Carassius auratus (goldfish): 113101952
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Entry
113101952 CDS
T07313
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
caua04054
]
113101952
Pattern recognition receptors [BR:
caua04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
113101952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_1
LRR_9
LRR_LRWD1
ThsB_TIR
LRR_6
Motif
Other DBs
NCBI-GeneID:
113101952
NCBI-ProteinID:
XP_026121495
Ensembl:
ENSCARG00000003132
UniProt:
A0A6P6PMD4
LinkDB
All DBs
Position
6:complement(23463692..23468414)
Genome browser
AA seq
953 aa
AA seq
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MSSAFFFVLNCCVLTTLTDGFSLSNCTIYFPFEYSGHLKVLCNRMGYWKTPSPLPHNTVN
LDISYNAIQRIAEWDFIRLSNLIILNISHNRIHEIHANALSDLTNLEELNLSNNKITKVT
SNLLNGLANLTHLRLDSNYIETIENQSLATLSNLRLVNFTDNKLMHISELHPLLRVPHLE
ELYLGENGFLVFNSSDIPSAFFGLKKLDLSRNPLTVFKMTENIFPDLEELDLSSCFQTNT
SNWFILDKAFLNTVKTLNLSMNHFEENQLGYIMQSFASVNWMALDNLKGFKVETVLEKAC
SPSLRGLHLEGNQLSVLNDCMFRPCALLNALHLRNNGVSRMYKSSFDHLVNLTELRIQKN
NLMQLNDTLQVLPNLRVLDLHLNSIQNLDCSDFANLTQLRQLYLHKNQIVTIKACVFKDL
GNLEELILSSNRMLTVSGTFKHGPLNLQYLDLNNNKLSAIRRNSFKALDSLRTLHLSDSQ
ILNIYPYAFAGLINLTDLHLASNKITERTLEKHYVFAGMPNLQSVDLGCNYISYNTQEEL
QIPPFMHLSELRVLKINSQRRGLNYIPSNFLKGLKNLQVFYAGNLNVKNLHVDTFSCTPK
LALLDLTSNNLANRNALPSRLFQPISGLNKITLGRTHLKSLDFLVGANLSNLTILRASTN
DLEFINQTIIQSLPQLKVLDLQNNSFTCDCSNAWFIDWAVKNNKTQVLYLNRYECRYPLS
LSGKSLAAFNTESCNVNYDFICFIYSSSIVILTLVISFIYHFLKWQLVYAYYLFLAFIND
KKRKQTLNQLDFQYDAFISYNAQEEPWVLEELVPKLEGQHGLRLCLHHRDFQPGKAIIDN
IVDAIYNSRKTVCLITHNYLKSVWCSHEIQVASFRLFDEQKDVLVLVFLEDIPMHQLSPY
YRMRKLVKKQTFLRRPKPGEDTRAFWQKLKMAIESKEDMKDRQILSGKDEDDI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgcgtttttcttcgttttgaactgttgcgttctcacaaccctgaccgatggc
ttttctttaagtaactgcaccatttatttcccctttgaatactctggccatctgaaggtg
ctgtgcaacagaatgggttactggaaaacaccttcaccgttaccccacaacactgtcaat
ctggatatttcctacaatgccatccaacggatcgctgaatgggatttcatcagactttca
aatctgattattttaaacatatctcacaacaggatacatgaaatacacgccaatgcattg
agtgacctaacaaacctggaggagctcaacctgtccaacaacaaaatcacaaaggtgaca
tcaaacctgctcaacggtctcgcaaatctgactcatttaagactcgactcgaattacata
gagacgattgaaaaccagtcacttgcgacactttcgaatttgaggctcgtaaactttacc
gataacaagttaatgcacatttccgaactccatcctcttcttcgagtaccacatctggag
gaactttacttgggagagaacggcttcctagtttttaactccagcgacatcccgtcagca
ttctttggtttgaaaaagttggatctgtcgaggaatcccttgacagtgttcaagatgacg
gaaaacatctttcctgatcttgaggaattggatttgtcaagctgtttccagaccaatact
tccaattggtttattctagacaaggcattcctgaacacagttaagactctcaacctcagt
atgaaccactttgaagaaaaccagcttggttatataatgcagagtttcgcttctgtgaac
tggatggcactggataatctgaaggggttcaaggtagagacggttttagagaaagcatgt
tctcccagtctgaggggtctccacttggagggcaaccaactttctgtacttaacgattgc
atgtttagaccgtgtgcacttttgaatgcactgcacctaagaaacaacggagtatcgaga
atgtataagtcgtcattcgatcatcttgtcaacttgacagagttacgaatacaaaagaac
aatctgatgcaactgaacgacactcttcaggttctccccaacttacgagtcctcgatctt
catctcaacagcattcaaaatcttgactgctctgattttgccaatctgacgcagttaagg
caactctatttgcacaagaaccaaattgtgacaatcaaagcatgcgtatttaaggattta
ggaaatctcgaagagctcattttgagcagcaatcgtatgctaacggtcagtggtaccttt
aaacatggccccctaaacttacaatacctggacttgaataacaataagttgagtgccatc
cgaagaaactcttttaaagctttggattcccttcgcaccttgcatctctcagatagccaa
atattaaatatctatccatatgcttttgcaggactgataaatttaacagacttgcatctt
gcatctaacaaaatcacagaaagaactctagaaaaacattatgtgttcgccggtatgcct
aacttgcagagtgtagatctgggttgcaattacatctcatataatactcaagaggagcta
caaattccaccgttcatgcatttaagtgaactgagagttttgaagattaacagtcaacgt
cgaggcttaaactacatcccttcgaacttcctgaaaggtctcaaaaacttgcaagtcttt
tatgctgggaaccttaatgtcaaaaatttacatgtggacacatttagttgcactcccaaa
cttgcgctcttggatttgacaagtaataatcttgcgaacaggaatgccttgccatccagg
cttttccagccaatatccggcctgaataagattacattgggtcggactcacctcaagtcc
ttggacttcttagtcggcgcaaatctctccaatctgacgatcctgcgagccagtacgaat
gaccttgaatttataaaccaaaccatcatccaatcgcttcctcaactcaaagtgctcgac
ttgcaaaacaacagcttcacgtgcgactgtagtaatgcttggttcatcgactgggccgtc
aagaacaataaaacacaagtcctctacctgaacaggtacgaatgtcgctatcccctttct
ttaagtggaaagagtctagcggccttcaacactgaatcctgcaatgtgaattacgacttc
atctgctttatctacagctcttccattgtcattctcactctagtcatttcatttatctac
cactttctaaagtggcaactggtctatgcatactacctctttttagccttcatcaatgac
aaaaagaggaagcaaaccttaaatcaactggatttccaatatgacgccttcatttcgtac
aatgctcaagaagagccatgggttctggaagaacttgtgcccaaacttgagggtcaacac
ggattgagattgtgccttcatcaccgagacttccagccaggaaaggccattatcgacaac
atcgtggacgcaatatacaacagccgcaaaaccgtctgcctgatcacgcacaactaccta
aagagcgtttggtgttcgcatgagatccaggtggccagcttcagactttttgatgaacag
aaagatgttttggttctagtttttctcgaggatattccaatgcaccagctttcgccgtat
taccgaatgcgcaagctggtgaagaagcagacatttctacgacgtcccaaacctggagaa
gacactcgagcgttctggcagaaactcaaaatggccattgagtctaaagaggacatgaag
gacagacagatcctttctggaaaagatgaagatgatatttaa
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