Carassius auratus (goldfish): 113106098
Help
Entry
113106098 CDS
T07313
Name
(RefSeq) protocadherin-7-like isoform X1
KO
K16498
protocadherin delta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113106098
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113106098
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113106098
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113106098
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113106098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
113106098
NCBI-ProteinID:
XP_026123462
Ensembl:
ENSCARG00000005594
UniProt:
A0A6P6PRN3
LinkDB
All DBs
Position
1:27045590..27078400
Genome browser
AA seq
1325 aa
AA seq
DB search
MGSRSVGAVHSARCYLVLILQLLTQLPRSNSVLRYTVAEEGPADVHIGNVASNLGLSTSG
IGTGDVTFALESGSEYFKIDNVTGELTTGSKRIDREKLPQCQMIFDENECFLNFEVSVIG
PLQSWVDLFDGRIVVTDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGID
RYELIQDSRDVGSSSRRPANGPTNGNGGDRRRGSETGTGTASRSSVFELQVADTPEGQKQ
PQLIVKGPLDREARDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPRFERAVYEAEM
AENAPPGTPVLQVRASDRDVGVNGQVEYVFGAATESVRRLLRLDEASGWLSVLHRIDREE
VSQLRFTITARDRGQPPRTDRTTVVLNVRDENDNVPIVEIRKIGRILVRDGAAMVPENVL
VDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALAPPPATDDAFERNKKKYFL
HTSALLDYEATREYSVTIVAVDSGSPSLSSNSSLLVRVVDINDHAPTFAQSLVEVHFAEN
NAPGERVVTVVASDADSGKNAEIAYSLDPSVNGAFYIDADNGDIRATGPLDREQRERYEF
RVIARDKGTPSLQGSATVVVQVTDRNDNAPKFVQEVFTFYVKENLLTNSPVGMVTVTDAD
EGENAELSLFVEHDEEEGGEEGKEGKQEVFSIENNTGTIFSSASFDRERRSAYSFRVRAV
DGGEPPRSATATVSLFVTDENDNAPSITSPANESYTLLPPASGARTVVRTVTASDGDTGS
NADLRYALVGGNPFHLFEIGSSSGVITLAEPLERRHRGLHRLVVRVNDSGVPSLCATALV
HVFINESLANATLVDAQVARSLAVPLYLDIAGDPDSERALGKQRLSVAIGVLAGAAAVIL
VILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPQPPPLQAQGSQNERGRKPRRDKRNNGT
AKSERSLYSGIMTVNGCRRGGGDEEEEDEEASSASERIAARYCAAANGDPSSPRLGSRRH
QSSPDLARHYKSSSPLPAVHLQPNSPPVEGKKHQAVQELPPTNTFTGNSTGNADAMSLSS
DQCSDYGCQTVKYSKQPLRRVTFSVVSQTPDQGCYDSGVEDSETPSSKSSSGPRLGALPL
PEDGYERTTPEGSVGEEEHVENDPRQLPDVALTGKCTRECNEFGHSDTCWMPVQPSPRRR
MDPPQLSTFASPGDTNNNTEDDSDREEDGDGATDKSSGGSEEVANGDPLGTLSRRDRNRN
MGDHNRNLLNRKMTSASYDTFSSAGFGHRPDEEDSHPPEVIPLTRTGGDYKTTSCLTLSR
REVYL
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaggagcgttggcgcagtgcactccgcgcgctgctacctcgtgcttattctg
cagctgctgactcagctcccgcgctccaattcagtgctgcgctacaccgtggcggaagag
gggccggccgacgtgcacatcgggaacgtggcttccaacctgggactgtccacctctggg
attgggaccggtgatgtcactttcgctttggaatctggctctgaatacttcaaaattgac
aacgtcactggagagcttactacaggcagcaagaggattgacagagagaagctgccgcag
tgtcagatgatatttgacgagaacgagtgctttttgaactttgaagtgtcagtcataggt
cccctgcagagttgggtggatctgtttgatggtcgtattgtagtcacagacatcaatgac
aacaccccctctttcccttcaccagtacttacactatctgttgaggagaatcgcccaatc
ggcacactctatctccttcccacagcgacagaccgtgattttggtcgcaatggcattgat
cgctatgagcttattcaggacagtagagatgtggggtcatcttcacggcgacctgcgaat
ggaccaactaatgggaatggtggtgaccgaaggagagggtcagaaacagggacaggaact
gccagcaggagcagcgtgtttgaactacaagtggccgacacacctgaaggtcagaaacag
cctcagctgatcgtgaaagggcctctggaccgtgaagcacgggattcttatgaactagtg
ctacgagttcgtgatggcggcaacccgccccgctcttcacaagctctgttacgtgtatcc
atcacagatgtcaatgacaacagtccacgttttgaaagagccgtgtatgaagcagaaatg
gcagaaaatgccccacctggcacacctgtcctgcaggtgcgtgcctcagaccgtgacgtt
ggcgtgaatgggcaggttgagtatgtgtttggagcagcgacagaatcagtgcggcgcctc
ctgaggttggatgaagcatcaggttggctgagcgttctgcatcgtatagaccgcgaggaa
gtttcacagctacgtttcaccatcacagcccgcgaccgtggccaacctcctcgtactgac
cgcactacagttgttctcaatgtcagggatgaaaatgacaatgtaccaatagtagaaatt
cgaaaaattggacgaatccttgttcgtgatggtgctgcaatggttccagagaacgtgctg
gtggacactccagtagcattagtgcaggtttcagaccgcgaccaaggagagaatggtgca
gttacctgcactgtggttggagatgtaccattcacactgaaaccggcgggtgagacggcc
ctggcacctccaccagccacagacgatgcctttgaacgaaacaaaaagaaatactttctc
cacacctcagcacttttggattatgaagctactcgagagtatagtgtgactattgtggca
gtggactccggtagcccaagcctctcgagtaatagttcccttctggtgcgtgtggtggac
ataaatgaccatgctcctacttttgcccaaagcttagtggaagtgcattttgcagagaat
aatgccccaggagaacgagtggtcactgtagtagcgtctgatgcagacagtggcaagaat
gcagagattgcttactcactggacccatctgttaatggagctttttacattgatgctgat
aatggtgatattcgtgccactggaccactagatagagagcagagggaacgctatgaattt
cgtgtaatagctcgagataaaggcacaccatctctgcagggctctgctactgtcgtagtc
caggttacggacaggaacgacaatgcccccaaatttgtccaagaagtcttcacattctat
gtcaaagagaaccttctcaccaatagccctgtcggcatggtgactgttaccgatgcagat
gaaggtgagaatgcagagctgagtcttttcgttgagcatgatgaagaggagggtggagaa
gagggcaaagagggaaagcaagaagttttctccattgaaaataacactggaaccattttt
tcctctgcatcatttgaccgtgaaagacgtagcgcatactcattccgcgtgcgtgccgtt
gatggtggagaaccgccacgatctgccactgccaccgtctccctgtttgtcactgatgaa
aatgacaatgcgccatcaatcacatcacccgctaatgaatcatacaccctcctgccaccc
gctagtggggctcggactgtagtccgcacagtcacagcctccgatggtgacacagggtct
aatgccgatctccgctatgctctggtaggcggaaacccttttcatctgtttgagattggc
tctagtagtggggtcataaccttggcagagcccctagagagaagacacaggggtctgcac
cgattggtggtccgggtcaatgacagtggcgtgccttccctttgtgccacggcactggtg
catgtcttcatcaatgagagcttggccaatgctacgctggtggatgcacaggtggcccgc
agccttgcagtccccctctatttggatattgcaggtgacccagacagtgagagagctttg
ggtaaacaacggctgagcgttgccatcggtgtccttgctggtgctgccgcagttattctg
gtgatccttctggttgtgacagctcgacagtgtggggctcagggtaagaacggctatgag
gctgggaagaaggagccagaagaggactttttcagtccacagcctccccctctacaagcc
cagggctcccaaaatgagcgtgggcgcaaaccacgcagagacaagcgtaataacggtact
gccaaatctgagcgttctttatacagtggaattatgacggtgaatggttgcagacgtggg
ggaggcgatgaagaagaggaggatgaagaggccagcagtgccagcgagaggattgcagca
cgttattgtgcagcagctaatggagaccccagcagtccaagacttggctcgagacgtcat
caatcaagcccagatctggctcggcactacaagtccagctcacctttgcctgcagtgcac
cttcagcccaactcaccacccgtggaaggcaagaagcaccaggctgtgcaggaactgccc
cccactaacaccttcactggcaacagcaccggtaatgcagacgccatgtcactcagctca
gaccaatgctccgattacggctgccaaacagtcaagtacagcaaacagcccctcagaaga
gtgacattttcggtggtgagtcagactcctgatcaaggctgctatgatagtggagtggag
gactctgagacccccagcagcaagagctcctctggacccagactgggagctttaccgctg
cctgaagacggatatgaaaggacgacaccagaagggagcgtaggcgaggaggagcatgtt
gaaaatgaccccaggcagctccctgatgtggctctgacaggaaagtgcacacgagagtgt
aatgagtttggtcactctgacacctgctggatgcccgtgcaaccatcgccaaggagacgc
atggacccaccccaactctccaccttcgcctcgcccggtgataccaacaacaacacggaa
gacgacagcgaccgggaggaagacggagacggggctacggataagagcagcggaggaagc
gaggaggttgcaaacggagatccgctcggaacgctcagccgccgggaccggaacaggaac
atgggcgatcacaaccgtaatctcctgaaccggaaaatgacctcggcatcctacgacaca
ttcagcagtgccggctttggccaccgtccggatgaagaggactcacacccacccgaggtc
attccgcttacgaggacggggggcgactataagaccacctcgtgcctcactctgtctcgt
agggaagtgtacctgtga
DBGET
integrated database retrieval system