Carassius auratus (goldfish): 113106175
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Entry
113106175 CDS
T07313
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113106175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113106175
Membrane trafficking [BR:
caua04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
113106175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
CENP-O
FerA
Motif
Other DBs
NCBI-GeneID:
113106175
NCBI-ProteinID:
XP_026123628
Ensembl:
ENSCARG00000006656
UniProt:
A0A6P6PRB9
LinkDB
All DBs
Position
7:complement(18586408..18613430)
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AA seq
839 aa
AA seq
DB search
MNSSALRACCAARHEAEQQRRSHVTRHIHGGGHPVFPLKHLIIMPTTQQSPQDEQEKLLD
EAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELHYL
EVYLTDEFAKGRKVSDLYELVQYAGNIIPRLYLLITVGVVYVRSFPQSRKDILKDLVEMC
RGVQHPLRGLFLRNYLLQCTRNILPDDGEQAEEEMTGDINDSIDFVLLNFAEMNKLWVRM
QHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKYKQVVLSGILEQVVNCRDSL
AQEYLMECIIQVIPDEFHLQTLNPFLRSCADLHQNVNVKNIIIALIDRLALFAHREDGPG
IPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPERVDYVDKVLESTV
EIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQLKHFPPLFEYFDYESRKSMS
CYVLSNILDYNTTIVAQDQVDAILTLVSTLIQDQPDQPAEDPDPEDFTEEQSLVGRFIHL
LLSDDPDQQYLILNTARKHFGAGGNQRIRHTLPPLVFAAYQLAFRYKENSSSDDKWEKKC
QKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETIAYEFMSQAFSLYEDE
ISDSKAQLAAITLIIGTFERTRCFSEENHEPLRTQCALAASKLLKKPDQCRAVSICAHLF
WSGRNTDKSGEEIRDGRRVMECLKKALKIANQCMDPSLQVQLFIEILNRYICFYERENDA
VTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLRLQRESPESEGPAYEGLVL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaatagttcagctctcagggcttgttgtgctgctcggcatgaggcggagcagcagcgg
cgcagtcacgtgacacgacacattcacggggggggtcatccagtgtttcctctaaaacac
ctaataataatgcctaccacacagcagtcacctcaggatgagcaggagaagctgttggat
gaagctgtgcaggcagtcaaggttcagtcatttcagatgaaacgctgtctggacaagaac
aagttgatggatgcactgaaacatgcttcaaatatgttgggggagttgaggacttctatg
ctttctcccaagagctactacgaactctacatggccatctctgatgagctgcattacctg
gaggtctatttgacagatgagttcgccaaaggccgcaaggtctctgacctctatgagctt
gttcagtatgcaggcaacatcatccctagactgtatctgttgataactgtcggagtggtg
tacgttcgctctttcccccaatcccgcaaagacatcctaaaggacctggtggaaatgtgc
cgtggtgtgcagcatccactccggggcttgttcctcaggaactaccttctgcagtgtacg
cgcaacatcctgcctgatgatggagagcaggccgaggaagagatgactggggacattaat
gactccattgactttgtgctgctgaattttgccgagatgaataaactgtgggtgcgcatg
cagcatcagggacacagtagggaccgagaaaagagagagaaggagagacaagagctgcgc
atcctcgtagggaccaatctggtccgactgagccagctggaaggcgtcaatgtggaaaag
tacaaacaggtcgtgttgtctgggatcttggagcaggtggtgaactgtagagactctcta
gcacaggaatacctcatggagtgcatcatacaggtcattccggatgagtttcacctgcag
acgctgaacccgttccttcgctcatgtgccgatctgcatcaaaacgtgaacgtcaagaac
atcatcattgctcttattgacagattggccttgtttgctcacagagaagatggccctgga
atccctgctgaaatcaagctattcgatattttctcacagcaagtggcaacagtcatacag
tctcgtcaggacatgccatctgaagatgttgtttcacttcaagtgtctctcatcaatctg
gccatgaagtgctatcctgagcgtgtggactatgtggataaagtgttggaaagtactgtg
gagattttcaacaaactcaacctggagcacattgccaccagcagcgcagtgtctaaggag
ctaaccaggctgctgaagatccctgtggacacgtacaataacatcctcaccgtgcttcag
ctcaagcattttccaccactctttgagtacttcgattatgagtcacgcaaaagcatgagt
tgctacgtgctgagcaacattctggactacaacaccaccatagtggcccaagatcaggtt
gatgcaatcctgaccctggtgtctacgctgatccaggaccagccagatcagcctgctgag
gaccctgaccctgaggactttacagaggaacagagcctagtgggccgctttattcatctg
ctgctttcagatgaccctgaccagcagtatttgattttaaacactgccaggaaacacttt
ggcgctggggggaaccagagaattcgacacacacttcccccgctggtgttcgctgcttat
caactggccttccgttacaaagagaactcctcctcggatgataaatgggaaaagaaatgt
cagaagattttctcattcgctcatcagaccatcagtgctctgatcaaagctgagctggcc
gagttacccctgaggctcttcctccagggggctctggcggctggagagatcggctttgag
aaccatgaaaccattgcctacgagttcatgtctcaggccttctccctgtatgaagatgag
atcagcgactcgaaggctcagctggctgcaataacgctgatcattggcacatttgagcgc
acgcggtgcttcagcgaagagaaccacgagcccctgcgcacccagtgtgccctggctgcc
tccaaactgctgaagaaacccgaccagtgccgtgcggtcagcatttgtgcccaccttttc
tggtcaggacgcaacactgacaagagtggagaagagatccgtgatggacggagggtgatg
gagtgcttgaagaaggctctgaagatcgctaaccagtgcatggacccgtccttgcaagtt
cagctcttcatcgagatcctcaacagatacatctgcttctatgagcgagagaatgacgcg
gtgacggtccaagtcctgaatcagctgatccagaagatccgcgaggatctcccgaacctg
gaggccagcgaggagacggagcagattaacaaacacttccacaacacactggagcacctg
cgtctgcagagagagtcgcccgagtctgagggacctgcttacgaggggctggtgctgtag
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