Carassius auratus (goldfish): 113101627
Help
Entry
113101627 CDS
T07313
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04810
Regulation of actin cytoskeleton
caua05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113101627
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113101627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113101627
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113101627
Factors involved in mRNA localization
Other mRNA localization factors
113101627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
113101627
NCBI-ProteinID:
XP_026121450
Ensembl:
ENSCARG00000001456
UniProt:
A0A6P6PM83
LinkDB
All DBs
Position
6:22576643..22614381
Genome browser
AA seq
1281 aa
AA seq
DB search
MNFSLFDSCAISRDAATDHCSEMHRLRVMASAVTLEDALSNVDLLEELPLPDQQPCIEPL
PSSLIYQPNFNTNFEDRNAFVTGIARYIEQATVHSNMNEMLEEGQEYAVMLYTWRSCSRA
IPQVKCNEQPNRVEIYEKTVEVLEPEVTKLMNFMYFQRTAIDRFCGEVRRLCHAERRKDF
VSEAYLLTLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQFLRKMSEPSSIQESQNLSM
FLANHNKITQSLQQQLEVIHGFDELLADIVNLCVDYYENKMYLTPSEKHMLLKVMGFGLY
LMDGTNSSIYKLDAKKRINLTKIDKFFKQLQVVPLFGDMQIELARYIKTSAHYEENKSRW
SCTSAGSSPQYNICEQMIQIREDHMRFISELARYSNNEVVTGSGRQEAQKTDSEYRKLFD
LALQGLQLLSHWSAQVMEVYSWKLVHPTDKYSNKECPDNAEEYERATRYNYTCEEKFALV
EVIAMIKGLQVLMGRMESVFNHAIRHTIYAALQDFAQVTLREPLRQAIKKKKNVIQSILQ
AIRKTICDWETGREPHNDPALRGEKDPKGGFDIKVPRRAVGPSSTQLYMVRTMLESLVAD
KSGSKKTLRSSLEGPTILDIEKFHRESFFFTHLLNFSETLQQCCDLSQLWFREFFLELTM
GRRIQFPIEMSMPWILTDHILETKEASMMEYVLYSLDLYNDSAHYALTKFKKQFLYDEIE
AEVNLCFDQFVYKLADQIFAYYKILAGSLLLDKRLRAECKNQGANIPWPSSNRYETLLKQ
RHVQLLGRSIDLNRLITQRVSSALYKSLELAINRFESEDLTSIMELEGLLDINRMTHKLL
SKFLTLDSIDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTNRFVRTVLPFS
QEFQRDKPPNAQPQYLYGSKALNLAYSSIYSLYRNFLGPPHIKAICRLLGYQGIAVVMEE
LLKVVKSLLQGTILQYVKTLMEVMPKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTV
CFQNLREVGNALLFCLLSEQSLSQEEVCDLLHAAPFQNILPRVHVKEGERLDAKMKRLEA
KYTALHMVPLIERLGTPQQIAIAREGDLLTKERLCCGLSIFEVILTRVRGYLDDPIWRGP
LPSNGVMHVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCFGDGLNWAGCMIITLLGQHR
RFDILDFSYHLLKVQKHDGKDEVIKSVPLKKMVDRIRKFQILNDEIFAILNKYLKSGDGE
NMPVEHVRCFQPPIHQSLASN
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcactatttgacagttgcgctattagtagagatgctgctactgatcactgc
tcagagatgcacagactcagagtgatggcgtccgcggtgactctggaagatgctctgtct
aatgtggacctgctggaggagctgccacttccagatcagcagccctgcatcgagcccctg
ccctcctcgctcatttaccagcccaacttcaacaccaactttgaggaccgcaatgctttt
gtgacaggcattgcacgttacatcgagcaggccaccgtccactccaacatgaatgagatg
ttggaggaaggacaggagtatgccgtgatgctgtatacctggaggagctgttcaagagct
attcctcaggtgaagtgtaatgaacagcctaacagagtggagatctatgagaagacagtg
gaggtgctcgagcctgaagtcactaaactgatgaacttcatgtactttcagaggacagca
atagatcgcttctgtggggaagtgcgtcgactatgtcacgccgagaggaggaaggacttt
gtgtctgaggcctatttgctcacgctggggaagttcatcaacatgtttgcagtactggac
gaacttaagaacatgaagtgcagcgtcaaaaatgatcactccgcctacaagagagccgcc
cagttcctgaggaaaatgtctgagccatcctccattcaggaatctcagaacttgtccatg
ttcctggccaaccataacaagatcactcagtccctacagcagcagcttgaagtgattcat
ggatttgatgagctgttggcagacatcgttaacctgtgcgtggactactacgaaaacaag
atgtacctcacccccagtgagaagcacatgctactcaaagtgatgggctttggtctctat
ctcatggatggaaccaacagcagcatctacaaactggatgccaagaagagaatcaacctc
acaaaaattgacaaatttttcaagcaattgcaggtagtacctctgtttggggacatgcag
attgagctggcccgctatatcaaaaccagcgctcactacgaggaaaacaaatccaggtgg
tcgtgcacatctgcaggcagtagcccgcagtataatatctgcgagcagatgattcaaatc
cgtgaagaccacatgcgcttcatttctgagctggctcgctacagcaacaatgaggtagtg
acaggctcagggcgtcaggaggcccagaagacagactctgaatacaggaagctgtttgat
ctggctctgcagggtctgcagctgctctctcattggagcgctcaggtcatggaagtgtat
tcctggaagttggtgcaccccacagataaatactccaacaaagaatgcccagacaacgct
gaggagtacgaacgcgccaccagatacaactacacctgcgaggagaaatttgctctggtg
gaggtcattgccatgataaagggcctgcaggttctgatgggtcgtatggagagtgtgttc
aaccacgcaatccgtcacaccatctatgcagctctgcaagactttgcccaggtcacgctc
cgagaaccgctgcgtcaggccatcaagaaaaagaagaatgtcatccagagcatcctccag
gccatccgtaagaccatctgtgattgggagactggcagagagccacataatgacccagcc
ttgcggggtgagaaggatcctaaagggggatttgatatcaaagttcctcgtcgtgccgta
ggaccctccagcactcagctgtatatggtcaggacgatgctggagtctctggtcgctgat
aagagcggttcaaagaagactctgcgcagtagtttggagggtccgaccatcctagacatt
gagaagttccatcgcgaatcattcttcttcactcacctgctcaacttcagtgagacgctg
cagcagtgctgtgatttgtcccagctctggttccgggagttctttttggagcttacaatg
ggtcgccgcatccagttcccaattgagatgtccatgccctggatcctcaccgaccacatc
ctggagactaaagaggcctctatgatggagtatgtgttgtattcattggatctgtacaac
gacagcgcacactatgctctcacaaagtttaaaaagcagtttctttatgatgagattgaa
gctgaggtgaacctctgctttgaccagtttgtctacaaacttgctgatcaaatttttgcc
tactacaagattcttgccggaagtctcctccttgataagagactaagagccgaatgtaag
aatcagggtgccaatatcccgtggccttcctccaatcgttacgagacgcttctcaaacag
agacatgttcagctccttggacgatcgattgatttgaaccgtctgatcacccagcgagtg
tcctcggcactgtacaaatccctagagcttgccatcaaccgctttgagagcgaggacctc
acttccatcatggagttggaggggttgttggacataaaccggatgacccataagctcctc
agtaagtttttgacactggacagtatcgacgccatgttccgtgaggcaaaccacaatgta
tctgcgccctatggcagaatcacactccatgtcttctgggaactcaactatgacttcttg
cccaactactgttacaatggctccacgaacaggtttgttcgcactgtgctgccattttca
caagagtttcagagagacaagcctcccaatgcccagccacagtacctgtatggctcaaag
gctttgaatttggcgtacagtagcatatacagcctctaccggaacttcctgggacctcca
catattaaggctatttgcagacttctaggataccagggcatcgctgtggtgatggaagag
ctgttaaaggtcgttaaaagcctgcttcagggcaccattctgcagtatgtaaagaccctg
atggaagtcatgcccaagatatgccgtctgcctcgccacgagtatggctctccaggtatt
ctggagttcttccaccaccagctgaaggacattgtggagtatgctgagctgaagactgtg
tgcttccagaacctgagggaagtcggaaacgctttgctgttctgcctgctgagtgaacag
agcttgtctcaagaggaggtgtgtgacttgttgcatgcagcacccttccagaacatcttg
ccaagagttcacgttaaagaaggtgaacgtctggatgcaaagatgaagcgtttggaggcc
aaatacacagcgctgcatatggtgcctctaattgagcgtctgggaacccctcagcaaata
gccatcgcccgtgaaggtgacctgctgactaaagagcggctgtgctgcggtctctccata
ttcgaggtcattctgactcgcgtccgcggttatctggacgacccaatctggcgcggccca
ttgcccagcaacggtgtgatgcacgtggacgagtgtgtggagttccacaggttgtggagc
gccatgcagtttgtgtactgcatcccggtgggaacgcacgagttcactgttgaacaatgt
tttggagatggtctgaactgggctggttgcatgattatcacattgcttggacagcacaga
cgctttgatatcctggacttcagctaccatctccttaaggtgcagaaacatgacggcaaa
gatgaggtcatcaagagtgtgcctctaaagaaaatggttgatcggattcgcaagttccag
attctgaacgatgaaatctttgccattttgaacaagtacctgaagtctggggatggagag
aacatgccagtcgaacacgtccgttgctttcagcctccaatccatcagtcattggccagt
aactga
DBGET
integrated database retrieval system
