Carassius auratus (goldfish): 113106020
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Entry
113106020 CDS
T07313
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113106020
Transcription factors [BR:
caua03000
]
Eukaryotic type
Other basic domains
RF-X
113106020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
113106020
NCBI-ProteinID:
XP_026123315
UniProt:
A0A6P6PSS8
LinkDB
All DBs
Position
7:14193494..14220276
Genome browser
AA seq
1501 aa
AA seq
DB search
MADDQQQPGAGAGAGALPSAVQGLQGAEANALQLKIKSSICKTVQSKVDCILQDVENLTD
IEKLYLYLKLPSGTSSGNEKNEQSSISSSRTQQLHAFSWIRSHLEEHPETSLPKQEVYDE
YKSYCDSLGYHALSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKRAFVQMPSLPN
LDLHKSGDGCEVFEPTGQLSSAEDEVRVAACGLVCEWAQKVLSRQFDSVEDLARFLLNSH
YIGTKSVAALTVMTGSPSGAKLSIQSSAFAPTTDAHSFQPQVKTLVSPSVDAKQQLQRKI
QKKQQEQKLHSPLPGEAQARRADGGITPGARTGIPCGSPALLSPQPIGIVVAAVSSPITV
QRSRQLLSPSPVPIGAADSKVLPVNFQVVTQSVHPVKQCPKTPHNISASPISDRSARHRY
PQILPKPSASSGITLRSPTLLITNSPIKTVMSTPHVSSVNVVKMTTISLGSNGSGTSTLA
DTPASNKVRPASAGVASINDDPQPVTRVRSGSIAVMPSVLARLGSSASTTPVINTKTNTE
AIIGSGQEHGSTSRLATTLDTVGSVQRSGIFKPRAASVPTPLDKDSLGLDTLTGTKCSER
TLLSVKTLSVGSNNSSNTNESTLYRNTSSTHSNSGNGVVTSPKDSVLATRSPHKRPSLCT
DLSPTPVKKAHISVLPAGGSDGLKSNIMAKQIPRSSTPIRTESAPLKVTGKAIACPVRNT
GFQTVHRPQSISQGRWEGASSVMDYRVPVTSTAGQDTSVGNTMFQTVCRPRSISQGRWEG
SSTGVEGRAVVTRTVSAPGQALLQQVAKKSQDLLIDQPDSSATYELKSVFWDSELQDATQ
QHQEVYGPQMASEPKQMSTPLMEPLPAIAQASSSNQQAQMSDYRTQANLSYFPFDDDMTQ
DSIVEELVQMEEQMKINSSIQSFSNCVDNSLQGQQQTMQTTMMSTLQTNTLYYSSAHSSS
TPIQTPTPTPTPTSEMIGSGQGMMHESPCSRLAPTTPVDSALGSSRQTPIGTPHSNCSSS
IPPSPVECRNPFAFTPINSSITGYHDGSIVSSSPVKPMQRPMATHPDKTKLEWMNSGYSN
SGGNTNNGISILPSYQDLVDDHFRKPHAFAIPGQTCQSQNRYHDTHISRLTPISPVQQQV
ASMASLNRKEGFAVPAPLDNKASSGSGTFRCRSVSPAVRQRNLSGTQNPSVPHSVVSPFN
SPVTPEVLNIFSNSDPDASISSMAQRSQSVPVTVMMQSEVLPMQAGQQMNTKNISNVLIN
KMDGDGDDSVRGLGINNMPSNYTARMNLTQILETTTVPSFPGSASHQALISPCSSAFESQ
KPSYLMKNAREEPMSFSVDESQAQSASGEHQSRQQQQHLGRRQLLGQKQQSQAMLLPLQQ
SLQQHQHQQPLDLDRTVKDLLHEESLNAGCVGQGSELRAGSSVFPSDMRLTSELTGNIND
LNTLDTNLLFDPSQQQGQYEDSTLEELNNDPLFQQICSETVNSAGFDWLENKDQATVEML
G
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaccagcagcagcctggagctggagctggagcaggagctttaccttccgcg
gttcaaggactgcagggagctgaagccaatgcgttgcagctaaaaataaagagctcgatc
tgcaaaaccgtacaatcaaaggtggattgcattttgcaagatgtggagaatcttacagac
attgaaaaactctacctctatctgaagttgccttctggaaccagcagtggcaatgagaaa
aatgagcagagctccatttcatcgagtcgtacccagcagttgcatgcatttagctggatt
cgcagccaccttgaagaacatcctgaaacatcgctgcctaaacaagaagtctacgacgag
tacaagagttactgtgatagcctggggtatcacgctctcagtgctgcagactttggaaag
atcatgaagaacgtctttcccaacatgaaggcacgtcgacttggcatgcgaggcaaatcc
aagtattgctatagtgggcttaggaagagggcttttgtacaaatgccatctcttcccaac
ctagatcttcacaaatcaggtgatgggtgtgaagtgtttgaacctactggtcaactgtcg
agtgcagaagatgaggtgcgtgtggccgcatgtgggttggtgtgcgagtgggcacagaaa
gtgctaagtcggcagtttgacagcgttgaggatctggctcgatttctcttgaacagccac
tatattggaactaagtctgtggctgctcttactgtgatgaccggttccccatcaggagca
aaattgtccattcaatcatctgcatttgctcccacaaccgatgcacactcattccaacca
caggttaaaaccctggtctcaccctcagtagatgccaaacagcaactacaaaggaagatc
cagaagaagcagcaagaacagaaactgcattctccactccctggtgaagctcaggccagg
agggcagatgggggcataactcctggggcaagaacaggcataccctgtggaagccctgct
cttctctcacctcaacctattgggattgtggttgcggctgtttccagccctatcacggtt
cagaggagcaggcagttgttgtctcctagccctgttccaattggagctgcagacagcaaa
gttcttcctgtaaactttcaagtggttacccagtcagtgcaccctgtgaagcagtgcccc
aagacacctcataatatttcggctagtccgataagtgaccggtcagcccgtcatcgttat
ccccaaatcctgcccaagccatctgcctcaagtggcataaccctgcgctcaccaacattg
cttatcaccaacagccccatcaagacggtgatgtcaactccgcatgtcagttcagtcaat
gtagtcaagatgacgactatatctctgggctctaatggcagtgggaccagcacactagct
gatacccctgctagcaacaaagtcagacctgcatctgctggagttgccagcatcaatgat
gatccacagccagttacacgtgttcgcagtgggtctatagctgtaatgccatctgttttg
gcaaggttaggcagctcagcatccacgacccctgtcatcaacactaaaacaaatactgaa
gccataattggaagtggtcaagagcacggtagtacaagtagactggcaaccactctggac
accgttggtagtgtacagcggtcagggatattcaaacccagagcggctagcgtacccact
cctcttgacaaggactctctgggattggacactctaacagggaccaaatgcagtgagagg
acactccttagtgtcaaaactctgtctgttggcagcaataattcgtccaacactaatgaa
agcactttgtaccggaacacaagtagcactcattcaaacagtggtaatggggttgtgaca
tcacccaaagattcagtgttggcaaccaggagccctcacaaaagacctagcttatgcact
gatttgagcccaacacctgttaaaaaagcccatatttctgttctaccagcaggtggatcc
gatggactgaagtcaaacataatggcaaagcaaattccaagatcaagcactcctataagg
acagaaagtgcacctctcaaagtgacaggcaaagctattgcatgtccggtcaggaatact
ggcttccagacagttcacaggcctcaaagcatctcccagggaagatgggaaggagcttca
tcagtaatggattacagagttcctgtcacctctacagcaggtcaggatacttcagtgggg
aataccatgtttcagactgtttgcagacctcgaagcatctcccaagggagatgggaagga
tcttcaacaggtgtcgaaggtagagctgtggtcaccagaactgttagtgctccaggacag
gctttgctgcaacaagtcgccaaaaagtcacaggatttgcttatagaccagcctgactct
tctgccacatatgaactgaagagtgtattttgggatagtgagctgcaagatgctactcaa
caacatcaggaagtttatggcccgcaaatggcgtctgagccaaagcaaatgtccacccca
ttgatggagccccttcctgcaattgctcaagcctcttcttccaaccagcaggctcagatg
agtgactatagaacccaggccaaccttagctactttccgtttgatgatgacatgacccag
gatagcattgttgaggaacttgtacaaatggaagagcagatgaaaattaacagtagcata
caaagtttcagcaactgtgtggataattcactgcaaggccagcaacaaaccatgcagact
accatgatgtccaccctccagaccaacaccctgtattacagctctgctcatagcagcagc
actccaatccaaacacccactcctacacctactcccacttctgagatgatcggaagtggt
caaggtatgatgcatgaaagcccctgttcgcgcttagccccaaccactccggtcgacagc
gctcttggaagtagtcgacagacacctattggcactccccactccaactgcagcagtagt
atcccaccaagccctgtggaatgcaggaacccttttgcctttactcctattaactccagc
atcactggataccacgatggaagtatcgtctcctcaagccctgtcaagccaatgcaaaga
ccaatggccacacatccagataagactaaactggaatggatgaacagtgggtacagtaac
agtggtgggaacaccaacaatggcattagcattctgcccagctaccaagacctagtagat
gaccactttcgaaagcctcacgccttcgccatcccaggccagacctgtcagtcgcaaaac
agatatcatgacactcatatcagccgcttgacacccatttcacctgtccaacaacaagtg
gcaagcatggctagcctcaacaggaaagagggttttgctgttccagcaccccttgacaac
aaggccagctcagggtctggaacatttcgatgccgcagcgttagcccagcagtcaggcag
cgcaacttgagcgggacccaaaatcccagtgttccccactctgtggtctcacctttcaac
tcacctgtaacacctgaagtgctaaacatcttttctaacagtgaccctgatgcaagcatc
agcagcatggcacagaggagtcagtctgttccagtcacagtgatgatgcagtctgaggtt
ctacccatgcaagcaggccagcagatgaataccaaaaacatcagcaatgtcctcatcaac
aaaatggatggcgatggagatgactctgtacgtggcctcggaatcaacaacatgccatcc
aactacaccgcccgcatgaatctcacccagattctggagaccaccacagtgcccagcttt
cctggtagtgccagccaccaagctctgatctcgccttgttcatcagcctttgagtcccag
aagcctagttacctcatgaaaaatgccagagaggagccgatgagcttctctgtagatgaa
agccaagcacaatcagcctcaggggagcaccagtcacgacaacagcagcagcacttaggc
agacggcagctccttgggcagaaacaacagagtcaggccatgcttttgcctctacagcaa
agcctccagcagcatcagcaccagcaacccttggatttagacagaactgttaaagatctt
ttacatgaggaaagcttgaatgctggctgtgtggggcaaggatcagagctccgtgctggg
agttcagtgtttcccagcgatatgcgactaacctcagagcttaccggtaacataaatgac
ttaaatacattggacaccaaccttctttttgaccccagtcaacagcaaggacaatatgaa
gactcgacactggaagaactgaacaacgacccactttttcaacagatatgcagcgagact
gtgaattctgcgggctttgactggttggagaacaaagaccaggcaacagtggaaatgttg
ggttaa
DBGET
integrated database retrieval system
