Carassius auratus (goldfish): 113100202
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Entry
113100202 CDS
T07313
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04136
Autophagy - other
caua04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113100202 (atg4c)
04136 Autophagy - other
113100202 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caua01002
]
113100202 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113100202 (atg4c)
03029 Mitochondrial biogenesis [BR:
caua03029
]
113100202 (atg4c)
Peptidases and inhibitors [BR:
caua01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
113100202 (atg4c)
Membrane trafficking [BR:
caua04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
113100202 (atg4c)
Mitochondrial biogenesis [BR:
caua03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113100202 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
YIEGIA_cap
Motif
Other DBs
NCBI-GeneID:
113100202
NCBI-ProteinID:
XP_026120790
Ensembl:
ENSCARG00000003780
UniProt:
A0A6P6PKA7
LinkDB
All DBs
Position
6:complement(20111863..20125574)
Genome browser
AA seq
506 aa
AA seq
DB search
MTASSKCKQKLVDAQRVTYNKTCEQKLHRMCCDGFCSVADKMETKGTDEVEKLKSKFMSA
WHNVKYSWALKSKTAFSRNSPVFLLGKCYHFKAVDDESPTGSCTAEALDDDIVTGNVDGF
RKDFTSRIWLSYREEFPALPGSTITSDCGWGCTLRAGQMILAQGLLLHNLGRDWIWSDAL
TLEPLDTETWTSSAARRLVSTLEASIQGERLQVTQPICAAAQGGAEEADSYLHEAYHRTI
VSWFGDEPAAQLGIHRLVQLGMRSGKRAGDWYGPAVVAHILRKAVDEAVDERLKGISVYV
AQDCTVYSADVIDSHSGQTGSHSDPQGLGSGAAPDSRAVVILIPVRLGGEKINPEYLSFV
KSILSLEYCIGIIGGKPKQAYYFVGFQDDSLIYMDPHYCQSFVDVSTSDFPLQSFHCPSP
KKMPFSKMDPSCTIGFYSKNVEHYERISNELSKILQPSSKEKYPAFTFMKGHGKDYELSL
AVEKREWPFIRDTRKAGTTSGDFVLL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttcctcaaaatgtaaacagaagttagtagatgcacagcgagttacgtataac
aagacatgtgagcagaaactccatcgtatgtgttgtgatgggttctgctccgtggctgat
aaaatggagactaaagggaccgacgaggtggagaaactgaagtccaagtttatgtcagca
tggcacaatgtgaaatacagttgggctctcaagtcaaaaactgccttcagccgtaattct
cctgttttcttgttggggaaatgctaccacttcaaggctgtggatgatgaaagccctact
gggagttgtactgccgaggcattagatgacgatattgtaaccggtaatgttgatggattt
cgcaaggacttcacctcacgaatttggctgagctatcgagaagagtttcctgctcttcct
ggctccaccatcacttcagactgtgggtggggttgtacactccgggcagggcagatgatc
ttggctcagggtctcttgcttcacaacttgggaagagactggatctggtcagatgcactg
accttggagcccctggatacagagacatggaccagcagtgcagcacgaagactggtgtcc
acattagaggcctccattcagggagaacgattgcaggtcacccagcctatctgtgctgct
gctcaaggaggggctgaggaggctgattcatacctgcatgaggcatatcaccgcaccatt
gtgtcctggtttggggacgaacccgcagcccagctgggcatccacagactagtgcagcta
ggaatgagatctggaaaacgagcaggagattggtatggcccagcagtggtggcacacata
ctccgaaaagctgttgatgaagcagtagatgagaggctgaaagggataagcgtttatgta
gcacaggactgcacagtgtacagtgctgatgttatcgatagccattcagggcagacgggc
agccacagtgatcctcagggactcggttctggagctgcccctgatagtagagctgtcgtt
atcctcatccctgtgagactcggtggagagaaaatcaacccagaatacttgagctttgtc
aagagcatattaagcttggagtactgtatcggcatcattggtggaaagcctaaacaggcc
tactattttgttggatttcaagatgacagcttgatttacatggatcctcattactgtcag
tcttttgtggatgtcagcacaagcgatttccctctgcagtcttttcattgcccatcacca
aagaaaatgcctttcagtaaaatggacccaagctgtacgattggattctactcaaaaaat
gtcgaacactatgaaaggattagcaacgagctgtcaaagatattgcagccttcatcgaaa
gagaagtaccctgcattcacctttatgaagggacacggaaaggattatgaactttcgctt
gctgttgaaaagcgagaatggcctttcatcagggacacaaggaaagcagggacgacttcg
ggagacttcgtgctgctctga
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