Carassius auratus (goldfish): 113098631
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Entry
113098631 CDS
T07313
Name
(RefSeq) collagen alpha-1(XXV) chain-like isoform X1
KO
K24356
collagen type XXV alpha
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113098631
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113098631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113098631
NCBI-ProteinID:
XP_026119450
UniProt:
A0A6P6PG72
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MRDLGANKDSRNAAKMENETDHGKRRHCLRATVDVMLFVFSLVSFAFCFLLSVQTSGMRD
RIVDLEIRSGAGVLNPFHGISVDQFNSMIQERVDELLSQRSYEHLVRIRTARQVSSTECN
CPPGPPGKRGRRGPNGDSGPPVQEDANVLKESSVQCYCPRDSNSLVRTEQSVVHLAQKGD
QGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPPGPRGPPGDTGK
DGPRGVPGLPGDPGMPGDIGQRGPEGPPGHKGSTGQPGIPGIDGMKGDRGERGEKGDMGE
EGPKGDTGEKLCSNPGEGSYNADNGDAGSSAAGIKGEPGEPGHGGQKGEPGLPGLPGLPG
IKGEPGFFGPQGEPGLPGLPGTKGERGEQGPPGKGERGETGPAGHKVR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagggatttaggagcaaataaggattcccgaaacgcggcgaaaatggagaacgaaacc
gatcatggcaagcgacgccactgtcttcgagctacagtagatgtgatgctttttgtgttt
tctcttgtgtccttcgcgttttgctttttactgagtgttcagaccagtggtatgcgggac
agaatcgtggatctggagattagaagtggcgcgggggtcttaaacccgttccatgggatc
tctgtggatcaatttaattcaatgatccaggagcgagtggacgagctgctgtcacagcgt
tcttatgaacacttggttagaataaggactgcccgtcaagtctcatcaaccgaatgcaac
tgcccaccaggtccacctggcaaaagaggaagaagaggacccaatggagactctggacct
cctgtgcaggaggacgcaaacgtcctgaaggagagctcggttcagtgttactgtccgcga
gacagtaactctctcgtgcgcaccgaacagagcgtggtccacctggcccaaaagggggat
caaggagaccagggaccaaggatggtcttccctaagataaatcatggctttctttctgct
gatcagcaactcattaaacgtcgactcattaagggtgaccagggtcaagcagggccccca
gggcctcctggacctccaggccccccaggccccaggggaccaccaggggacacaggaaaa
gacggtcctcggggagtcccagggctccctggagaccctggaatgcctggagatattggt
caaaggggacctgagggccctccaggacataagggttccactgggcaacctggtattcca
ggtatcgatggaatgaagggtgacagaggtgaacggggtgaaaagggagacatgggagag
gaggggccaaaaggtgacactggagagaagctttgctccaatccaggagagggatcatat
aacgcagataatggtgatgctgggtcatctgctgctggaatcaagggtgagcctggcgag
ccagggcacggaggacaaaagggtgagccaggacttccagggctgcctggactccccggg
attaagggtgaacctggattctttgggcctcaaggtgagcctgggcttccaggcctgcca
ggaaccaagggagagagaggagaacaaggaccgcctggcaagggtgaacgtggtgagaca
ggtccagcaggacacaaggtaagatga
DBGET
integrated database retrieval system
