFIGFVLKQFEFIEVGQFRDSEEIVPSIFFFLVLLSYERYHSKQIISIPK
IIQLCDGIMASDRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELETQKEVVVSMLLRLI
QHHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMIGKQQMHLDSHEALGVLNTLFE
TVAPSSLRPVDMLLKSMFITPSTLASVGTVQLWVSGILAILRVLISQSTEDIILSRIQEL
SLSPYLLCCPTIRRLRDDDPSPPEALPPAMEDANGEPQRVLPEETFARFLLQLVGVLLDD
VATKQVKVEMSEQQHTFYCQQLGTLLMCLIHIFKSGMFRRITAAGSRLLKAEGGEGGSFY
TLEGLNSLVLQLITTHPSLVLLWCQVLLIINYTNYTWWSEVHQTPRRHSLSSTKLLSPHS
SGEEERPEGKLAMCNREIVRRGALILFCDYVCQNLHDSEHLTWLTVNHVSDLISLSHEPP
VQDLISAVHRNSAASGLFIQAIQSRCDNLSTPVMLKKTLQCLEGIHLSQSGALLMLYVDK
LLNTPFRVLARMVDTLACRRVEMLLAETLQNSIAQLPLEELDRIQQYLQTSGLAQRHQRF
FSLLDRFRATIAEDSTSPDAPITSHPLDGDPPPPPENVEPNKEWYVELVKFQCCLRGEGA
LYETTELLTKLPQSDLNTIMTCKDFNLCLLASCLSVGVQRVCKGHGTVLFDTAQQVAFER
LAGVIELLPSPHQPLLLSSKTCADYWQQLNQVYSEPGFYQTVLSLCGVLSQYLLSLSKLP
SLLHIPKDRETLITTFSTLVIEVVVWRLLQDQLPLSVDIQMSLSCLSLALQQPAVWTHFA
SHTYLTHTCSIIHCIQLLIHAVAVGPGDQLLRPERKTEQSEDELDSADKQLEWRCCEIMA
ELVEGLQSVLALGHHRNKNIPAFLTPTLRNVIISLARLPIVNSYTRIPPLVWKLGWSPRP
SGEFGTALPEIPVEFLQEKDVFREFLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQ
EEETQQEEDMERTQINVLAVQAITSLVLSAMTLPTAGNPAVSCPEQQPRNKILKALDTRF
GRKLSVVRGMVEREIQAMVSKRDNIATHFPYQAWDPVPSLSSSTAGTLISHEKLLLQINT
EREIGNMDYKLGQVSIHSVWLGNNITPLREEEWGEDEEDEADAPVPASPPVSPINSRKHR
AGVDIHSCSQFLLELYSQWILPGSPSSRKTPVVLLSEVVRSLLAVSDLFTERNQFDMMFS
TLTELQKVHPPEDEILNQYLVPAICKAAAVLGMDKAIAEPVCRLLESTLRSTHLPSRIGA
LHGVLYVLECDLLDDTAHQLIPTVSEYLLSNLRATAQCVNLHNQQHVLVMCAVAFYMMEN
YPLDVGSDFNAGIIQICCMMLSASEEATPSIIYHCVLRGLERLLLSEQLSRMDAETLVKL
SVERVNMPSPHRAMAALGLMLTCMYTGVAGEEGKEKGSPGRPADADPTAPDSESVIVAME
RVSVLFDRIRKGFPSEARVVARILPQFLDDFFPLQDVMNKVIGEFLSNQQPYPQFMATVV
YKVFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISALLPHV
ISRMGKSDTVDISLFCLVAMDFYRHQIDEELDRRAFQSVFEMVASPGSPYHQLLCCLQSI
HLDTPL
NT seq
9561 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgatgaaagcgttcgagtcgctcaaatcattccagcagcag
caaggcccgctgtcggccgaggagctcgtccagaaacaaaaaaaagaccctgctacaacc
aaaaaggaccgagtgactcattgcctgacgatatgtgaaaacatcgtggcacagtcgctg
aggacatctccagagttccagaaacttctcggaattgcgatggaaatgttcttgttgtgc
agcgacgacaaggagtctgacgtcaggatggtggcagatgagtgcctcaacaaaatcatc
aaagcattgatggattccaacttgcccaggctgcagctggaactgtacaaagagattaaa
aagaacgctgcctctcggagcctgcgggcagccttgtggaggtttgctgagcttgctcac
cttgtgcgtcctcagaaatgcaggccgtatcttgtgaatctgctgccatgtctgacacgg
atcactaaacgtcaggaggagactgtgcaggaaactctttcttcttcaattcctaaaatc
atggctgccctgggacactttgccaatgatggagagatcaagatgctgctgaaggcattt
gttgccaatctgaagtccagttctcccactattcggcgaacagcggcctgctcggctgtc
agcgtgtgtcagcactcacgcagaacacactacttctacacctggctcctcaacgtgctg
ctcggtttggtagtgccggtggacgaggaacattccagtcacctgattctaggtgcatta
ctgacgttgcgctacctgatgccccttcttcagcagcagactcctaacaccagtctgaag
ggcagctttgggctcgttcgtaaagaggcagatgtcacccccacacctgagcagctcatt
caggtctatgaactgaccctgcactacacgcagcactgggatcataatgtggtgaccgca
tctctggagcttctgcagcaggtgtttcgtactcctgcccctgagctcctcaacgcactc
agcacacggggcaagatatcacacaccagtgtcttcagagaggagaccgagagccgtgca
cgcagtggcagcattctcgagcttattgccggtgggtcaacatgcagtcctctcctcctc
aggaagcagaaaggtaagctgttgtcaggtgaagaagagggtttggaggatgaccctgag
agggcagaggtcaccacaggatcattctctgcctcggttggtggcgacagctccagtgaa
gcaccctcctcatcgggcgtttcgtcacttggcacatctgacatcatcacagagcagcca
cgctcctcccagcattccttgcagccgggagactcagtggacctgagtgcgtcagagcag
ggtgtagggcctgatactccagatgaggaagacgaggaggacatgctaagtcgcagctca
agcgggggcgccggggtcgtcagcacgtctggtgacttagtaagcgaaggcaaccagatg
tcgataggagccgtgtcgtcgtcgccccctagtgacagttcccagacgactacggagggg
ccggactccgccatgacgccttcagactgcgccgagctcgtaagtgtcaccagcaccagc
agacgctgtcggaactattcaccaccttccccaactcccactgaagggccggacccgcac
tccgacagcgagtcgtctctctacaggccatcctcctcctcctcctcctctacctcgact
tcttcctccaccttttctgccatctcttcctctagcagtagtgagcaggtcagcagagga
cagggggtgctggatggcagtgagagtcagtactcagggatgcagatcggcacactgcag
gatgaggaggaggagggcacagctccaccacctgacaaaatacctttctctcagtcagca
ctggctttaagtaagccccatcttctggagggaaaaggtcacaacaggcaatcatctgat
agcagtgtggatcgattcataccaaaggaagaagttctggaacccgcagaactcaacaac
aagccatctaggattaaaggagatattggtcactatactgacccaaaggaagagcctctg
gtgcactgtgtccggctgttggctgcctcctttctgctcaccggccaaagaaatgggctg
gttcctgataatgaggtccgtgtgagcgttaaggcgttagccgtcagctgtgtgggggca
gcagcgactcttctacctgaagccttctttaacaaactctacctgcagccagtaaatgga
caacaaccagacgagcaacagtacatcagtgatatactgcagtacattgaacacggggat
cctcagatcagaggagccacagccatcctgtgtggagctttaatccaagccatccacctc
aagacacgctacaacactgacgcatggctgtcccagatccactccttcacaggaaactct
gtgacactagaaaactttgtgcctctcctgcagcgaagtctgaaagataaatcttcagtc
acgtgtaaaatggcatgtgctgctgttaggcactgcatcatggcgctgtgcaatggaagt
ctaagtgaacttggcctgcaactactcattgatctgctgacgttgaaggactgctcctat
tggctggtgcgcactgagcttttggagacgcttgctgagatagatttccggttagtaggt
tttttggagagtaaaactgagaagttgcacaaaggagagcatcactatactgggttgttg
aggctgcaggacaggattctgaacaatgttgtgatttatctactgggcgatgaggaccct
cgtgtgagacacgtggcagcaaacaccatcagcaggttggtgcccaggttgttctatgac
tgtgaccaggctcagacagacccggttgtggccatagctcgagatcagagcagtgtgtat
ctgcagctgctaatgcacgagacgcagcctccatcacaattcactgtcagcactattaca
cgaacataccgtggctacaatctgggtcagagtgcaccggatgttactgtggagaacaac
ctgtctcgggtcatcactgccatctctcatgccctcacttcctccacttccagagccgtg
acttttggcagttgtgaggctctctgccttttgtccaggaccttcccagtgtgcacttgg
agcacaggctggcattgtggttttgtgagctcctctgtctttcatctcaaccgctccagc
cagtaccgcagccgtggacgctcctttagtctctctcagcctggtgctagtgaggacatg
cgccggtctctgacggtcggtgtggccagtatggttttgtctctcatctcctctgcctgg
ttccctcttgatctctctgcccatcaggctgctctgctactggctggaaatcttctcgct
gccactgcaccgaagtgcatgaagagtccatgggcaggagaggaggagtctaaccccgcc
cccccgaaggtggaggaggcgtggcctgctcttaacgaccgctctctggttgttatggtg
gagcagctgttctcacaccttctgaagatcctcaacatctgcgcccatgtgctggatgat
actcccccaggccctgcagtcaaggctactttaccctcactgggcaacactccttctctc
agtccaatcagacggaagggtaaagagaaggagatgatggagccgagcaccacccccatg
agcccaaagaaaggaggagaagccaacacaggcagagcagcggacagcactgcgacacca
gcggtcaacaaatccaccactctgggcagcttttatcacctcccttcttatctgaagctt
tatgatgcactgagagctacacatgctaactacaaagtcacgttagaccttcacaacacc
aatgagaagtttgggagtttcctgaggtcgacgcttgatgtcctttcacagctgcttgag
atggctaccctgcatgatattggcaaatgtgttgaagagatcctgggctacctcaagtcg
tgtttctctcgggaacccactatggccactgtgtgtgttcagcagctgttgaaggcgttg
tttggcaccaatcttgcatctcagtatgagggggcttcttctcacccgtgtcggacccag
gccaaggccctccggctcggctcgaccagtgtcagacctggcctctaccattactgcttc
atggccccatacactcacttcacccaggccctcgcagatgccagcctcagaaacatggtg
caagctgaacaagaacaggacgcatctgggtggtttgatgtcatgcaaaaagtctcaaac
cagttgaggtcaagtatcaccaatgtcactcgccaccgaggagacaagaatgccattcat
aatcacatccgtttgtttgagccgctggtgataaaggctctgaagcagtacaccaccagc
acctcagtggccctacaaagacaagtgctggaccttctcgcccaacttgtgcagctccgg
gtcaactactgtttgcttgattcagaccaggtattcatcggtttcgtgctgaagcagttt
gagtttattgaagtggggcagttcagggactctgaagagatcgtgcccagtattttcttt
ttcctggttctgctgtcctatgagcgctaccactccaaacagatcatcagcatcccaaag
atcattcagctgtgtgatggcatcatggccagcgacaggaaggcagtaacacacgcaatc
cctgctctgcagccgatagtacatgacctctttgtgctgcgtggctccaataaagcagat
gcagggaaggagctggagacacagaaggaagtggtggtgtccatgctgctgcgcctcata
caacaccatcaggtgctggagatgtttattctagtcctacagcagtgccataaagagaat
gaagataaatggaagaggctttcacggcagattgctgacatcatactgccaatgatcggc
aaacagcaaatgcacctggactcccatgaggcattgggcgtgttaaacacactgtttgag
accgtggctccctcctctctgcggcctgtggacatgctactgaagagcatgttcatcaca
ccttctacactagcatcagtgggtacggtgcagttgtgggtttctgggattcttgccatt
ctgcgtgtgctcatctcacaatccacagaggacatcattctgtctcgtattcaggagctt
tctctgtcaccgtacctcctctgctgtcccaccatccgtcgactgcgggacgatgacccg
tcccctcctgaagctctgccccccgccatggaagacgccaatggggagccgcaacgtgtc
cttcctgaggaaacttttgctaggttcttattgcagttagtgggggtgttgctggatgat
gtcgccaccaagcaagtgaaagttgagatgagtgaacaacagcacacgttctactgtcag
cagctgggcacactgctcatgtgtttgatccacatcttcaaatcaggaatgttccggcgg
atcacggcagcgggcagcaggctgctgaaggccgagggaggtgaagggggtagtttttat
accttggagggtttgaacagcctggtgctccagctcatcactacacacccgtctctggtc
ctgctctggtgtcaggtcctgctcatcatcaactacaccaactacacctggtggtccgag
gtgcatcagacccccaggaggcacagtctgtccagcactaagctgctgagcccgcactca
tctggagaggaagagaggcctgaagggaagctggctatgtgtaacagagagatcgtccga
cgaggagcacttattctcttctgtgactacgtgtgtcaaaacttgcacgactctgagcat
ctgacgtggctgacagtgaatcatgtgagcgatctgatcagtctttcccatgagcctcca
gtgcaggatctcatcagtgctgtgcaccgaaattctgcagccagcggactcttcatacag
gctattcagtcacgctgtgacaacctttccaccccggtaatgctgaagaagaccctgcag
tgtttagaaggcattcatctaagtcagtctggggctctgctcatgctttatgtggacaag
cttctcaacacgccgttccgtgtgctggctcgcatggtggacacactcgcctgcagacgt
gtggagatgctgcttgctgagaccctgcagaatagtattgctcagctgccactggaggag
ctggacaggattcagcagtacctgcagaccagtggacttgcccaaaggcatcagcggttc
ttctccctgctggacaggttcagagccactattgctgaagacagcacgagccctgatgcc
cccattacctcacacccactggacggggacccaccccctccccctgaaaatgtggaaccc
aataaggagtggtatgtcgagctggtgaaatttcagtgttgtttgagaggtgaaggagct
ctgtatgaaactacagagctgctgacaaaacttcctcagtctgaccttaacacgatcatg
acctgcaaggactttaatttgtgtctgctggcatcatgtctgagtgttggggtacagagg
gtgtgtaagggtcatgggacggttttatttgacacagctcaacaggtggccttcgagcga
ttggctggtgtcatagagctcctcccctcccctcatcagcccctcctactctcctccaaa
acgtgtgcggactattggcagcagcttaatcaagtctacagtgagcctgggttttatcag
acagtgttgagtctgtgtggtgtgttgagtcagtacctgctgtctctgtccaaactaccg
tccttactgcacattcccaaagacagagagacgctcattaccaccttcagcaccctcgtc
atagaggtggtagtttggcgtttgctgcaggatcagctgcctctgagtgtggacattcag
atgagtctgtcgtgtttgagtctggctctccagcagccggcggtgtggacacactttgcc
tcccacacctaccttacacacacctgctccatcatccactgtatacagctcctcatccac
gcagttgcggttggtcctggtgaccagcttcttaggccggagcggaaaacagagcagtca
gaagatgagttggactctgcagataaacaactcgaatggcggtgttgtgagatcatggcc
gagctggttgagggtctgcagagtgtgctggctttgggtcaccacagaaacaagaacatc
ccagcattccttacacctactctacggaatgtcatcatcagcctggccaggctgcccatt
gtgaacagctacacccgaatcccacctctggtctggaagctgggctggtcccccaggccg
agtggagaatttggcacagcattgcctgagatccctgtagagttcctgcaggagaaagat
gtcttcagagagttcctctaccgcattaatactctgggttggagcagtcggacacagttt
gaggagacatgggccactctgttgggagtgctggtcactcagccaatcacgatggaccaa
gaagaagaaacccagcaagaggaggatatggagaggactcagatcaatgtactggcggtt
caggccatcacctctctggtgttgagtgccatgactctgccgacagcaggaaatccagcc
gtcagctgccctgaacagcaaccccggaacaaaatccttaaagctctggacaccaggttt
ggtcgtaagctgagtgtcgttagaggtatggttgagcgtgagattcaagccatggtgtca
aagagagacaacatcgccacacacttcccctatcaggcctgggaccccgtgccatcctta
tcatcctcaacggcaggcaccctcatcagccatgagaaacttctgttgcagattaacacg
gagagggagattggcaacatggactacaaactgggtcaagtgtcaattcactcagtttgg
ttgggaaataacatcacccctctgagggaggaagaatggggtgaggatgaggaagatgaa
gcagatgctccagtgcctgcttcaccaccagtatcgcctatcaactccagaaagcaccgt
gctggggttgacatccattcctgctctcagttccttctggagctctacagtcagtggatc
ctccctggcagccccagtagtagaaagactcctgttgtgctcctcagtgaagtggtcaga
tcgctgctggcagtgtctgatctcttcaccgagaggaatcagtttgatatgatgttctcc
actctgactgagctgcagaaggtccatccaccagaagatgagattctcaaccagtacctc
gtgccagctatctgcaaagcagccgcagtgcttggcatggataaagccatcgcagagcct
gtgtgccgtctgttggagagcaccttgcgcagcactcatctgcccagtcgaattggcgct
cttcacggcgttctatacgtgctggagtgcgacctactggatgatacggcacaccagctt
atacctaccgtcagtgaatacctgctctctaaccttagagctacagcacaatgtgtgaat
ctacacaaccagcagcatgtgctagtgatgtgtgcggtggccttctacatgatggagaac
taccccctggatgtagggtccgatttcaatgccgggattattcagatatgctgtatgatg
ctgtctgctagtgaggaggccacaccatccatcatctaccactgcgttctgcgaggtctg
gagcgcttgcttttgtctgagcagctgtcacgcatggacgcagagacgctagtgaagctg
agcgttgaacgtgtgaacatgcccagcccacaccgtgccatggctgccctgggtctcatg
ctcacctgcatgtacacaggtgtggctggagaggaaggaaaggagaagggaagtcctggg
cgccctgctgatgcagaccccacagctcctgacagcgaatcggtcattgttgcaatggag
cgcgtatccgtcctgtttgacaggattcgcaaaggctttccaagtgaggcgcgtgtggta
gcccgcatccttcctcagttcctggatgactttttcccactgcaggacgtcatgaacaaa
gtcattggggagttcttgtccaatcagcaaccttacccacaattcatggctacagtggta
tacaaggtatttcagacacttcatgcgactgggcagtcctccatggtgcgtgactgggtg
ctactctcactgtcgaacttcacacagaggacgcctgtcgccatggcaatgtggagcctg
tcttgtttctttgtcagtgcctcgaccagccagtggatatctgcactcctgccgcatgtc
atcagtcgcatggggaagtccgacacagtagatattagcctcttttgtctggtagctatg
gatttctaccgacaccagatcgacgaggagttagaccgcagggccttccagtcggtcttt
gagatggtggcttcacctggtagtccatatcaccagttactttgctgtttgcagagcatt
cacctagacacgccactataa
DBGET
integrated database retrieval system
