Carassius auratus (goldfish): 113101279
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Entry
113101279 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113101279
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113101279
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Pre-60S particles
Helicases
113101279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
TFIIF_alpha
YbjM
Motif
Other DBs
NCBI-GeneID:
113101279
NCBI-ProteinID:
XP_026121402
Ensembl:
ENSCARG00000025756
UniProt:
A0A6P6PKS9
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MENFSDGKWESLPVKLHDSILQTLKELKFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPALEILLKREEKLKKMQVGALIITPTRELALQISEVMGRFLQGFPQFRQILLIGG
SNPIEDVEKFKTQGANILIATPGRLEDMFRRKADGLDLATAVKALDVLVLDEADRLLDMG
FEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSVQKTPA
RLSNYYTVCRAEEKFNALVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLIKNVSIHCIH
GKMKHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTA
RIGNQGNALVFLLPMEESYVNFLSINQKCPLQAYPPVKDVVDVLPKLKAMALGDRAMFEK
GMKAFVSCVQAYAKHECSLIFRIKDLDFAALARGFALLRLPKMPELRGKTFPDFKPEAIN
TDTIRFKDKNREKHRQKRLAELKEKEMPMKKNFIKNKAWSKQKNKKEKKKKKASKRKLDE
ESDVDDEDFNELLNDTRLLKKLKKGKISEEDFDKHLSSAGSSRPKRAEVDGSDGDGE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggagaactttagcgatggaaaatgggagagtttgccagttaaattacatgacagcata
ttacagactcttaaagagctgaaatttacatacatgactcctgttcagtctgcctgcatc
cctctttttatgagtaataaagatgtggctgctgaagccgtgactggcagtgggaaaacc
ctagcatttgtgattcctgcattagaaatcctcttaaaacgagaagagaagttaaaaaag
atgcaggtcggtgcattgatcataacacccacccgtgaacttgctctgcagatcagcgag
gtgatgggacgatttctgcagggatttcctcagtttaggcagattcttttaattggtgga
agcaaccctatcgaggacgtagagaagtttaagactcagggagctaatatcctaattgcg
acccctgggcgattggaggacatgttcaggaggaaggctgatgggctcgatttggccacc
gctgtgaaggcgttggacgttcttgtcctggatgaagcagaccgattgctggacatgggc
tttgaagccagtttaaacactattctggggtatttacccaagcagcggcgcacagggctt
ttctcggccacacagacgcaagagctggagaagctggtgagggccggtctgcgtaaccct
gtgagaatcacagtgaaggagaaaggtgtggcggcctccagcgtgcagaaaacaccagcc
agactcagcaattattacaccgtctgtcgtgctgaggagaagttcaacgctttggtggcg
tttctcaggcagcacaaacatgagaagcagctcgtgttcttcagcacctgtgcctgtgtg
gagtacttcggtaaagctctggaagtcttgatcaagaacgtcagcatccactgcatccac
gggaagatgaagcataaacgaaacaagatctttgcagacttccgggcactgaagagtggg
attctggtgtgcaccgacgtcatggccagaggcatcgacataccagaagtgaactgggtg
cttcagtacgacccaccgagcagtgcaagttcctttgtgcatcggtgtggaagaaccgca
cgcatcggaaaccaaggcaatgctctcgtctttcttctgcccatggaagagtcgtatgtt
aatttcttgtccattaatcaaaagtgtccgcttcaggcatatcctccagtgaaagatgtg
gttgatgttctgcctaaactgaaggcgatggctttaggcgaccgagcgatgtttgagaag
ggcatgaaagccttcgtgtcgtgtgtgcaggcgtacgccaaacatgagtgtagtctgata
ttccgcattaaagacctggattttgctgctctggcccgtggctttgctctcctccgtttg
cccaaaatgcctgaactgagaggaaagaccttcccagactttaaaccggaggccatcaac
accgacaccatccggttcaaagataaaaacagggagaaacacagacaaaaaagactggcg
gagctgaaagaaaaagagatgccgatgaagaagaacttcattaagaacaaagcctggtca
aagcagaagaacaagaaggagaaaaagaaaaagaaagcttccaaaagaaaactggatgaa
gaatcagatgttgatgatgaagacttcaatgagcttttaaatgacacgcgtctgctgaag
aaactcaagaaggggaagatcagtgaagaggactttgacaagcacttgagttcagcgggc
agctctcgtcccaaacgagcagaagtggacggttctgatggagacggagagtga
DBGET
integrated database retrieval system
