Carassius auratus (goldfish): 113101337
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Entry
113101337 CDS
T07313
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113101337 (chd1l)
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113101337 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_22
Selenoprotein_S
SLFN-g3_helicase
PAP1
Motif
Other DBs
NCBI-GeneID:
113101337
NCBI-ProteinID:
XP_026121422
Ensembl:
ENSCARG00000040322
UniProt:
A0A6P6PKV0
LinkDB
All DBs
Position
6:22208635..22224300
Genome browser
AA seq
1037 aa
AA seq
DB search
MSTFLRAVKNNIPEKEKSELSESDLKKWGLEAIHLRFYQVDGVRWLSQCMKNQQGCILGD
EMGLGKTCQTISLLVYARGCLKMNGPFLVLCPLSVLENWRQELERFCPSLSVICYTGDKE
RRAELQKELRNDQRFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLK
EFTVGFRVLLTGTPIQNNLQEVYSLLAFIQPSLFLPEAAEDFVSAYADVQTEPALADELH
RVLQPFLLRRVKAEVAAELPKKTDLLVFHGLSALQKRYYKAILMRDLDAFRTDQNTRTRL
LNILMQLRKCVDHPYLFDGVEPEPFEMGEHLVKASGKLSLLDTMLSYLQEGGHRVLLFSQ
MTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSSKDVFIFLLSTKAGGVGMNLT
AADTVIFVDSDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTVEEIIYSRAVSKLRLTD
TVIEEGRFSLLDQAQSAASGLQLSEILKFGVDKLLSSEESSIQDVDLRLILGQSRDGRWL
TDEEHAKLDEEHAKLNESDEEEDEDLEGQHHMYYFEGKDYSKDPSADDEKTFELLLEKQF
ADLEDAGKEGRALRNKAGVSLSGPLIDPERKKRPLTESELEQRRQKRQEAAAKRAKLHEE
RKKQQEELNYKKKMAWWESCGYKSLCLPQVDSEGEDIESDEDEDDVVSCSSTDSDHTAIR
YMLGDVTHPQADQEDAIIVHCVDDSGHWGRGGLFTALERRSDEPKKQYELAGNMEDLELG
NVLLFPIDDKQSRLSGRDYLALIVAQQRDKANNLSGIRLTALDEGLKKIYRDAKQKNASV
HLPRIGHSTKGFNWYGTERLIRKHLATKGISTFIYYYKRAPSSSSTVSSTTCTSTPSTSH
SASDPAASSPSGSSSTIGNSEDLTKTPEPSTMSHECQGSPGLADFMRGVHVYFYNMAATE
KKKLARYLITYDGDEEDLMSSHVTHIVGEVENPVHAQELRDLLHQYPQTLLVKKKWLESC
FANQRKVSVSKYVIRLT
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatttcttcgagcagtcaaaaacaacataccagaaaaggaaaaatcggaacta
tcagagagcgatctgaaaaaatggggattagaagcgatacatctgaggttttatcaggtg
gatggagtgaggtggctgtcacagtgtatgaagaaccagcagggctgcatcctcggtgat
gagatgggtctgggcaagacctgtcagaccatttctctgctggtatatgctcggggatgc
cttaagatgaacggaccgttccttgtgctttgtcccttatctgttttggagaactggaga
caggagttagagcgcttctgtcccagtttgtctgtgatctgttacactggggataaagaa
agacgagcagagctccagaaagagctcaggaatgaccaacgtttccatgtacttctcacc
acctatgagatgtgcctcaaggatgccagatacctgaaaagttggaaatggaagatttta
gttgtcgatgaggctcaccggctgaagaaccaggaatcgttgctgcaccaaaccctcaaa
gagtttacagtaggtttccgagtgctgttgacaggcacccccattcagaataacttgcaa
gaagtctattccctcctcgccttcatccaacccagtctgtttctgcctgaagccgctgag
gactttgttagtgcctacgcagatgtacagactgaacctgctcttgccgatgagcttcat
cgagtgctccagccctttttgttgcgcagggttaaagcagaggtggcggccgaactaccc
aagaagaccgatcttttggtttttcatgggctgtctgcccttcagaagagatactataaa
gccattctgatgagagaccttgatgcctttaggactgatcaaaacactaggacccgactt
ctgaacattttaatgcagctcaggaaatgtgtggaccatccgtatttgtttgatggtgtg
gaaccagaaccatttgagatgggggagcatttagtgaaggccagtggaaagctctctctt
ttggacaccatgctgtcttatctccaggaggggggccatcgtgttcttctgttttctcaa
atgactagaatgctggatattctgcaagattacttggagtacagaggttacagttatgag
cgcctggatggttcagtccggggagaggaacgcaacctagctattaaaaacttcagctcc
aaagatgtttttatattcctcctcagcaccaaagctggaggggttggcatgaacctaact
gcagcagatacggtgatatttgtggacagtgatttcaacccacagaatgacctgcaagca
gcagccagagcccacaggattggccaaacaaggcctgttaaagtgatccggcttctcggt
agagatactgtagaagagatcatctattcccgtgctgtgtctaaactacgtctcacagac
accgtgattgaggagggacgtttctctctgctggaccaggctcaatctgcagcttctggc
cttcagttgagtgagatcctgaagtttggtgtggataagctgctgtcgtcagaggagagc
tccattcaagacgtagacctcaggctgatcctggggcagtctcgagacggccgatggcta
acagatgaagagcatgccaagcttgatgaagagcatgccaagcttaatgagagcgatgaa
gaggaagatgaggacctggagggtcaacaccacatgtactacttcgagggcaaggactac
tctaaagaccccagtgccgatgatgagaagacctttgaactgttacttgagaagcagttc
gctgatctagaggatgctgggaaggaaggccgtgcacttcgtaataaagctggggtgtcc
ctgtctgggcccttgatcgacccagagagaaagaaaagacctcttacagaatccgagtta
gaacagagacgtcagaagagacaagaagctgctgcaaagagggcgaagctgcacgaggaa
aggaaaaagcaacaagaagaactaaattacaagaagaagatggcgtggtgggaatcatgt
ggctacaaatcgctgtgtttgccgcaagtcgacagtgagggtgaggatattgagtctgat
gaagatgaggatgatgttgtcagctgtagctccactgattcggatcacacagccattcgc
tatatgctgggtgatgtaactcaccctcaggctgaccaagaggatgccattattgtgcac
tgtgttgatgactctggacactggggccgaggaggattgtttaccgcactggagcgcaga
tcagatgagccgaagaagcagtatgagttggccgggaacatggaagacttagaactgggg
aatgttctgctttttcctattgatgacaaacagtcgaggctcagtggaagagactatctg
gcacttatagttgctcagcagagggataaagccaacaatttgtcaggcattcggctgact
gccttggatgagggcctcaagaagatctacagggatgccaaacaaaagaacgcaagtgtc
catctgcctcggattggtcactccaccaaaggcttcaactggtatggaacagagagactc
attcgcaagcacctggccaccaaaggcatctctacatttatctactattacaaacgtgct
ccttcaagctcatctacagtttcttctaccacatgcacatctactccatcaacctcgcat
tcggcctcagacccagcagcatcatcaccatctggttcctccagcaccattggtaacagt
gaagaccttacaaagacaccagaaccctccactatgtcacatgaatgtcaggggtcacca
gggttggctgactttatgagaggtgttcatgtctacttctacaacatggctgctacagag
aagaagaagctcgcccgatatctcataacatatgacggcgatgaagaggatctcatgagc
tcacacgtcactcatattgtaggagaggtggaaaatcctgtccatgcacaggaactaaga
gatctattgcatcagtaccctcagactctgcttgtaaagaaaaagtggttggagtcttgc
tttgctaaccaaaggaaagtcagtgtgtctaaatatgtaattaggttaacttga
DBGET
integrated database retrieval system
