Carassius auratus (goldfish): 113105957
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Entry
113105957 CDS
T07313
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113105957
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
113105957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
ig
CarbopepD_reg_2
TSP_1
CarboxypepD_reg
TSP1_CFP_C
V-set
Motif
Other DBs
NCBI-GeneID:
113105957
NCBI-ProteinID:
XP_026123166
Ensembl:
ENSCARG00000040796
UniProt:
A0A6P6PNI9
LinkDB
All DBs
Position
7:complement(12577863..12584989)
Genome browser
AA seq
1171 aa
AA seq
DB search
MGCLSTWTFLLLLLGITKTFSQGTWRSIMGTSLRPNPAVYHNEDNYEWTTWFNVDHPGGK
GDYEKLNAIRFYYRARVCEVPRALEARTTEWIPARSTGERVHADPAVGFWCVNDEQHFGR
NCSNYAVRFLCPKEIVSDVEEVIWGPWSDWSLCPSQCDQVAIQHRSRSCKSNFKQCNGQT
VEARSCQGPPCPRCELHCVMGKVNDECDGCMCQDHTVLGSVRSAGGLPAPGAAILRAGPR
PKFFTVTDHNGHFQVPGICPDANTTLMIKLKNHAPLQVTVPLSTERTSVLLLKLERAKKL
YVLKNPESKARREGQTAAFCCKVDGTPEPNQYEWFHNGTLLDRSQYQYDETLVLRNVSLD
HIGEYYCRASNENGAIKSKAATLTVIGQKAPSCNPKPYSHLIRLPHDCIQNETNSIYYDV
GRCPTSTCTGKLDNGIRCKDSVSYCCGISNMEEKEITCQGYQLPIMVVTQCGCKTCVDTK
AIVRGRAIAADTGEPMRFGHIYMDGTRISRTGYKGTFSIQVPTNTERLVLTFVDNMQKFV
NTTKVLPFNPKGGAVFYEIKLLRKKPAVIISSRETNKLDLGELEGQDPIAEIEIPPNAFY
KENGEVFMGNVKASVTFLDPRDVSTAAAAQSDLNFIGDEGDTMPLRTYGMFSVDFRDEEG
GESLNAGEVKVRLDAAQVKMPEHLKTMKLWSLNPDTGLWEEEGQFHAEKKQRGKREERTF
LIGNMEIRERRLFNLDVPENRRCYVKVRAFRSERYMPSEQSEGVVMTLINMEPTPGFSTN
PRAWGRFDSVITGPNGACLPAFCDEQKSDAYSAYIMANLGGEELDAVASSPKLNPNTIGV
PQPYLNKLNYRRTDHDDPRIKKTAFSINVAKPRSNVAEEANGPVYSFDKLKECEEAPFSA
AHFRFSRVEGDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYIKVKLNSVHELNVR
SRNMGGTHPKTVGQLYGIRDTRSIRDMDQSTVSAVCLEFKCSGMLYDQDRVDRTLVKVMP
QGSCKRDSVNSMLQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKE
IALGRCFDGTSDGTSRVMKSNEGVALTFTCGDKEVTRQSMFQQIQNSLGQATAGSARPSR
GNRRQRVDSTVPRNSRRRSTRNSYTRAQTIG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtctctcaacctggacctttcttctgcttctgttgggaataacaaaaaccttt
tctcaagggacatggagaagcatcatggggacatcattgagaccaaacccagctgtgtac
cataatgaagataattatgagtggaccacatggttcaatgtagatcaccctggagggaaa
ggagactatgagaagctgaatgccattcgtttttattatcgagctcgtgtttgtgaggtt
cctcgagctctagaggcacgtactactgagtggatcccagctcgcagcactggggaaaga
gtacatgctgacccagctgtgggcttctggtgtgtcaatgatgaacagcattttgggaga
aactgctcaaactatgctgtacgtttcctgtgtcctaaagaaattgtttcagatgttgaa
gaagtgatatggggtccatggtcagactggagtctgtgtccatcacagtgtgatcaggtt
gcaatacagcatcgctctagaagctgcaaatccaatttcaaacaatgcaatggccaaact
gtcgaagccaggtcatgccaagggccaccttgcccacgctgtgaactgcactgtgtgatg
ggcaaggtaaatgatgagtgcgatggctgtatgtgccaggatcatacagttttaggatca
gtacgtagtgccgggggtctccctgcacctggagctgccatcctccgtgctggtcctagg
cccaaattcttcactgtaactgatcacaatggccattttcaagtccctggaatctgccct
gatgccaacacaacgctaatgatcaagctaaaaaaccatgctccactccaagtcactgtt
cccttgagcactgaacgcacctccgttctccttttgaagctagagagagcaaaaaaactg
tatgtgttgaaaaaccctgagagcaaggccagaagggaaggtcagacagctgccttctgt
tgtaaggttgatgggacacctgaaccaaaccagtatgaatggttccacaacggtactctg
ctggacaggagtcaatatcaatatgacgagacactggttttgaggaatgtcagtttggac
catataggagaatactactgcagagccagtaatgagaacggagcaatcaaatctaaggca
gccaccctcacagttattggtcaaaaagcaccatcatgcaaccctaagccttattcccat
ttgattcgactaccacatgactgcattcaaaatgagaccaactctatctactatgatgtg
gggagatgcccaacatctacatgcacagggaagctggataatggcatcagatgcaaagac
tcagtttcctattgctgtggaatttcaaacatggaggagaaagagattacatgtcaggga
tatcagttgcccatcatggtagtgactcagtgtggttgtaaaacatgtgtggacacaaag
gctattgttcgtggacgtgctatcgcagcagacactggtgagcccatgaggtttggacac
atctacatggatggcacaagaataagtcgaaccggatacaaaggcacattctctatccag
gtaccaacaaatacagagcgtctggtcctcacctttgtagacaacatgcagaagtttgtg
aataccacaaaagtgctaccattcaatccaaaaggtggagctgtgttttacgagatcaag
ctgttgaggaaaaagccagctgtgattattagctcaagagagactaataagctagatcta
ggtgagttagaaggtcaggatcccattgctgagatcgagatccctccaaatgcattctat
aaagaaaatggagaggtgttcatgggaaatgtcaaggccagtgtgactttcctcgacccc
agggatgtatcaacagcagcagctgcccaaagtgatctcaacttcattggtgatgaaggt
gacactatgcccttgagaacctatggaatgttctctgtggacttcagggatgaagaagga
ggtgagtcgctcaatgccggagaagtgaaagtgcgtctcgatgcagcacaagtgaagatg
cccgagcacttgaagaccatgaaattatggtcccttaatcctgatacaggtttatgggag
gaggagggccagttccatgctgagaagaaacaaagggggaaacgagaggagaggaccttc
ctcataggtaacatggaaatccgtgagagacggctgtttaacttagatgtacctgagaac
aggagatgttatgtgaaagtgagggcttttcgtagtgaacggtacatgcctagtgagcaa
agtgaaggagtcgtgatgactttaataaatatggagcccacgccagggttttcaaccaac
cctcgggcttggggtagatttgatagcgtcatcactggcccaaatggtgcatgtcttcca
gccttctgtgatgaacagaaatcagatgcatattcagcctacatcatggccaacctgggc
ggagaagagctagatgcagtagcatcctctccaaagttgaatcctaacaccattggcgtt
ccacaaccctatctgaataaactaaactacagacgcacggaccacgatgatcccagaata
aaaaagacagcattcagcatcaatgtggccaaaccccggtcaaacgtggctgaggaagcc
aatggtccagtttattcatttgacaaacttaaagagtgtgaggaagctccattcagtgca
gctcacttccgtttctcaagagttgaaggagatcggtacgattacaacacagtgcctttt
aatgaggatgaccccatgagctggactgaagactatttgagttggtggccaaaacccatg
gaatacagggcttgctacattaaagtaaaacttaacagtgtccatgagctcaacgttcgg
tctcgcaatatgggaggcacccatcctaaaactgttggccaactgtatggcattcgtgac
acaagaagcatccgagacatggaccaatcaactgtttcagcagtgtgtctggagttcaag
tgcagtgggatgctgtatgaccaagaccgagtggatcggactcttgtgaaagtaatgcct
cagggcagctgtaagcgagacagtgtaaacagcatgctacaggaatacttggtgaaccac
cttccactggctgtcaacaatgacacaaatgagttcactatgcttgcacctctagaccca
ctgggccacaactacggtatatatacagtgactgaccaagatccgcggacagccaaagaa
attgcgcttggccgttgctttgatggtacttcagatggcacctctcgagtcatgaagagc
aacgaaggagtggcattaacattcacctgtggtgataaagaggtcactaggcaaagtatg
tttcaacagatacagaattcactgggtcaggccacagctggaagtgcacggccgtcaaga
ggaaaccggaggcagagagttgattcaacagtgcctcgaaatagtaggaggaggagtact
cgtaattcctacacacgtgcccagaccattggttga
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