Carassius auratus (goldfish): 113105521
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Entry
113105521 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113105521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113105521
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113105521
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113105521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_4
zf-rbx1
zf-RING_11
zf_RING_Vps8
PHD_NSD
zf-UDP
zf-RING_Vps41
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
113105521
NCBI-ProteinID:
XP_026122399
Ensembl:
ENSCARG00000010846
UniProt:
A0A6P6PNQ6
LinkDB
All DBs
Position
7:complement(2866716..2888276)
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AA seq
704 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVIRSDPRGAGSVVLGQVDSRLSPYIIDL
QSMHQFRQDTGTLRPVRRSFYDPRSAPGQGCVWEWENDSGSWTPYDTEVSIAIQAARDRQ
QPWLDLTPLGFCYLIDLQSMTQINGQTQRRRRIQRRSDLAYPLVSGPLPKPHPWSSAGSG
GLLGVGVSGISGGNGSAYPSGALPASAITSLGQPCSCQQCMLVLGVKTPSMAQTLGRKPL
PVPRPPSPKAPPRGHSYSLTLPHPPSLSRVLSPHRNSTSGASVGFGHSLSLLGSATAALS
ISSNRPPPPSVPPPPPPSTIPHMTSAPNPTAPTPSNTLISTVTTCAPTPSARVLGPMSMA
SAACAAPVPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGIT
GILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGRTSEEVVR
RYLQKVRNPPEEDCTICMESLCGPSGYKGPGVGGISRAESVGRLCQCGHQYHLQCLVAMY
NNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDSKTIRIIYNIPPGIQG
PEHPNPGKPFTARGFPRHCYLPDSEKGRLVLKLLLVAWDRRLIFSVGTSSTTGETDTVIW
NEVHHKTEFGSNLTGHGYPDSGHLDNVLEELRAQGITEEECLRD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgttgttagcctcggccgtggtcgtctgggaatggctgaacgagcacgggcgctggcga
ccctacagcccggcggtgtcccatcatatcgaggcggtgatccgcagcgaccctcgcggc
gccgggagcgtggtgctgggccaagtcgactcgcgtctatcgccgtacatcattgacctg
cagtctatgcaccagtttcggcaagataccggtacgttaagacccgtgcggcgaagcttc
tacgacccgcggtcggctccgggtcagggctgcgtgtgggaatgggagaacgactcgggc
tcatggacgccgtacgacaccgaggtcagcatcgccatccaggcggctcgggaccggcag
cagccctggctggatttaacgccgttgggcttctgctaccttatagacctgcagagtatg
acgcagatcaacggacagacgcagcggcgccggcgcatccagaggcgctcagacctggcc
tacccgctcgtttccggcccactgcctaaaccgcatccgtggtcatccgctggaagcggt
ggactcctgggggtgggcgtatcggggatcagcggagggaatggcagtgcctatcccagt
ggagctctcccagcttctgctattacttcactgggtcaaccatgttcctgccagcagtgt
atgctagtcttaggtgtcaagacacctagcatggcacaaactctcgggcggaagcctcta
cccgtacccaggccgccgagcccaaaagcaccaccaagaggacactcgtactcgcttacc
ctgcctcaccctccatccctgtcccgagtcctctcgccacataggaactccacctcaggt
gctagcgtaggcttcggacactccctctctctgctgggctcagccactgctgccctgtcg
atatcctccaaccgtcctcctccaccctctgtgccgccacccccgccgccttccaccata
ccccacatgacctctgcgcccaaccctactgcacctacaccctccaacacccttatatct
acagtgaccacctgcgctcccacgccctctgctcgtgttctgggtcccatgtcgatggct
tcagccgcttgtgccgccccggtgccgcctcgcagcagtctggctggccttagccgcccc
gccctgcagagaatcgccatggcacagtcacgggcactcattgcttcaggtgtccccacc
gtcccagtgaagaacttaaatggatccagccctgtccatccagctttggcaggtatcact
gggattctaatgagcgctgctggactcccggtctgcttgacccgcccacccaaacttgtg
ctccaccccccacctgtcagcaagagcgacatcaaacctgtaccaggccttggccactgc
tgccggaaaactacaaagaagcaagctcgcaaaggtagaacttcagaagaagttgttaga
agatatctccagaaagtccgcaacccacccgaggaggattgtacaatctgtatggagtct
ctctgtggcccatctggttataaaggcccaggtgtcggtggcatttctcgggcagagtca
gtgggtcgtctgtgtcagtgtgggcatcagtaccacctgcagtgcctggtggccatgtac
aacaatggcaacaaagatggcagccttcagtgtcccacctgcaagaccatctacggtgtt
aaaaccggcaaccagccaccaggaaagatggaataccacgtcattcctcactcccttcct
ggacaccctgactccaaaaccatccggattatttacaacataccccctggcattcagggt
ccagagcatcccaaccccgggaagcccttcacagcccgtggatttccaaggcactgctac
ctccctgacagtgagaaaggccgtctggtgttgaagctgttgctggttgcttgggaccgc
cggctgatcttctcagtgggcacatccagcaccacgggcgagaccgatacggtcatttgg
aatgaggtgcatcacaagaccgagtttggctccaacctgaccggacacggttacccagac
tccggtcaccttgacaatgtcttggaagagctgagggcgcaaggcatcactgaggaagag
tgtctgagggactga
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