Carassius auratus (goldfish): 113102526
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Entry
113102526 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113102526
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113102526
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Pre-60S particles
Helicases
113102526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-GeneID:
113102526
NCBI-ProteinID:
XP_026121606
Ensembl:
ENSCARG00000051453
UniProt:
A0A6P6PJ34
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MEEGSVHFHEMGLDDRVLKALADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AIPLIQRILTSKQTVREQAVRALVLVPTKELGQQVQSMIRQLTAFCSRDVRVADISGKAD
ISAQKPILMEKPDIVVGTPSRVQAHINAQNLQLQTSLEMLVIDEADLLFSFGFEADLKSL
LCHLPKIYQAFLMSATLNDDVQALKELVLHNPVMLKLQGSQLPDSSQLQQYSVRCEEEDK
FLLIYTLLKLGLVQGKSLVFVRDVDRCYRLKLFLEQFSIPACVLNSELPIHSRCHIISQF
NQGFYNYIIATDEQGLENPARRSQKTQEKGKKKKKGKDKEYGVSRGIDFHNVSNVINFDF
PASVESYIHRVGRTARADNPGSALSFISHTELEMLAEVENALTGDVTHDSVLKPYGFRME
EIEGFRYRCRDAMRSVTKQAVKEARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDKDLH
PAVIKPHLKNVPDYLIPTALKSLVNPLKRRKXKKIKAGGVMLSSFKKNIRGKNPLKSFRY
TRKKREKKAGKS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaggcagtgtacactttcatgagatgggtttagatgatcgagtattaaaggct
ctggctgatttaggctggtctcagcccaccctcatccaggagaaagccatcccgctggcg
cttgaggggaaagatctgctggcccgagctcgaaccggatcagggaaaaccgcagcctac
gcgatccccctcatccaaagaatcctcacgtctaaacagactgtacgtgagcaggccgtc
agagctctagtcctggtcccgaccaaagaactgggtcagcaggtccagagcatgatccga
cagctcactgcgttctgcagcagagacgtgcgcgtggccgacatctccgggaaggcagat
atatcggcacagaagccgattttaatggagaagccggacattgtggtgggcacaccgtcc
cgagttcaagcccacatcaacgcccagaacctgcagcttcagacttcattagagatgctg
gtcatcgacgaggctgatctactcttctcctttgggtttgaagcagaccttaaaagcctg
ctgtgtcacttacccaagatctaccaggcgttcctcatgtctgcgacgctgaacgacgac
gtccaggccctgaaggagctggttctccacaatcccgtcatgctgaagctccagggatct
cagctgcccgacagctctcagctccagcagtacagcgtccgatgtgaggaggaggacaag
ttcctgctcatctacaccctcctgaagctcggcctggttcaagggaagtcgctggtgttc
gtcagagatgtggaccgctgttaccggctcaagctgtttttggagcagttcagcatccct
gcgtgtgtcctgaactctgagctgcccattcactccagatgtcacattatcagtcagttt
aatcaaggcttctacaattacatcatcgccaccgacgaacagggcctggagaatcccgct
cgacgttcccagaaaacccaggagaaaggaaagaagaaaaagaaaggaaaagacaaggaa
tatggcgtttccagaggaatcgacttccacaacgtgtctaatgtgatcaactttgatttc
cccgcttcagtcgagtcctacatccaccgcgtcggcagaacggctcgtgcggacaacccg
ggctctgcgctgtccttcatatcccacacagagcttgaaatgctcgccgaggtcgaaaac
gctcttactggagacgtcacacatgacagtgttttgaagccgtacgggttcagaatggag
gaaatcgagggcttcagatacagatgtcgggatgccatgcgatcggtgacgaagcaggcg
gtgaaggaggccagactgaaggagatcaaacaggagctgctcaattcagagaaactcaag
acgtacttcgaagacaatcccagagacctgcagctgctgcgacacgataaagaccttcac
cccgccgtcatcaaacctcacctgaagaacgtgccggattacctgatcccgacggcgctg
aagagtctcgtcaatcctctgaaacgacggaagnaaaagaagattaaagcaggcggcgtg
atgctgagcagctttaagaagaatatcagaggcaaaaatccactgaagagttttcgttac
acgaggaagaagcgtgaaaagaaggctggaaaatcctaa
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