Carassius auratus (goldfish): 113106149
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Entry
113106149 CDS
T07313
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113106149 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caua01002
]
113106149 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113106149 (shh)
Peptidases and inhibitors [BR:
caua01002
]
Cysteine peptidases
Family C46: hedgehog family
113106149 (shh)
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Morphogens
113106149 (shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
Vint
Hom_end_hint
DUF7764
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
113106149
NCBI-ProteinID:
XP_026123570
Ensembl:
ENSCARG00000001367
UniProt:
A0A6P6PTR6
LinkDB
All DBs
Position
7:18036290..18045598
Genome browser
AA seq
418 aa
AA seq
DB search
MRFKTRVLLVSLLSLSLVVSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSALVSLSDGGQKAVKDLKPGDKVLAADGEGKLVYSDFIM
FTDRDSATRRVFYVIETKEPVEKITLTAAHLLFVLDNSTDDLHSMTAAFASSVRAGQKVM
VVDDSGHLKSVIVERIYTEEHQGSFAPVTAHGTIVVDRILASCYAVIEDHSLAHLAFAPV
RLHHSVSSALFPQNFISQSNATLQQEGVHWYSKLLYHMGTWLLDSHVLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttaagacgagagtgctgctggtgtctcttctcagcctgtccttggtggtgtcc
ggactggcctgcggtcctggcagaggctacggcagaagaagacatccgaagaagctgaca
cctctcgcctacaagcagttcatacctaatgtcgcggagaagaccttaggggccagcggc
agatacgagggcaagatcacgcgcaattcggagagatttaaagaacttactccaaattac
aatcccgatattatctttaaggatgaggagaacactggcgcggacagactcatgacacag
agatgcaaagacaagctgaactcactggccatctctgtaatgaaccagtggccaggggtt
aagctgcgtgtgacagagggctgggatgaggacggacaccattttgaagaatcactccac
tacgagggaagagctgttgatatcaccacctctgatcgagacaagagcaaatacgggact
ctctctcggttagctgtggaagctggatttgactgggtctattatgaatccaaagcccac
atccattgctccgttaaagcagaaaattcggttgcggcgaaatctggaggctgcttcccc
ggttcggctctggtctcgctcagtgacggaggacagaaggccgtgaaggacctgaagcca
ggggacaaggtgctggcggcggacggcgaagggaagctcgtgtacagcgacttcatcatg
ttcacagaccgagactccgcgacgcgacgcgtgttttacgtgatagaaacgaaagaaccc
gttgaaaagatcaccctcaccgctgctcacctcctttttgtcctcgacaactcaacggat
gatctgcactccatgaccgccgcgtttgccagcagtgtcagagccggacaaaaggtgatg
gttgttgatgatagcggtcaccttaaatctgtcatcgtggagcggatatacaccgaggag
caccagggctcgttcgcaccagtgactgcgcatggaaccattgtggtcgacagaatactg
gcgtcctgttacgccgtaatagaggaccacagtctcgcgcatttggccttcgcgcccgtc
aggctccatcatagcgtgtcatcggccctgttcccccaaaacttcatcagtcagtccaat
gcgactttacaacaggagggagtccactggtactccaagctcctgtatcacatggggacg
tggcttttggacagccacgtgcttcatcctttggggatgtcagtaaactcaagctga
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integrated database retrieval system