Carassius auratus (goldfish): 113105709
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Entry
113105709 CDS
T07313
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113105709
09122 Translation
03013 Nucleocytoplasmic transport
113105709
03015 mRNA surveillance pathway
113105709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113105709
03041 Spliceosome [BR:
caua03041
]
113105709
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113105709
Spliceosome [BR:
caua03041
]
Complex C
Other components
EJC/TREX
113105709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
113105709
NCBI-ProteinID:
XP_026122738
Ensembl:
ENSCARG00000015950
UniProt:
A0A6P6PNT9
LinkDB
All DBs
Position
7:complement(7460305..7482172)
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AA seq
1254 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKTALEQRGLAKSGQKNALIKRLKGALMLENLQRSSTHQ
TGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREATEADETQSPAGPEEDEPTP
TKDSSSFLPERHHILHSHLPATQAGGGGGLPQDPGLLGSQRLDTGPVPVSQESPDTKAGR
IWHPSFPPGHEEVATPSPPRAVASLSVRVVGQPERQGLPLMLPRAQEREGTAPVEAGPAH
SVLQLSRSARAAACAEVDSDDNDEDDDDDDSDEDDEWGPTSHGKKNVRAPPVHTPPAAVP
QRSRRKLQPPQHIPPQPQPVLQPPLQLRQPTPPPSPPPELSFPLPDTPKQSPHDQDEAAG
LAEGAAPGAGMVSPPSLKRQESSSSSRSSSPEPPSTRRPGPLSLLVRKMESEGVFGGAQK
AGMEGEGGMEVEEHEDGEAEVQDSAQKLLGSEVSVSVPTAQQDTQESELKEERDEQKRSE
EKEYENVDETSAPLHLTSPTTFPTRRPHIFSEVPPPDSLTSSSKPEQVSVLTSAPKCSEV
VAMEPEASTTTPESKHEEEKEVKVLDQGPPKQSPKPAEESEKFLKSAHSTSEEGEMDTTR
DHSRREKGHKRRQSSSSDTDSESSSSHSSSSPSQDKSSPTTQKKGEEENRKDDEKKAQSS
RDVKQEALSEPAGQVAMELEGHSHSESAMQQSDHQGADSSNTRPEESSAVKSFAARKISL
SSKTEIASSEAEPVGGASRKRRWGSSTAVTAKKPSISITTESLKTLIPDIKPLQEAVVEL
HPDEGRLSGDEDSPGPREREEPEEDQGLKIRRTVTQIVPSDGHENGQKEMKEEEEDDEEE
QKWTKGETEKQKKPEKSPDVSMEIQEAESKKVTPNDSLVRRSISQQKSGVSITIDDPIRT
GRQLSPPRGKTSHIIHVCNLVRPFTLGQLKELLNRTGTLVEEGFWIDKIKSHCYVTYSTV
EEAVATREALHGVKWPTSNPKVLRVDFCEQDEVDFHKGIVSSERAVEGHDPHASGTSARP
AAHHPLPPANHEKEKERAKERDGGAAAVRDQWAERERAMERRERTRSEREWDRDKVKDFG
KDDRERTRRSRSRDRKRRERGKSKEKKTEKKDKPEEPPVKLLDDLFHKTKAAPCIYWLPL
TEEQATQRALERAERIKEREKRRKELQEEEDKKQEERRERAKGRDREGGNTGGAGVVRRS
TEGERDRGKEREKERGREAEKRRDVHRGRGSDSKTAGGSRSSQSCSISSRDRRH
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaggatgttacgttagacggcaaaccgcttcattcgcttcgtgtggcg
gatttaaaaaccgccctggagcaaagagggctcgccaaaagtggacagaaaaatgcactc
attaaacggctgaaaggggctcttatgttggagaatctccaacgatcatctacccatcaa
actggtcttcagcccaattcgcagattggagaggagatgagtcagaacagctttataaag
cagtacctggccaaacagcaggagctcctccgacagagactggagagagaagcccgggag
gccactgaggcagatgagacccagagtcctgctggtcctgaggaggatgaacccacacca
accaaagatagctcttcctttctaccagagagacatcacatcttacactctcatctgcct
gcaacccaggcaggtggaggaggagggttgccacaggacccgggtttattgggatcacaa
aggttggatacaggccctgttccagtgtctcaagagtcacccgacactaaagctgggagg
atctggcatccttctttccctccgggccatgaggaggttgcaacaccctctcctccacgt
gcagttgcctccttgtctgtgcgtgtcgttggacaacctgagcgtcaaggcttgcctctc
atgttgccccgtgcccaggaaagagagggaacggccccggtcgaagcaggtcctgctcat
tcagtgttgcagctcagccgttccgcgagggctgcagcttgtgctgaagtggatagcgat
gacaatgatgaggatgatgatgatgacgacagtgatgaagacgatgaatggggtcctacc
tcacatgggaaaaagaacgtccgggctcctcctgtacacactccaccagctgcagtcccc
caacgatcccgcagaaagcttcaaccaccgcagcacatccctccccagcctcaaccagtc
ctccagccacctctgcagctccgtcaacctactcctcccccatctccacctccagagctg
tctttcccgctacctgacactcccaaacagagcccacatgaccaagatgaggcagcaggc
ctagcagaaggtgctgctccaggggcaggcatggtctctcctccatccctcaaaagacag
gagtccagctccagttctagatccagtagcccagaacccccatccacacgcagacctggt
ccacttagcctgctggtccgcaaaatggaatcggagggcgtgtttggtggtgcacagaag
gcagggatggaaggcgaaggagggatggaagttgaagagcacgaggatggtgaagcagaa
gtgcaagactcagctcagaagcttctcgggtcagaggtgtcagtgtcagtacccactgct
caacaagatactcaagaatctgagttgaaggaggagagagatgagcaaaaaagaagtgag
gaaaaagaatatgagaacgtggatgagacttctgcaccattacatttgacatcacccacc
actttcccaactagaaggccgcacattttctcagaggtcccaccacctgattcacttaca
tcatcctctaagcctgagcaggtgtcagtgctcacatcagcgccgaagtgctctgaagtt
gttgctatggagccagaagcctctacaacaacacctgaatcaaaacacgaagaagagaaa
gaagtgaaagttttagaccaagggccaccgaagcagtcacctaaaccagcagaagagagt
gaaaagtttttaaaatctgcacactctacatctgaagaaggagaaatggatacaacaaga
gaccattcacggagagagaaaggtcataaacgacgtcagtcatcatcatctgacaccgat
tcagaatcctcatcttctcactcttcaagctctccttcacaggataaatccagcccaacc
acccaaaagaagggtgaggaagaaaacagaaaagatgatgaaaaaaaggctcaatcttca
agggatgtaaagcaggaagctctctctgagcctgcaggccaagttgccatggaactggag
ggccactctcattcagagagtgctatgcaacagtctgaccaccagggggcagattccagc
aacacccgcccagaggagagctccgctgtaaaatcgtttgctgcccgaaagatctccctg
agcagtaaaacggagattgcgtcatctgaggcagagccggtgggtggagccagcagaaaa
agaaggtggggttctagtacagcggtcactgccaagaagccgtcaatcagcatcaccact
gaatcgctgaagacattaattccagacatcaagcccctacaggaagcagtggtcgagctt
cacccagatgaggggcgtctctctggggatgaagactcacctgggcctcgtgagcgagag
gaaccggaagaggatcagggtctcaagatcagacgcacagtgacacagattgtcccatct
gatggacacgagaatgggcagaaagaaatgaaggaagaggaggaggatgatgaagaagag
cagaagtggactaaaggagagacagaaaaacaaaagaaaccggagaagtcccctgatgtt
tcaatggaaatacaggaggctgagtccaaaaaagtcactcccaatgattctttggtgcga
cgctccatcagtcagcagaaatcaggtgtgtccataactattgatgaccctataaggact
ggtcgccagctttctcctcctcgtggaaaaacctcccacatcatacacgtctgcaacctg
gtgcgacctttcaccttagggcaactgaaggagttgttaaaccggactggtacattggtg
gaggagggtttctggatcgataagatcaaatctcactgctacgtcacatactccactgta
gaagaagctgtggccactcgagaagcactgcatggtgtgaaatggcccacaagtaatccc
aaagtactacgtgtggatttttgcgagcaggatgaggtggacttccataaaggtatcgtg
tccagtgagcgtgcagttgaaggtcatgaccctcacgcctcaggaacctcagcccgccct
gctgcccatcacccactgccacctgcaaaccacgaaaaagagaaggaacgagcaaaagag
cgagatggaggagctgcagctgtgagagaccagtgggcagagagggaaagagcaatggag
aggagagagaggactcgttctgaacgggagtgggaccgggataaagtcaaggacttcggg
aaggatgaccgggaaagaacgaggaggtcacgatcacgggacagaaaacgcagagagaga
ggcaagagcaaagagaagaaaacagagaagaaagataaaccagaagagcctcctgtaaaa
cttcttgatgacctattccacaaaactaaagcagctccctgtatatactggttacctctc
acagaagaacaggcaacacaaagagctctggagcgtgcggagcgcataaaagagcgcgag
aagagaaggaaggaactccaggaggaagaggacaaaaaacaagaagaacgtagagagcgt
gcaaaaggccgtgacagagagggagggaacacaggaggagcaggtgttgtgagacgttcg
actgagggagagagagacagaggtaaggaaagagagaaagagaggggcagagaggcagaa
aagaggagagatgtccacaggggccgtggtagcgactccaaaactgcagggggcagcaga
agctcacagagctgtagcatctcctccagagacagacgacactga
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