Carassius auratus (goldfish): 113105774
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Entry
113105774 CDS
T07313
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113105774
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113105774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113105774
NCBI-ProteinID:
XP_026122839
Ensembl:
ENSCARG00000015199
UniProt:
A0A6P6PPZ3
LinkDB
All DBs
Position
7:8965718..8968968
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AA seq
292 aa
AA seq
DB search
MYSMMEHELKTAGQPHPHHNSPGMSPPVSGVGNAHHGSKTSCPPGGDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDTEKRPFIDEAKRLRAVHMKEYPDYK
YKPRRKTKALMKKDNPVGKYPLAAGNLLASAVAQGQGGSPRMDGYGWGHTGAYMGMQGEA
LGYPQQLHRYELSALQYPPAQTYMNGAGSYSQMSYSGSPQNPSSVMSMVKPEPLSHSPTG
VPNHHRGAFQGDLRDMISMYIPGSDNSDTSNQRAYPGVQQHYLGGTVPLTHI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagcatgaactgaagaccgcgggtcaacctcatccccaccacaac
agtccggggatgtctcctccggtcagcggggttggaaacgcgcaccacggatcaaaaacc
tcttgtccacccggcggggaccccatggacaaagtgaagcgccccatgaatgcgtttatg
gtgtggtcccgaggtcaacggaggaagatggcacaggagaaccccaaaatgcacaactct
gagataagcaaacgtcttggtgcggaatggaaacttttaacggacactgagaagcggccg
ttcatcgatgaggccaaacggttgcgggccgtacacatgaaggaataccccgactacaaa
tacaaacctcggcgcaagaccaaagccctcatgaagaaggacaaccccgtcggtaaatat
cccctcgcagccggtaacctgctggcatcagccgtggcacagggacaaggcgggagcccg
agaatggacggctatggctggggtcacaccggtgcttatatgggaatgcagggtgaagcg
ctcggatacccgcaacaactgcaccggtacgagctgtcagctctccagtacccgccggca
cagacctacatgaacggagccggctcttacagccaaatgtcatatagtggcagccctcag
aatcccagttcagtgatgtctatggttaaaccagaacccctatcccattcgcctactgga
gtaccaaaccaccaccgtggggctttccaaggggacctaagggacatgattagcatgtat
attccaggcagtgataacagcgatacctcaaaccagagggcctatcctggagtgcagcag
cactatcttggtggaactgttcccctcactcatatctga
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