Carassius auratus (goldfish): 113098201
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Entry
113098201 CDS
T07313
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113098201
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113098201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113098201
NCBI-ProteinID:
XP_026118977
UniProt:
A0A6P6PDK3
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTNTGHTGPNGGSKVNQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLAGSGGGGGVGLGMGASGVGQRLESPVGHGGGTAASYAHMNGWTNGAYSAAAA
AAMMQEAQLAYSQHPGSGAHHHHSHHHHPHNPQPMHRYEMTALQYSPISNSQSYMSASPS
GYGGISYAQHQNSSVASSGAIGALGSLVKSEPSVSPPVTAHSRAPCPGDLREMISMYLPA
AEAGDPSVQSRLHAVPQHYQSSATSVNGTVPLTHI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggacttgcattccccaggaccccagactaacacaaac
acgggccacacgggccccaacggaggcagcaaagttaaccaagaccgcgtcaagagaccc
atgaacgcgtttatggtgtggtctcggggtcagcgcagaaaaatggctcaggagaaccca
aagatgcacaactcggagatcagcaagcgcctcggagcggagtggaaagtcatgtccgag
gcggaaaaacgacccttcattgacgaggcgaaaagactgcgcgccatgcacatgaaggag
catccggattacaagtaccggccccggaggaagactaagacgctgctcaagaaggacaag
tattctttggccggtggcctgctcgccggatccggtggcggaggcggcgtgggtctggga
atgggtgcgtcgggggtcggccaaaggttggagagtccggtgggtcacggcggaggcacc
gcggcgagctacgcgcacatgaacggctggaccaacggtgcgtactcggccgcggctgca
gccgcgatgatgcaggaggctcagctcgcctacagccagcacccaggctccggagcgcat
caccaccacagccaccaccaccatccacacaatccccagcctatgcaccgctacgaaatg
acggctctccagtacagccccatctcaaactctcagagctacatgagcgcctcgccgtca
ggctatgggggaatatcctacgcgcaacaccaaaactccagcgtggcttcttctggggcc
atcggcgcgctgggctcgctggtgaaatcggagccgagcgtaagtcctcccgttacagct
cactctcgagccccttgtcccggagacttgcgagagatgataagcatgtatttaccggcg
gcggaggcaggggacccgtcagttcagagcagacttcacgctgtaccgcagcactatcaa
agttccgcgacgagcgtaaacggaaccgttccactgacacacatatga
DBGET
integrated database retrieval system
