Carassius auratus (goldfish): 113106048
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Entry
113106048 CDS
T07313
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113106048
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113106048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
113106048
NCBI-ProteinID:
XP_026123362
Ensembl:
ENSCARG00000030763
UniProt:
A0A6P6PRC4
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All DBs
Position
7:15136121..15139565
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AA seq
455 aa
AA seq
DB search
MSFPQLGYQYIRPIYPQDRQGIGSARAGTDLSPSGALSNVLSTMYGSPFAAAQSYGAFLP
YSNDLSIFNQLGAQYELKDSPGVQHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEE
GNVYNSDHEGEDGDKREDEEEIDLENIDTENIENKDDLDEQDELHSDLKLDGRSDSEISD
GYEDLQGPEQRLFKAMVKDGKEIHGDRAEHFHNHSHHHHHHHHNNLEQANSEPVKLNQAI
INSPPSENNPPPAPKPKIWSLAETATTPDNPRKSPLMNGTSAASAAQTIITPHRLLSCPV
GKIQSWANRGFTAHQLALLNSNHYLGLSNQASANGLALYSRQTEDRSQNSESTVTERSSA
LEAEKKLLKTAFHPVQRRPQNQLEAAMVLSALSSS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagttgggatatcagtatatccgacccatatacccgcaggacaggcag
gggataggcagtgcccgagccgggacagacctgagcccgtccggggcgctctctaatgtt
ctctccactatgtacggatcacctttcgctgccgcacaaagctatggagcttttcttcct
tattcaaatgatctgtccattttcaaccagctgggggcacagtacgaactgaaggacagt
ccgggcgtccagcatcctggatttgcccaccatcatcctgctttttacccatatggtcag
taccagttcggagacccttccagacccaaaaatgccaccagggagagcaccagcacgctc
aaggcctggttaagtgagcaccggaaaaacccgtaccctaccaaaggcgagaagatcatg
ctggccattatcaccaaaatgaccctcactcaagtgtccacctggttcgccaacgccagg
aggaggctaaagaaggagaacaagatgacctgggccccacggagtcgcacggacgaagaa
ggaaatgtttacaacagcgatcacgagggagaggacggcgacaaacgcgaggatgaggag
gaaatcgatttggaaaatattgacacggagaatattgagaataaggacgatttagacgag
caggacgagctgcattctgatttgaaactggacggcaggagcgactctgaaatttcagac
ggctatgaggatttacaaggaccggagcaaaggttgttcaaagcgatggtgaaagacggc
aaagagattcacggcgaccgcgcagagcactttcacaatcacagccatcatcatcatcac
caccaccacaacaacttagaacaggccaacagcgaaccggtcaaactcaaccaggccatc
atcaactctccgccctcagaaaacaacccacctccggctccaaaacctaagatctggtct
ttggcagagaccgccacaactccagacaatccacgaaaatctcctctgatgaacgggact
tccgctgcgtccgccgctcagaccatcatcactcctcacagactcctttcgtgtcccgta
gggaaaatccagagctgggcaaatcggggtttcaccgcacaccagctcgccttgctgaac
tcaaaccactatttaggactcagtaaccaggcttcggcaaatggccttgccctgtacagc
agacaaacagaggacaggagtcaaaactccgagtccacagtcacagaaagatctagtgcc
ttggaagcagagaaaaagttgttaaaaacagccttccatcctgttcagagacggccccag
aaccaactcgaagctgccatggtgttatctgccctctcgtcctcgtag
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