Carassius auratus (goldfish): 113105863
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Entry
113105863 CDS
T07313
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113105863
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113105863
Factors involved in mRNA localization
Other mRNA localization factors
113105863
mRNA cycle factors
Stress granule specific factors
113105863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
Agenet
KH_1
KH-I_KHDC4-BBP
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
113105863
NCBI-ProteinID:
XP_026123002
Ensembl:
ENSCARG00000002456
UniProt:
A0A6P6PQG6
LinkDB
All DBs
Position
7:11118063..11138526
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AA seq
677 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPAEYHKDIC
EGDEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPVNPNSP
SSENSFYKVPIAVPEDLRDICLTENIHKDFRKAIGANCIFYNTFTHQLIVLSTSECTVKR
AALLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGITAIELEEESCTFRIYGETPEAVKQARTYLEFMEDSFPVPRNLVGKVIGKN
GKIIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDNTVSSQEGTVPFIFVGTKENI
SNAQALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRSGSGVTGERERGYLTD
DSTNSLQTTRTYGGRGRGRKPNNAYSGYGTNSELSNASETEEIAERELRPKGVGGDDRGS
KRGGRGRGTSASRGRGGPGPRNTNTISSVLRDPDSNPYSLLEGEAELGADTDASESMGGT
DRRRRSRRRRNDQEPSLIDAAANESDSQAAASENGLEEEGRPQRRNRSRRRRTRGSRPEG
GSTSRDRQPITVADFISRADSQSRQNLPVKNEVIQHTSHPKENGTSVRQEECTAPKRSPS
NGVASPGEALALVNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggcggtggaggtgcgcggctctaacggggccttctacaagggtttcatc
aaggatgtacacgaggactccctcacaatagtctttgaaaacaactggcaaccagagaga
cagctgccgttcagtgacgtgaggttgccacccccagccgagtaccacaaggacatctgt
gagggagatgaggtggaggtttactccagagccaacgagcaggagccctgcggctggtgg
ttagcgagggtgaggatgatgaagggagagttctatgtgatcgaatatgcagcatgcgac
gccacatacaacgaaattgtcacatcggagcgaatccggccggtcaatcccaacagcccc
tcgtctgaaaactccttttacaaagtccccatcgctgttcccgaggatctccgagacatc
tgtttgactgagaacattcacaaagacttcaggaaagcaatcggagccaactgcatcttc
tacaacacctttacacaccaactcatagtcctgtccacgagcgagtgcacggtgaaacga
gcagctctactgagtgacatgcacttcaggagcattcgcaccaaactcatgctgatgtcc
cgcaacgaggaggccaccaaacacttagagacaagtaaacagctggcgtctgcgtatcag
gaggaagtgagggtgcgtgaggatctaatgggtctggccatcggttctcacggtgccaac
atccagcaggcccgaaaagttcccggcatcactgccattgagctggaggaagagagctgt
acattcaggatctacggagagaccccagaggctgtgaagcaggccaggacgtatctggag
ttcatggaggattccttcccggttcccaggaaccttgtaggcaaagtcattggcaaaaac
ggcaaaataatccaggagatagtagacaaatcgggcgtggttcgagtgcggatcgaaggg
gacaatgataaaaagctgcccagggaggaggtaggcaggcagggggctggcagagacaac
actgtgagcagccaagagggaacggttcccttcatctttgttggaaccaaggagaacatc
agtaacgcccaggccttgctcgagtaccacgtggcctaccttcaggaggtggagcagctg
cgtcttgagcgcctacagatcgatgaacagctccgtcagattggggtgggataccgcgca
ccccccagccgctccggttcaggggtcaccggcgagcgtgaaagaggttacctcacggac
gacagcaccaactccctgcagaccacacgcacctatggaggaagaggacgaggacgcaaa
ccgaacaatgcatactctggctatggaacaaactctgaattgtcaaatgcatcagagaca
gaagagatagcagagcgagagctcaggcctaaaggtgttggaggagatgacagaggctca
aagcgaggaggacggggccgtggcaccagtgcaagcagaggccgtggaggaccagggcca
cgaaacaccaacactatcagctcagtgctccgagatcctgacagtaacccgtactctctc
ctggagggagaagctgaattaggcgctgacacagatgccagtgaaagcatgggcggcact
gaccgtaggagacgttcacgccgtcggagaaacgaccaggaacccagccttatagatgca
gccgctaatgaatctgacagtcaggcagccgccagtgagaacggactggaagaggagggc
aggccccagcgccgcaatagaagccgccggcgtcgcacccgaggcagtcgtcctgaaggg
ggctccaccagccgcgacagacagccaattaccgttgctgacttcatctctcgtgctgat
tcccagagcagacagaatctcccggtgaagaacgaggtgatccagcacacgtcccatccc
aaggaaaacgggactagcgtgagacaggaagagtgcactgctccgaagcgctcccctagc
aatggcgtagcttcgcccggggaggctctagccctggtgaatggggtctcgtaa
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