Carassius auratus (goldfish): 113106050
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Entry
113106050 CDS
T07313
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9-like isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113106050
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113106050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
113106050
NCBI-ProteinID:
XP_026123364
Ensembl:
ENSCARG00000031394
UniProt:
A0A6P6PRD6
LinkDB
All DBs
Position
7:15373393..15437348
Genome browser
AA seq
2949 aa
AA seq
DB search
MTDPIMDFFDDSSIFGGGLDSLVQDDPGFTPGSVSLDDELHLGPSLEPLQVDAGSRSTTI
QHGIPYNQPVRHFDTMKAQTSMEQSFPGPEGGNTGRTFLPQQQSFQGHTMNQVPQTNGLF
LHNSPMWGNHDQKGNNYHQHNQNHQQIHHQHLQHKQFQQQQQFQQHQAQHQQYSHQHLQH
RPHSLNQHPVSNQLQVPHQQIAHQSLHHVVKTYQEPTGFYYESNVPQNHSQHGHHNSLSV
EGSPFHSTVEASIMPVSSQLHSGFQIAQGVQDFTTGPRLEDNRLAFPVQSSPATHSFPTD
SVSHASSYPTAHYTLTDQPPPIVNSTQSYSSAPVSMTTSSMAIPSSASDLLDTGCPFLSN
SGMEHQQQRVQIPGSTAQRCPLNSSKSNQDTFSSSKVFPDGLNSFTADFPFSTAERRNHV
AAGPLVTNQSSSNGFQALEEVLLGEQHSHRLDLGDAPDLLADELLPQLEALDQDENSNHS
WVNIELEYEQEEDVKYNKGMEDVPMVYNAQPPKNTNGPSSQPRVLSPPVKSSSSSSSSSS
SYISVSEKRAQKRQQQQQQQQQQMEASLSDDKQQKANLIISEAIAKARERGEKNIPRVMS
PESFPSSSSQHRSHRARSSKSRGKDKSSKKARIVTSSKSKQKAQIGKIIIKLGKKKRKKT
DSSEELSDDDRPTRRSSKDDDSKRRSNRKVKRKKYEDDGEARFSDEEMKVIVKAKKTNSS
AQKQPSVQLFVENPTEEDAAVVDKIMASRVVKNEVSPGVMVETEEYFVKYKNYSYLHCEW
ATEQHLEKDKRIQQKIKRFKIKQAQRAHFFADMEEEPFNPDYVEVDRVLEVSYCEDKDSG
EPVVYYLVKWCSLPYEDSTWELNEDVDQTKIEEFKKLQAAKPHTNRVERPPASHWKKREQ
SREYCNGNCLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLDEICRTGIKGP
FLIIAPLSTIANWEREFRTWTKLNVIVYHGSVVSRQMLQQYEMYFRDAQGRVIRGAYRFQ
AVITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQ
NTVEELFSLLHFLEPNRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKL
APKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLI
KGAEEKILEDFKEVYSPAAVDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRC
LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAV
LQSMSGRDNSLGGGGQMQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQRR
TKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDMDTVNGRNSLVID
TPRVRKQTRPFSATKDELAELSEGESSGDDKPKLRRPHDRLNSYGRTECFRVEKNLLVYG
WGRWKDILAHGRFKRQLTERDVECICRALLAYCLVHYRGDDKIKSFMWDLIAPTEDGRTK
ELQNHLGLSAPVPRGRKGKKMKTQSSSFDIQKAEWIRKHNPEHMLSDDGYKKHLKHHCNK
VLLRVRMLYYLKQEVIGVQCQKVLDGADASEVEIWVPEPDHSEMPALWWDMLSDKCLLLG
VFKHGYEKYNTIRADPALCFLEKVGRPDDKAIAAEQRGNDFMDGDVDDPEYKPAPALLKD
DMEDDASSPGDLVITDTGGEGGSVLDGGGGTLGAGSGMYWPSPSALTARLRRLITASQRF
TKSKQILQIHQTQQAMTPAPYPLPPTISDTLNPKIAAKIERQQRWTRREEADFYRVVSTF
GVVFDPDLGCFDWTKFRAMARLHKKTDESLHKYLCAFIAMCRRVCRLPAIEGDMMDSSLA
IQPITEERASRTLYRVELLRKIREQVLRHPQLYERLALCQPGPDLPVWWETGSHDRDLLL
GAAKHGVSRTDYHILRDPELCFMAAQRNYSQNKGTAAQVQAQNQAPSLGQCHIPTPLQHF
QTKEASASPLPNQTELKEEPLSEGEEESGEQNPKTETPSIRPPTPSGVDEKDDIPKVGEN
ESRMVAARTKPLTPNSVTRKQKKLSKRSRREARRGSGSDSDSDGSSSSSSSSSSSRSSSS
SSSSSRSGSSSSTSSSSCSSGSSSSSSSSSSSSEDSDSEEVPKNASAVPGVKGFDEDSVA
SLNTTQDDMQDSHVTNGISNPPHPFQGGYMLAASYWPKDRVMINRLDSICQAVLKGKWPG
VRRAYEGNAVTSFYTTKLLDNTTPLTEDPSASPQGSKVKKHVADREKEFSVKINDQEGSL
KLTFQKQGLPLKRPLEGEEGPLAQQQYLARLQELQNASDTSLADYTKTQNNYPQVLPEQM
RQNGVMDGQPVIKKRRGRRKNVEGMDLLFMNRNRPPLMADQSPAGWSSSVASTSAPPGLS
TPQGPSTLDTECRVPVISLKDGTRLAGEDAPKRKDLDQWLKEHPGFVADVGAFIPTANKL
QFQDGRPKQKRHRCRNPNKIDINSLTGEERVQIINRRNARKIGGAFAPPLKDLSRFLQEN
PEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNALAKATTMTNASAN
AALGLNPLLTNGLLAGLDLPSLQALQHNLQSLQSLQLTTGLMGLPHDPTNMATMFPMMLS
GMTGLPNLLGMSGILGQQDTAGVALTSDEDGKKKSGGEAATHKGSAETLSPDGKAERTEG
QSSKATTSTAANSNQTSASASGHPLALNPLLLSSMLYPGMLLTPGLNLPVANQPQAANTQ
PTPPLQPAASEATAQLPGRSEDKDSDEGEEPDEKKDTSGPEGSAKAESSSSESDSSSESS
EDSDSSDED
NT seq
8850 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccatcatggacttctttgatgactctagcatatttgggggagggcttgac
agcttagtccaggatgatccagggtttactcctggttcggtgtccttggatgatgaactt
cacctgggtcctagtttggagcctcttcaggtggatgcagggtccagatctactaccatc
caacatgggataccctacaaccaacctgtgaggcattttgacactatgaaggcacagacc
tcaatggaacagtcctttcctggtccagaaggtggcaacaccggaagaacatttttgcca
cagcagcaatcatttcaagggcatactatgaaccaagtgccccagaccaatggactgttt
cttcacaacagccccatgtggggaaaccatgatcaaaaagggaataactaccatcagcac
aatcaaaaccatcaacaaattcatcatcaacatcttcaacacaaacaatttcagcagcaa
caacagtttcagcaacatcaagctcagcatcagcagtacagtcatcaacatcttcagcat
agaccgcacagcctcaatcagcacccagtttcaaaccagctgcaggtccctcaccaacaa
atagcccatcaaagcttgcatcatgttgtcaagacctatcaggaacctactggtttttac
tatgagagcaacgtccctcaaaatcattcccagcacggccaccataactcgctcagtgta
gagggtagtccctttcactctacggttgaggcctcaattatgcctgtgtcttctcaacta
cacagtggctttcaaatagcccagggggtccaagattttactacaggtccgaggttggaa
gataatagactggcctttcctgtccagtcttcccctgcaacccattctttcccaactgac
tcagttagccatgcttcatcctatcctactgcccattatactctgactgatcagcctccc
cctatagttaattcaacccagtcttactcctctgccccagtctctatgacaacctcttca
atggccatcccatcgtcagcttcagaccttctggatactggttgtcctttcctgtctaat
tctggaatggaacatcagcagcaacgagtccaaataccaggcagtacggcacaacggtgt
cccttaaatagttccaaatcaaaccaggataccttcagctcttctaaggtgttcccagat
ggtctaaactcattcactgcagactttccattctctacggcagagcgaaggaaccatgtt
gcggctggacctttggttacaaaccagagcagcagtaatgggtttcaggcactggaggag
gtcttgcttggagagcaacacagtcacagacttgacctgggtgatgctcctgacctttta
gcggatgagctgttgcctcagttggaggcactagaccaagacgagaactccaatcactct
tgggtaaatatagaactagagtatgaacaagaagaggatgtcaagtacaataaaggcatg
gaggatgtgccaatggtttacaatgcacagcctcctaagaacactaatggtcccagcagc
caaccgcgggtactcagcccaccagtgaagagcagctcctcttcttcctcttcatcatcc
tcgtacatatccgtgtcagagaagcgggcacagaagcgacagcagcagcagcagcagcag
caacagcagatggaggcgtccctttcggacgataaacaacagaaggccaatctaatcatc
tcagaggccatcgccaaagcacgagagaggggagagaaaaatattccacgcgtcatgagt
ccagaaagcttcccgtcttcttcgtcgcaacaccgcagtcacagggcccgttcttccaag
tccagaggcaaggataagagttccaagaaggcccggattgtgacgtcatccaagtccaaa
caaaaggctcaaattgggaaaatcattataaagcttggaaagaagaagcgaaagaagacc
gattcctctgaagagctttctgatgatgacagaccaactcgacgatcctctaaagatgat
gattcgaagcgtcgttcgaaccggaaggtcaagaggaagaagtatgaggatgatggcgag
gctcgattttccgatgaagagatgaaggtcatcgtaaaagccaagaagaccaactccagc
gctcaaaaacagccttcggtgcaactgtttgtggagaacccgactgaggaagatgctgct
gtggtagataaaatcatggcatctcgtgtggtgaaaaacgaggtttctcctggggtgatg
gtagaaactgaagagtattttgtcaagtacaaaaactactcgtatcttcactgtgagtgg
gcgacagagcagcatttagagaaagacaagaggatccagcagaaaatcaagcgcttcaag
atcaaacaggcgcagagagcacacttctttgctgatatggaggaggaaccgttcaatccc
gactatgtagaagtggaccgagttcttgaggtctcgtactgtgaggacaaggactccgga
gagccggtggtgtattacctggtgaaatggtgctcattgccatatgaggacagcacatgg
gagctgaatgaagatgtagaccagacaaagattgaagagttcaaaaagctgcaggcagcg
aaaccacacaccaacagagtggagcgtccaccggcgagtcactggaagaagcgggagcaa
tcccgagagtattgtaatggaaactgtctcagggattaccagctagagggggtcaactgg
cttctcttcaactggtataacaggcgtaactgtattctggcggatgagatgggtctggga
aagaccatccagtccatcacgtttctggatgagatctgtcgcacagggatcaaggggcct
ttcctcatcatcgcccctctctctaccatcgctaactgggagagagaattcagaacctgg
acgaaactcaatgtcatcgtgtaccatggcagtgtggtcagccgacagatgctccagcag
tatgagatgtacttcagagacgctcagggtcgtgtgataagaggtgcttaccggtttcag
gcggtcattacaacatttgagatgatattgggaggctgtccagaacttaacgcaatagac
tggcgctgtgtcatcattgatgaagcccatcggcttaaaaataagaactgcaagctactg
gagggcttcaaacttatgagtctggaacataaggttttgttgacgggcactccactacaa
aacacagtagaggaactctttagtctgctgcacttcctggagccgaaccgctttccttct
gaaagcaccttcatgcaggaattcggagacctcaagactgaggagcaggtccagaaactc
caggccatcctgaaaccgatgatgctgcgtcgtctaaaggaagacgtggagaagaagttg
gctcctaaagaggagaccatcattgaagtggagctcaccaacatccagaagaagtactac
cgcgccatcctggagaagaacttctcattcctggctaagggagctggccaagccaacgtc
ccaaacctgctcaacaccatgatggaactgcggaaatgctgcaaccatccctacctcatc
aaaggggctgaagagaagatcttagaggacttcaaggaggtgtatagccccgcagccgta
gatttccacctgcaggctatgattcagtctgcaggtaaactcgttctcattgacaagctg
cttcccaagatgaaggccggtggacacaaagtgctcatcttttctcagatggtgcgctgc
ctggacatcctggaagactacctcatccagagaagatacctctatgagcggatagacggc
cgtgtacgtgggaacctccgtcaagcagcgatagaccgtttcagtaaaccagactcggat
cgattcgtcttcctgctgtgtactcgagcaggtgggctcggtattaacctcacagctgct
gacacctgtatcatctttgactctgactggaaccctcagaacgacctgcaggctcaggct
cgctgccacaggattggtcagaataaagcagtaaaagtatatcgactaatcacacgtaac
tcatatgagcgagagatgttcgatagagccagtctaaagctgggactggataaagctgtg
cttcagagcatgagcgggcgagacaacagtctaggaggaggagggcagatgcagcagcag
ctctctaagaaggagattgaagatcttctgcggcgtggagcttatggtgccatcatggat
gaggaagatgagggggctaaattttgtgaagaagacattgaccaaatcctgcaacgcaga
accaagaccatcactattgaatctgagggtcggggctccaccttcgccaaggccagtttt
gttgcttcagggaacagaacagacatctctctggatgaccccaacttctgggacaagtgg
gctaagaaagcagagattgacatggatacagtcaatggcagaaacagtctggtgatcgac
acccctcgtgtcaggaaacagacccggccattcagtgctactaaggacgagctggccgag
ctctctgaaggggagagtagtggagatgacaaacccaaactccggcggccgcatgaccgc
ctcaacagctatggccgcacagagtgcttccgagtggagaaaaatctgttggtgtacggg
tggggccgctggaaggacatcctggctcatgggcgctttaagcgtcagctgaccgagcgt
gacgtggagtgtatatgcagagcactcctggcatactgcctcgttcattaccgtggagat
gataaaatcaagagcttcatgtgggatctgatcgctcccacagaggacggcaggaccaag
gaacttcagaaccatttgggtttgtcagctccagtgccacgaggcagaaaaggaaaaaag
atgaagactcaatctagctcatttgatatccagaaggcagagtggatacgaaaacacaac
ccagaacacatgttgtctgatgatgggtacaagaaacacctgaaacaccattgcaacaag
gtgctgttgagggttagaatgctgtactatttgaaacaagaggtgattggagtgcagtgc
caaaaagtgctggatggggcagatgccagtgaggtcgagatctgggttcctgagcctgat
cattcagagatgcctgctctgtggtgggacatgctctcagacaaatgtctgctgttagga
gtctttaagcacggttatgagaagtacaacactattcgtgcagatccagcactgtgtttc
ttagaaaaggttgggcggccagacgacaaggccatcgctgcggaacaaagaggaaatgac
tttatggatggagatgtggacgaccctgagtataagcctgctccagctttgctgaaggat
gatatggaggatgatgcttcttccccaggagacctggtcatcactgatacaggcggagaa
ggagggtctgtattagatggtggtggtgggactttgggtgctggatcagggatgtactgg
ccctcaccctccgcgctgacggctcgactgcggcgtctgatcactgcttctcagcgcttc
accaagagcaaacagatacttcagatccaccagacacagcaggccatgacccctgccccc
taccctctgccccccacgatcagcgacacactcaatcccaaaattgctgctaagattgaa
agacaacaacggtggacgcggagagaggaggcggatttctatcgtgtggtttcaacattt
ggggtagtgtttgatccagatttgggctgctttgactggaccaagtttagagccatggct
cgactgcacaagaaaacagacgagagtctacacaagtacctttgtgcctttattgccatg
tgcaggagggtctgccgcctgcctgctatagagggagatatgatggactcctctcttgct
atacaaccaatcacagaggagcgtgcctcccgtaccttatacagagtggagttgctgcgg
aagataagagaacaggtgttgcgtcacccgcagctttatgagcgtctcgcactgtgccag
ccaggacccgatcttccagtgtggtgggaaacaggatcccacgatcgggatcttctgctt
ggggcagccaaacacggagtcagccgaacagactaccatatcctccgtgacccggagctc
tgctttatggcagcacagagaaactacagccagaacaagggaactgcagcacaagtgcaa
gcccagaatcaggcgccttcactgggacagtgtcacatcccaacccccctccagcatttt
cagactaaagaggcttctgcttcaccactcccaaaccaaactgagctgaaggaagagccc
ctgtcagagggagaggaagagagtggagagcaaaatcccaagacggagacaccctctatc
agaccacccacaccttcaggagtggatgagaaagatgacatccccaaagtgggagagaac
gagagccggatggtggcggccagaacaaaaccactcacgccgaactcagtaactcgaaaa
cagaagaagctgagtaagcggagccgcagggaggccaggagggggtcgggatctgactcg
gactcggatggatcctcatccagctcttcgtcaagttcttcatcaagatcttcttcctca
tcctcatcttcgtcacggtctggaagcagttcctcgacttcgtcttcctcctgttcttca
ggctcttcgtcttcatcatcatcatcatcctcgtcttcagaagacagtgacagcgaggag
gtaccaaagaacgcgtccgcagtgcctggtgttaaaggctttgacgaagacagcgttgcc
tctctcaacactacacaagatgacatgcaggacagtcatgtgaccaacggtatctctaac
cctccccaccctttccagggaggttatatgcttgctgcctcctactggccaaaggaccgt
gtcatgataaaccggttggacagtatatgtcaggcagtgttgaaggggaaatggccaggg
gttcgtcgtgcatacgaaggcaatgcagtgacttctttctacaccaccaaactcctggac
aacacaaccccgctcacagaagacccttcagcctcccctcagggttcaaaggtgaagaag
catgttgcagacagagaaaaggagttctcagtcaaaatcaatgaccaggagggcagcctt
aaactgaccttccaaaagcaaggtttgcctctgaagcgccccctggagggagaggaggga
cctcttgcccagcagcagtacttagcccggcttcaagagttacagaacgcatctgacacc
agcctggcagactacaccaaaacacagaacaactatccacaagtactgccagagcaaatg
cgccagaatggagtaatggacggacagcctgtaataaagaagagaagagggcggcggaag
aatgtagagggcatggacctgctgttcatgaacagaaacaggcctcctctgatggcagac
cagagtcctgctggctggagtagcagtgtggccagtacatccgctccccctgggttgagc
acacctcaggggcccagcacccttgatacggaatgccgtgttcccgtcatcagtctcaaa
gatgggacacgactagccggagaagacgctccaaagcggaaagatcttgaccagtggctt
aaagagcacccaggcttcgtggcagatgtaggagcctttattcctaccgcaaacaagctg
cagtttcaagatggcagaccaaaacagaagagacatcgctgcagaaacccaaacaaaatt
gacatcaacagcctaactggagaagagcgagtacagatcatcaacaggcgaaatgctcgc
aagattggtggtgcatttgctcctccgctgaaagatttaagccggttcctgcaggagaat
ccagagtatggtgtcccaccagagtgggctgacgttgttaaacagtctggttaccttcct
gaaagtatgtttgaccgcatcctgaccggccccattgttcctgaagaagtgagccggcga
ggacgacgtcccaaaaacgctttggctaaagcaaccaccatgaccaatgccagtgccaac
gccgccctggggctcaacccactcctgaccaacggcctcctcgccgggctggacctgcct
agtctccaagctcttcagcacaacctccagagcctccagtctctccaactcaccaccggc
ctcatgggactgcctcacgaccctaccaacatggccaccatgtttccaatgatgctttcc
ggaatgaccgggctgccgaacctcctcgggatgagcggtatcctcggacaacaggacacg
gcaggtgtggctttgacgagcgacgaggacgggaaaaagaagagcggtggagaggccgcc
acacacaaagggtcggctgagactttgagtccagatggcaaagctgaaaggacagagggt
caaagctccaaagccaccacctcaacagccgccaactccaatcaaacaagtgcttctgct
tcaggccacccactggccctcaacccccttctcctctctagtatgctctacccagggatg
cttcttacgccaggccttaacctgcctgtggccaaccagccgcaagctgcaaacactcag
ccaaccccaccactgcaacctgctgcctctgaagccacggcgcagctgcccggccgctcg
gaggacaaagacagcgatgagggggaggagcccgacgaaaagaaggataccagtggtcca
gagggctcggcgaaggcggagtcatcctcctccgagtccgacagctcctccgagtcatcc
gaggattccgattccagcgacgaagactga
DBGET
integrated database retrieval system
