KEGG   Carassius auratus (goldfish): 113106098
Entry
113106098         CDS       T07313                                 
Name
(RefSeq) protocadherin-7-like isoform X1
  KO
K16498  protocadherin delta 1
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    113106098
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:caua01009]
    113106098
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:caua04515]
    113106098
Protein phosphatases and associated proteins [BR:caua01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113106098
Cell adhesion molecules [BR:caua04515]
 Cadherins
  Protocadherins
   113106098
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 113106098
NCBI-ProteinID: XP_026123462
Ensembl: ENSCARG00000005594
UniProt: A0A6P6PRN3
LinkDB
Position
1:27045590..27078400
AA seq 1325 aa
MGSRSVGAVHSARCYLVLILQLLTQLPRSNSVLRYTVAEEGPADVHIGNVASNLGLSTSG
IGTGDVTFALESGSEYFKIDNVTGELTTGSKRIDREKLPQCQMIFDENECFLNFEVSVIG
PLQSWVDLFDGRIVVTDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGID
RYELIQDSRDVGSSSRRPANGPTNGNGGDRRRGSETGTGTASRSSVFELQVADTPEGQKQ
PQLIVKGPLDREARDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPRFERAVYEAEM
AENAPPGTPVLQVRASDRDVGVNGQVEYVFGAATESVRRLLRLDEASGWLSVLHRIDREE
VSQLRFTITARDRGQPPRTDRTTVVLNVRDENDNVPIVEIRKIGRILVRDGAAMVPENVL
VDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALAPPPATDDAFERNKKKYFL
HTSALLDYEATREYSVTIVAVDSGSPSLSSNSSLLVRVVDINDHAPTFAQSLVEVHFAEN
NAPGERVVTVVASDADSGKNAEIAYSLDPSVNGAFYIDADNGDIRATGPLDREQRERYEF
RVIARDKGTPSLQGSATVVVQVTDRNDNAPKFVQEVFTFYVKENLLTNSPVGMVTVTDAD
EGENAELSLFVEHDEEEGGEEGKEGKQEVFSIENNTGTIFSSASFDRERRSAYSFRVRAV
DGGEPPRSATATVSLFVTDENDNAPSITSPANESYTLLPPASGARTVVRTVTASDGDTGS
NADLRYALVGGNPFHLFEIGSSSGVITLAEPLERRHRGLHRLVVRVNDSGVPSLCATALV
HVFINESLANATLVDAQVARSLAVPLYLDIAGDPDSERALGKQRLSVAIGVLAGAAAVIL
VILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPQPPPLQAQGSQNERGRKPRRDKRNNGT
AKSERSLYSGIMTVNGCRRGGGDEEEEDEEASSASERIAARYCAAANGDPSSPRLGSRRH
QSSPDLARHYKSSSPLPAVHLQPNSPPVEGKKHQAVQELPPTNTFTGNSTGNADAMSLSS
DQCSDYGCQTVKYSKQPLRRVTFSVVSQTPDQGCYDSGVEDSETPSSKSSSGPRLGALPL
PEDGYERTTPEGSVGEEEHVENDPRQLPDVALTGKCTRECNEFGHSDTCWMPVQPSPRRR
MDPPQLSTFASPGDTNNNTEDDSDREEDGDGATDKSSGGSEEVANGDPLGTLSRRDRNRN
MGDHNRNLLNRKMTSASYDTFSSAGFGHRPDEEDSHPPEVIPLTRTGGDYKTTSCLTLSR
REVYL
NT seq 3978 nt   +upstreamnt  +downstreamnt
atggggagcaggagcgttggcgcagtgcactccgcgcgctgctacctcgtgcttattctg
cagctgctgactcagctcccgcgctccaattcagtgctgcgctacaccgtggcggaagag
gggccggccgacgtgcacatcgggaacgtggcttccaacctgggactgtccacctctggg
attgggaccggtgatgtcactttcgctttggaatctggctctgaatacttcaaaattgac
aacgtcactggagagcttactacaggcagcaagaggattgacagagagaagctgccgcag
tgtcagatgatatttgacgagaacgagtgctttttgaactttgaagtgtcagtcataggt
cccctgcagagttgggtggatctgtttgatggtcgtattgtagtcacagacatcaatgac
aacaccccctctttcccttcaccagtacttacactatctgttgaggagaatcgcccaatc
ggcacactctatctccttcccacagcgacagaccgtgattttggtcgcaatggcattgat
cgctatgagcttattcaggacagtagagatgtggggtcatcttcacggcgacctgcgaat
ggaccaactaatgggaatggtggtgaccgaaggagagggtcagaaacagggacaggaact
gccagcaggagcagcgtgtttgaactacaagtggccgacacacctgaaggtcagaaacag
cctcagctgatcgtgaaagggcctctggaccgtgaagcacgggattcttatgaactagtg
ctacgagttcgtgatggcggcaacccgccccgctcttcacaagctctgttacgtgtatcc
atcacagatgtcaatgacaacagtccacgttttgaaagagccgtgtatgaagcagaaatg
gcagaaaatgccccacctggcacacctgtcctgcaggtgcgtgcctcagaccgtgacgtt
ggcgtgaatgggcaggttgagtatgtgtttggagcagcgacagaatcagtgcggcgcctc
ctgaggttggatgaagcatcaggttggctgagcgttctgcatcgtatagaccgcgaggaa
gtttcacagctacgtttcaccatcacagcccgcgaccgtggccaacctcctcgtactgac
cgcactacagttgttctcaatgtcagggatgaaaatgacaatgtaccaatagtagaaatt
cgaaaaattggacgaatccttgttcgtgatggtgctgcaatggttccagagaacgtgctg
gtggacactccagtagcattagtgcaggtttcagaccgcgaccaaggagagaatggtgca
gttacctgcactgtggttggagatgtaccattcacactgaaaccggcgggtgagacggcc
ctggcacctccaccagccacagacgatgcctttgaacgaaacaaaaagaaatactttctc
cacacctcagcacttttggattatgaagctactcgagagtatagtgtgactattgtggca
gtggactccggtagcccaagcctctcgagtaatagttcccttctggtgcgtgtggtggac
ataaatgaccatgctcctacttttgcccaaagcttagtggaagtgcattttgcagagaat
aatgccccaggagaacgagtggtcactgtagtagcgtctgatgcagacagtggcaagaat
gcagagattgcttactcactggacccatctgttaatggagctttttacattgatgctgat
aatggtgatattcgtgccactggaccactagatagagagcagagggaacgctatgaattt
cgtgtaatagctcgagataaaggcacaccatctctgcagggctctgctactgtcgtagtc
caggttacggacaggaacgacaatgcccccaaatttgtccaagaagtcttcacattctat
gtcaaagagaaccttctcaccaatagccctgtcggcatggtgactgttaccgatgcagat
gaaggtgagaatgcagagctgagtcttttcgttgagcatgatgaagaggagggtggagaa
gagggcaaagagggaaagcaagaagttttctccattgaaaataacactggaaccattttt
tcctctgcatcatttgaccgtgaaagacgtagcgcatactcattccgcgtgcgtgccgtt
gatggtggagaaccgccacgatctgccactgccaccgtctccctgtttgtcactgatgaa
aatgacaatgcgccatcaatcacatcacccgctaatgaatcatacaccctcctgccaccc
gctagtggggctcggactgtagtccgcacagtcacagcctccgatggtgacacagggtct
aatgccgatctccgctatgctctggtaggcggaaacccttttcatctgtttgagattggc
tctagtagtggggtcataaccttggcagagcccctagagagaagacacaggggtctgcac
cgattggtggtccgggtcaatgacagtggcgtgccttccctttgtgccacggcactggtg
catgtcttcatcaatgagagcttggccaatgctacgctggtggatgcacaggtggcccgc
agccttgcagtccccctctatttggatattgcaggtgacccagacagtgagagagctttg
ggtaaacaacggctgagcgttgccatcggtgtccttgctggtgctgccgcagttattctg
gtgatccttctggttgtgacagctcgacagtgtggggctcagggtaagaacggctatgag
gctgggaagaaggagccagaagaggactttttcagtccacagcctccccctctacaagcc
cagggctcccaaaatgagcgtgggcgcaaaccacgcagagacaagcgtaataacggtact
gccaaatctgagcgttctttatacagtggaattatgacggtgaatggttgcagacgtggg
ggaggcgatgaagaagaggaggatgaagaggccagcagtgccagcgagaggattgcagca
cgttattgtgcagcagctaatggagaccccagcagtccaagacttggctcgagacgtcat
caatcaagcccagatctggctcggcactacaagtccagctcacctttgcctgcagtgcac
cttcagcccaactcaccacccgtggaaggcaagaagcaccaggctgtgcaggaactgccc
cccactaacaccttcactggcaacagcaccggtaatgcagacgccatgtcactcagctca
gaccaatgctccgattacggctgccaaacagtcaagtacagcaaacagcccctcagaaga
gtgacattttcggtggtgagtcagactcctgatcaaggctgctatgatagtggagtggag
gactctgagacccccagcagcaagagctcctctggacccagactgggagctttaccgctg
cctgaagacggatatgaaaggacgacaccagaagggagcgtaggcgaggaggagcatgtt
gaaaatgaccccaggcagctccctgatgtggctctgacaggaaagtgcacacgagagtgt
aatgagtttggtcactctgacacctgctggatgcccgtgcaaccatcgccaaggagacgc
atggacccaccccaactctccaccttcgcctcgcccggtgataccaacaacaacacggaa
gacgacagcgaccgggaggaagacggagacggggctacggataagagcagcggaggaagc
gaggaggttgcaaacggagatccgctcggaacgctcagccgccgggaccggaacaggaac
atgggcgatcacaaccgtaatctcctgaaccggaaaatgacctcggcatcctacgacaca
ttcagcagtgccggctttggccaccgtccggatgaagaggactcacacccacccgaggtc
attccgcttacgaggacggggggcgactataagaccacctcgtgcctcactctgtctcgt
agggaagtgtacctgtga

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