Carassius auratus (goldfish): 113097601
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Entry
113097601 CDS
T07313
Name
(RefSeq) runt-related transcription factor 1-like isoform X1
KO
K08367
runt-related transcription factor 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113097601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113097601
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
113097601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
113097601
NCBI-ProteinID:
XP_026118680
Ensembl:
ENSCARG00000059816
UniProt:
A0A6P6PDY6
LinkDB
All DBs
Position
1:complement(19165188..19216524)
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AA seq
511 aa
AA seq
DB search
MHRIQGQNRLAGPVQGDHGFQGQSREPFKIREQIKLEALDSDEEEKQQPTTMASNSIFES
FPSYQSCFSREPVPGRRFTPPSTTLSSGKMNEGLPLGAQENSGAALVGKLRMADRSMVEV
LSDHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTVMAGNDENYS
AELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDGPR
EPRRHRQKPDEAVKPGALAFSEQLRRSAMRCSPHHGPAPNPRPALSTPPFSSPAHSQISD
SRQMQTSPSWSYEQPYPYLGPISTPAVHPTTPISPSRSALHCPDLTAFTDPRVSLERSFP
SLPSLPDGRFSDPRVPYPTGAFTYTPTPVTNAIGIGMSAMASPAGRYHTYLPPAYPAGSS
QAQAGPFQAGSSPYHLYYSSAAGSYQFSMMPGGGGGGERSPPRILPPCTNASTGSALLHP
SLPNQSEVVEAEGSHSSSPTSMSVEAVWRPY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaatccaaggacagaaccgcctggctggaccggtgcaaggcgaccatgggttt
caggggcaaagccgggagcccttcaaaattcgggagcagatcaagttagaagcattggat
tcggacgaagaggagaagcagcagccgaccacaatggcctcgaacagcatcttcgaaagt
ttcccgtcctaccagtcttgcttctccagggaacctgtgcctgggcgacgcttcacgcct
ccctcaacaaccctgagctcggggaagatgaatgaggggttgcccctaggggctcaggag
aacagcggtgccgccctggtgggcaaactccgcatggctgaccgaagcatggtggaggta
ctttccgaccaccctggagagctggtgcgcaccgacagccccaatttcctctgttctgtc
ctgccaacacactggcgctgcaacaagacgctgcccattgccttcaaggtagttgccctt
ggtgacatccctgatggcacgctagtcaccgtgatggccggcaatgatgagaattactct
gccgaacttcggaatgccacagctgccatcaagaaccaagtggcccgttttaatgatctg
cgttttgttggccgcagcggacgagggaagagtttcactctcaccatcacggtcttcaca
aaccctcctcaggtggcaacataccagcgagccatcaagattactgtagacggaccccgc
gaaccccgacgccaccgacagaagcccgatgaagcagtaaagccaggcgcgttagctttc
tctgagcaattgaggcgaagtgccatgcggtgcagtccacaccacggccctgcccccaac
ccccgtcccgccctcagcactccccccttcagcagtcccgcccacagccagatttccgat
tctaggcagatgcaaacgtctccatcctggtcgtacgagcagccgtacccttacctgggt
cccatctccaccccagcggttcaccccactacacccatctcacccagccgcagcgcttta
cactgtccagatctgacggcgttcactgaccctcgtgtcagtctggagcgttccttccca
tcgctcccctccctcccagacggccgtttctcggacccacgggttccgtacccaaccgga
gcgttcacgtacacacccacccccgtcaccaacgccatcggcattggcatgtcagccatg
gccagcccagcgggccgctaccacacatacttacccccagcataccctgctggctcctcc
caggctcaggccggacccttccaggccggctcgtccccatatcacttgtactacagcagt
gctgccggctcttaccagttctctatgatgccaggcggaggaggagggggcgagcgctcg
ccgccgcgcatcttaccgccttgcaccaacgcctccacaggctctgccctcttgcacccc
tctctgcccaatcagagcgaggtggtggaggcagagggaagccacagcagttcaccaacc
agcatgtcagtggaagccgtctggaggccgtattga
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