Carassius auratus (goldfish): 113098250
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Entry
113098250 CDS
T07313
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113098250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113098250
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113098250
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113098250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4
zf-B_box
zf-C3HC4_2
ANCHR-like_BBOX
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
113098250
NCBI-ProteinID:
XP_026119052
Ensembl:
ENSCARG00000001262
UniProt:
A0A6P6PDV5
LinkDB
All DBs
Position
6:15532180..15541996
Genome browser
AA seq
702 aa
AA seq
DB search
MAENMSLLGLEDELTCSICLCLFENPVSLICGHSFCANCLEATWNDRVSSLSCPQCRMVF
TSKPELKKNTVLSAVLDAYRIKAGVSEPVKEHFEVKMKDPDVIKCDNCMEAKAVKTCLTC
MASYCEEHVRPHRENAIFRAHQLSDPLPDLMERLCSDHGKLMEFYCNQHQNSMCSTCLQE
MHKGCEFITADERRFKQKTDLTDKLNILDVKMDKNQQVITQMKEQQVKLKDLATTRKRFL
ETEYRQIREMIDRDEKEAMLTIDKEQEKGQSKLVTMIKKFNENIEKMSRTKSEINILLDQ
SQSLAFIKASVDLPSVVNFEPHNPRVNVESKEVIAYHSSAVALKEWITRLMEQPLENRIS
LLKPEFEKSVLGAVKESPIPSVPHIKDPIRQNAFFPVRGNQFPGIPSEIPPLLPNPRDLW
MQKAPVAWFDPSALLISPSPTCGPKAKAPGTKQKNFSKPAKDQKDRKDQKPNRSRNPSKG
ANPVFSKSMENLLDITVKTVDIPDINPPAVSPDVLNSVKRSDLLKYGTILNFDVRTAHKR
ILLTENNTKATVSDDPAHYPDIPLRFSVCSQVLCTKGFSQGRHYWEIKMSSNNFCGLGLA
YGRIDRKGPSSRLGRNADSWCVEWFNVKLSAWHNSIETVLQNPNPSRVGVLLDCDQGSAT
FYNVQDRAYPFHTFVFPFIEAVYPAFWIFSNTSSVTLCKLNN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaatatgtctctgctgggtcttgaagacgaattaacatgcagtatctgttta
tgtctattcgagaacccggtgagtttaatctgtggacacagtttctgcgctaactgtctc
gaagcgacatggaacgacagggtatcatctctgtcctgtcctcagtgtcgaatggtgttc
accagtaaacctgaattaaagaagaacaccgtcctcagcgcagtgctcgacgcctataga
ataaaagcaggcgtctctgaaccagtcaaggaacattttgaggtgaaaatgaaagatcca
gatgtaatcaaatgtgataactgcatggaagctaaagccgtcaaaacttgtctgacatgt
atggcgtcttattgtgaggagcatgtaaggccccacagggagaatgccattttccgggcg
catcaactgtctgatccgttgccagatctgatggagcgtctctgttcagatcatggcaaa
ctgatggagttctactgcaatcaacaccagaactctatgtgcagtacctgtctgcaggaa
atgcataaaggctgtgagtttatcacggcagatgagcgacgcttcaaacaaaagactgac
ctgactgacaagctcaacatccttgatgtcaaaatggacaagaatcagcaggttattaca
caaatgaaggagcaacaagtcaaattaaaggacctagctacaacccgcaaacgttttctt
gagacagaatacaggcagattagagaaatgattgaccgagatgagaaagaagccatgctt
actatcgataaggaacaggaaaaaggtcagagcaaactggtcaccatgataaagaaattt
aatgagaacatcgagaagatgagtaggaccaaatctgagatcaacattctgctggaccag
tcgcagtcactagcattcataaaggcctctgtggatttgccctctgtggtaaattttgag
ccccataaccctcgtgtgaatgtggaaagtaaagaggtgatagcttatcattcctctgca
gttgcactgaaggagtggatcaccagattaatggagcagccattagaaaacagaatctct
ttacttaaaccagagtttgagaaatctgttcttggcgcagttaaagaaagtcccattccg
agtgtaccacacattaaggacccgatcagacagaatgctttttttccagtgagaggaaac
caattccctggaatcccaagtgagattcctcccctcttgccaaatccaagagacttgtgg
atgcaaaaggcaccagttgcgtggtttgacccttcagcacttttgatatctcccagtcca
acctgtggtcccaaagccaaggctccaggaactaaacagaaaaatttcagcaagcctgct
aaagatcagaaggatcgcaaagaccagaagccaaacagatctaggaatccttctaaagga
gcaaatcctgttttctccaaaagcatggaaaacttgcttgacatcacagttaaaactgta
gacatacctgacataaatccacctgctgtttcaccagatgtgctaaactctgttaaacga
agtgaccttcttaaatatggcactatcctcaattttgacgtcagaacagctcacaagcga
atcttgctgactgaaaacaacaccaaagccacagtctcggatgacccagctcattatcca
gatattccccttcgcttttctgtctgttcccaggtgctctgcacaaagggtttctctcag
ggccgtcattattgggagatcaaaatgagcagtaacaacttctgcggactgggacttgca
tatggaagaattgaccgtaagggtccgtctagccgtctggggcgtaatgcagactcctgg
tgtgtggagtggtttaacgtgaagctttctgcatggcacaacagcatcgagacggtgctg
cagaatcccaacccgagccgcgtgggcgtcttgttggactgtgatcagggaagtgcaaca
ttctataatgtacaggacagggcctaccctttccacacatttgtctttccttttattgag
gctgtatatcctgctttctggatcttctcaaatacctcttctgtcactttgtgcaagctc
aacaattga
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