Carassius auratus (goldfish): 113105776
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Entry
113105776 CDS
T07313
Name
(RefSeq) protocadherin-18-like isoform X1
KO
K16499
protocadherin delta 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113105776
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113105776
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Syndecan
Motif
Other DBs
NCBI-GeneID:
113105776
NCBI-ProteinID:
XP_026122844
Ensembl:
ENSCARG00000002770
UniProt:
A0A6P6PPZ5
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All DBs
Position
1:complement(26115545..26123214)
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AA seq
1135 aa
AA seq
DB search
MDTSKSTVFYATLLKLAVLVILARHVSAQTLKYQVYEEQKVGTVIARLRDDVADVLSKLP
SSIPLRFRAMQRGSASLLSVRDQDGEISIRTKIDREKLCEKNLNCTIEFDVLTLPTEHLQ
MFHIEVEILDINDNAPQFARPVIPIEISETAAVGTRIPLDSATDPDVGENSLNTYSLTSS
DFFMIDILTRTDGAKYAELVVLKELDREVRASYELQLAASDRGVPPKFGTTLLKISIADS
NDNNPVFEKPSYVINLLENSPLGSLLIDLNATDPDEGTNGKIVYSFSSHVSPKILETFKI
NSDNGQLTLVRKVDFESTNSYDLDFQAQDMGPNSMPAHCKVIIKVVDVNDNKPDISINLM
STGNEEIAYISETAPVDTFVALVRVDDLDSGLNGEVECRLLGQGHFRLQKKYEKNYMILT
NVTLDREKRSEFSLTVIAEDKGSPSLSTIKHFTVQVQDENDNAPKFEKSRYEISTAENNS
PGAYLSSVRASDPDLGPNGQLSYSILECTVHGSSISTYVTIDPSNGDMYALRTFDREDVS
QISFLVQAQDSGSPPLHNNVTVVLTILDENDNRPVITMPQLWNHTADVPVSKYAEVGDVL
TIVRAIDYDAGANGDISCSVVGGNEAGYFAMDAKTCEIQTNVSMQDIPQDHVELTILVQD
HGAQPLSARALLRLSLYENIENHMNPHLTGRGSGDGPLDVSMIIIISLGAICAVLLLIMV
AFALRCSREKKDIRSYNCRVAESTYQQHPKKPSRQIHKGEISLVPTVNGTLPIRAHHHSP
TSSPGPERAHMGSRQSQHSRQSLNSLVTISSNHIPENFALELTHATPPVEQVSQLLSILH
QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSDAGDSDCEMGRDSPIDRLLGD
GFGDLFHIDGHQRLHPAVMRLCTEECRVLGHSDQCWMPSQASSDYRVNMYIPGEESRPQV
LEEDQQSVDSAKKSFSTFGKDNEEECGSSLLSEMNNVFQRLLPTSYAEVSELEGCAGLPT
SPIGMEIRKGFLPGKASSTGPAYPQGVAVWAANTHFQNPGSAMMSGHGSTNHAVSQAHLK
WLPAMEEIPENYEEDDIESVLSQRQGKRNETRHEVVDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggataccagcaagagcacagtgttctatgccactttactcaaacttgctgtgctcgtt
atattggcacggcacgtctcggcgcaaactctgaaataccaagtttacgaagagcagaag
gtgggtacagttatcgccagacttcgagatgatgtcgctgatgttttgtccaaacttccg
agctcgattccgttacgctttagagccatgcagcgcggcagcgcgtctcttctctccgtg
cgcgaccaggatggagagatcagcatcaggaccaaaatagaccgcgagaaactgtgcgaa
aagaatctcaactgcactatagaatttgacgtcctcaccctccccacggagcacctacag
atgttccacatcgaagtggaaattctggacattaatgacaatgcgccacagttcgcgcgc
cccgtcattcccatagagatctccgaaaccgctgccgtagggacgcgcattccccttgac
agcgccaccgatccagacgtcggggagaactctctgaacacatactctctgacctcgtct
gacttttttatgattgatattctaaccagaaccgacggcgccaagtacgcggagctcgtt
gtgcttaaagagcttgatagagaggtacgagcgagctatgaactccagcttgcagcctca
gacaggggcgttcccccaaaatttggaaccacgctcctgaaaatcagcatagctgactcg
aacgacaacaatccggtgtttgagaagccatcttatgtgatcaacttgcttgaaaattct
cctttaggcagtttgcttattgatctgaatgctactgacccagatgaagggaccaatggg
aaaattgtatattcttttagcagtcacgtgtcacctaaaatcttagagacttttaagatt
aattctgataatggtcagttgacactggtgaggaaagtagactttgaaagcacaaattcg
tatgacctagattttcaagctcaagacatgggtcccaattcaatgccagcacattgtaaa
gtcataataaaagtggtggacgtgaatgacaacaagcctgacattagtatcaatttgatg
tccacagggaatgaggagatagcttatatatcagagacagctcctgtagatacatttgtt
gctttggtgagggtggatgacctggactctgggttgaatggagaggtggagtgccgtctc
ctcggccagggtcatttcaggctgcaaaagaaatatgagaagaactacatgatccttaca
aatgtcactctggatcgagagaagaggtcagagttcagcttgactgttatagctgaagac
aaaggctctccaagtctgtcgaccatcaaacacttcactgttcaggtccaggatgagaat
gacaacgcaccaaagtttgagaagagcaggtatgagatttccacggcagagaacaactca
ccaggagcttatctgtcatctgtgagggcctcagatccagacctgggcccgaatggtcaa
ctgagctactctatacttgaatgtacagtccatgggagctccatctccacttacgtaacc
attgacccctctaatggagacatgtatgcgctacgtacttttgatcgcgaagatgtgagt
cagatctcgttcttagtccaggcccaagattctggaagtcctccgctgcataataatgtg
acagttgtgttgaccatcttggatgagaacgacaacagaccggtcatcacgatgcctcag
ctgtggaaccacacggctgatgttccagtatccaaatatgcagaggtcggtgacgtgtta
actattgtccgcgcgatagactatgatgctggcgccaatggtgatatttcgtgctctgta
gtagggggcaacgaggcaggttacttcgctatggatgctaaaacatgtgaaattcagacc
aacgtcagcatgcaggacattccacaggatcacgtggagctgaccatcctagtgcaggac
catggtgctcagcccctcagcgccagagcactactgagactttcgctttatgaaaacatt
gagaaccacatgaacccccatctgacaggtagaggaagtggagatggccctctagatgtg
tccatgatcatcatcatctcccttggtgcgatctgcgccgttctgcttctcatcatggtg
gcctttgcccttcgctgctcacgtgaaaagaaggacatccgctcatacaactgcagggtg
gctgagtctacttaccaacagcaccccaaaaaaccctcacggcagatccacaagggtgaa
atcagtctggtgcccactgtcaatgggaccctcccaatccgggcacaccatcactcacca
acctcctcgcccggacctgaacgggcccacatgggcagtcggcagagccaacacagccgc
caatcactgaacagcttggtcactatttcctccaatcacatccctgagaacttcgccctg
gaacttacacatgccacgccccctgtggagcaagtctcacagctcctctcaatactccat
cagggtcagtatcagccgcggcccagcttcagagggaacaaatactctcgcagctacagg
tacgccctccaggacatggataagttcagtctaaaagatagtgggcgtggcgacagtgat
gcgggcgacagcgactgcgagatgggccgtgattcgcccatcgaccggttgctaggcgac
ggcttcggagacctcttccacatcgacggacaccagcgtctccacccagcagtcatgaga
ttgtgtacggaggagtgccgtgtgttgggtcactctgaccagtgctggatgccatctcag
gcgtcttcggattaccgtgtgaacatgtacattcccggagaagagagcaggcctcaggtc
cttgaagaggaccagcagtcagtcgactcagctaagaaaagcttttctacctttggaaaa
gacaacgaggaggaatgtggcagttctctgctgtcagaaatgaacaatgtcttccaacgt
cttctgccaacttcctacgctgaggtcagtgagcttgaaggatgcgctgggttgcccact
tcccccatcggcatggagattagaaagggcttcttgccgggtaaggcatcatctacaggc
cccgcctaccctcagggtgttgctgtgtgggcggccaacactcactttcagaatcctgga
agtgccatgatgagcggacatggctcgaccaatcacgcggtatcacaggcacatttaaaa
tggctgccggcgatggaggagatcccagaaaactatgaagaggacgacatagagagtgtg
ctcagccagcggcagggaaaacgcaacgaaacgagacacgaggttgtcgacgctagcgaa
ctggttgccgaaattaacaaattgcttcaggatgtacgccagagttaa
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