Carassius auratus (goldfish): 113106231
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Entry
113106231 CDS
T07313
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
caua00535
]
113106231
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113106231
04091 Lectins [BR:
caua04091
]
113106231
Proteoglycans [BR:
caua00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
113106231
Glycosaminoglycan binding proteins [BR:
caua00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
113106231
Lectins [BR:
caua04091
]
C-Type lectins
Lecticans
113106231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
EGF_TEN
V-set
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
113106231
NCBI-ProteinID:
XP_026123715
Ensembl:
ENSCARG00000012673
UniProt:
A0A6P6PU88
LinkDB
All DBs
Position
7:22418763..22434133
Genome browser
AA seq
1596 aa
AA seq
DB search
MLSLLSLSMCFWVCSATASFDYFNTEPESTLGVSIPNEHPLRPLMGDTLILPCYFLDNTV
NDPGAPTIAPLSHRIKWSLVTKEKTTNILTASEGVVSIDKRYLDRITMFAYPMTPTDASI
KITELHTNDSGVYRCEVMHGIEDSYAVVDVQVQGIVFHYRAITTRYTLTFEKAKAACIQN
SAVIATPEQLQAAYDEGFHQCDAGWLADQTVRYPIHDPREACYGDKYEFPGVRTYGVRDV
NETYDVYCFAEKMTGKVFHTTSPNKFTFEEAEAECARLDAKLATTGQLYLAWKGGMDVCN
AGWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPLPDSRYDAFCYSGMAEEVSG
LLPFDIEMTTEASNGVPGVNTITESPQVFLKPTSTAGELQGEVVTYKPSVTTSVEFPYTA
LNISQLPLLPPPSSVDTLDGVTDGTDLASDLSRLNETEGIMSATGVVFHYRATSGRYAFD
FVEAQLACQSIGAVIASPQQLQAAYESGYHQCDAGWLLDQTVRYPIVSPREKCSGDLEHV
PGVRSYGLRSSDERYDVYCYVDKLRGEVFHASSFEGFTYGEAVAYCQGKNASLASTGDLY
AAWKQGFDKCRAGWLLDQSIRYSINNPRQQCGGGEAGIHTVYKFPNQTGSPDLHSKFDAY
CIKVDLDLSLNESETNMTVTEDKIVSVTSLPALLKPEGVAPTTLPAESSGSGTSGLNGTD
DQLSSGSGDQPSGSHVSSGDSSGASSTDDLFSSGSGDQPSGSPISSGDSSGASGIDSLSG
SGSGDQLSGSFLSSGDSSGISGPDDLLSSGSGDQPSGLFVSSGDSSGASGNDNLLDSGSG
DQLSGSFVSSGDFSGASGNDSLLESGSGDQPSGSFVSSGDSSGASGSGDLPSGSLGSSGS
GSGLDILVTFTESDSILSGVGSVSGRPEEAGEAGTEILTFPFGHGSGLFGLDTSGSGSGS
GSGFSSEESGSTSDFSSSSGESDESGDLSGNFSGSGSSEESSGISGFPSGIFPSGGSIGI
SLIDGSGDIMVDSPWVKVFTAPHLTEQELSGSHVDFSGSGHISGSGMSGDVSGMNGDVSG
MNGDVSGMSGDISGMSGDISEVSGVHSGSESGLEFSGLTFLGSGFIDLTEQPREQEASGL
LVFGSGERSGFTSGGYAIESGERSGESASGDIIFFSNNGQVEMSNKPFQVMELGRGEVEY
SGTNRLSSGSGDDQSAFASGQEHEWILDTEDTPTVNSSDAVDVLSAQGPSSLYSDAAGPP
LPPLSEPEGITSKLDTVTSAALSSTTEPTSLQSPSVTEGLTINASLNPCEPNPCGAGVCS
VKDGVGICHCPPGQHGEECQFEVDVCHSNPCANGATCVEVEDTFKCLCLPSYEGDHCEID
VHSCEEGWTKFQGNCYLHFSERKTWLDAEQHCRNFNAHLVSIITPEEQTFISSYAQDYQW
IGLNDKMVENDFRWSDGTPLQYENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPCNYHL
PFTCKTGPVTCDQPPKVENARIFGNKKDRYQVNSIIRYQCSDNFTQRHKPVIRCMTDGQW
EKPRVQCIAKVKSGLLKESSVHHSHKSNTTTLEKHL
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttgctttcgctgagtatgtgtttctgggtctgctcggccacagcgtctttt
gattactttaacactgagcctgaaagtacactgggagtcagcatacccaatgagcatcct
ctccggcctttgatgggtgacacattaattctgccctgctacttcttggacaacacggtc
aatgaccctggtgcgcccaccattgcccctttgtctcaccggatcaaatggagtctggtc
accaaagaaaagaccacaaacattttaacggcatctgaaggagtggtgagcattgacaaa
aggtatctggacaggatcaccatgtttgcataccccatgacgcccacagacgcctccatt
aagatcactgagctccataccaatgactcgggagtgtaccgctgtgaggtcatgcatggg
atagaggacagctatgctgttgttgacgttcaagttcaaggaattgttttccactatcgt
gccatcaccacacgatatacccttacatttgagaaggccaaggcagcctgtattcaaaac
agtgcagtgattgctactccggagcagctccaagcagcttatgatgagggattccatcag
tgcgatgcgggctggcttgcagatcagaccgtcaggtaccctattcatgatcctcgcgag
gcttgttacggagacaagtacgagtttccaggagtgaggacgtatggagtaagagacgtg
aatgagacgtatgacgtgtactgctttgctgagaaaatgacagggaaagtgttccacact
acttctcctaacaaattcacttttgaggaggcagaagctgagtgtgcaaggttggatgcc
aagttggccaccacaggacagctgtacctggcatggaagggtggcatggatgtttgtaat
gcaggctggctggcagaccggagcgtccgctaccccatcaacatcgcccgaccgcagtgt
gggggtggcctgctgggagtgcgtaccgtctatctgtttcccaatcagaccggctaccct
ctcccagactcccgctatgatgcattttgctactctggtatggctgaggaagtttctggc
ctattgccattcgatatagagatgaccacggaagccagcaatggtgtaccgggtgtgaac
acaatcacagaaagtccccaggtctttttaaagcccacctccacagcaggtgaactgcag
ggagaagttgtaacatacaagccatcagtgactactagtgttgagtttccatatactgca
ctaaatatttcccagctgccccttttaccaccccccagctctgtggacactttagatggg
gtcactgatgggactgatcttgcctctgatttatcccgtttgaatgaaaccgaaggcatc
atgtccgccacaggggtggtcttccattatcgagcaacctctggtcgttatgcttttgac
tttgtcgaggctcaactggcatgtcagagcatcggtgcagtcattgccagtccccagcaa
ctgcaggcagcatatgagtctggttaccatcaatgtgacgctggctggctgttagatcag
actgtcaggtatcccattgtgtctccacgtgagaaatgctctggtgatttggagcatgtt
cctggtgtgaggtcttatggactgcgttcttctgatgaacgctatgatgtgtactgctat
gtggacaagctacggggggaagttttccatgcaagttcattcgagggattcacttatggt
gaggcagtggcttactgccagggcaagaatgcctccctggcctccacaggagacctgtat
gccgcttggaagcagggctttgataagtgccgtgctggttggcttcttgaccaaagtata
cgttactccatcaataacccgcggcagcagtgtggtggaggggaggctggaattcacaca
gtttacaagtttcccaaccagactggctctcctgacctgcactccaaatttgatgcatac
tgcatcaaggtggatctggatctgtctctgaatgaaagtgaaacaaatatgacggtgaca
gaggacaagatagtgagcgtgacatccctccctgctcttctcaaacctgaaggagttgct
cccactactctccctgcggaatcctctggatctggcacatctgggctcaatggcactgat
gatcagttgagcagtgggagcggggatcagccaagtgggtcacatgtttcaagtggagac
tcttctggggctagtagcactgatgatctgtttagcagtggaagcggggatcagccaagt
gggtcacctatttcaagtggggactcttctggggccagcggaattgacagtctgtcgggc
agtggaagcggggaccaactgagtgggtcatttttgtcaagtggagactcttcaggaatc
agtggccctgatgatctgttgagcagtggaagcggggatcagccgagtgggttatttgtt
tcaagtggagactcttctggggccagtggcaatgacaatctgttagacagtgggagcgga
gatcagctaagtggttcatttgtttcaagtggagacttttctggggccagtggcaatgac
agtctgttggaaagtgggagcggggatcagccgagtgggtcatttgtgtcaagtggagac
tcctctggggcaagtgggagtggggatctgccaagcgggtctttaggttcttcaggatct
ggcagtggcttagatatcctagtgacctttacagaaagtgactccattttatcaggagtt
ggatcagtttcaggaagacctgaggaggctggggaggcaggcacagagatcctgaccttt
ccctttggccatggctcagggctctttggattggacacctctgggtcaggatcaggaagt
gggtcagggtttagctctgaagagagtggatctacctcagacttttctagcagctcagga
gaaagcgacgagagtggagacctttctggcaacttctcaggatcaggttctagcgaggag
tcctcaggaattagtggtttcccatcaggaatttttccctctggaggatcaattggcatt
tcattaatcgatggcagtggtgacatcatggtggacagcccttgggtaaaggtgttcact
gctccacatttaaccgaacaagaactgagtggaagccatgtggatttcagcggatcagga
catatctcagggtctgggatgagtggtgatgtctctgggatgaacggtgatgtctctggg
atgaacggtgatgtctctgggatgagcggtgacatctctgggatgagcggtgatatatct
gaagttagcggtgtccacagtggctctgagagtggtttagagttttctggtctgacattt
ttgggatcgggctttattgatctcacagaacaacctcgtgagcaggaagcttctggactt
ttggtgtttgggtctggtgagagaagtggatttacatctggaggctatgccattgaatca
ggggaaagatcaggagaatcagctagcggtgatatcatcttcttctccaataatggtcag
gtggaaatgtccaacaagcccttccaagtcatggagctaggaaggggggaggtggagtac
agtggcaccaacaggttgtcttcagggagtggagacgaccaaagtgcctttgctagtgga
caagaacatgaatggatcctagatactgaagatacgccaacagtgaactccagtgatgct
gtagatgtactatctgctcaagggccatctagcttgtacagtgatgctgcaggacctcca
ttgccaccattatcggaaccagagggaatcacaagtaaacttgacactgttacttctgca
gctttgtcttctaccacagaacctacttctttacagagcccttctgtcacggaaggactt
actattaatgcttctcttaacccatgtgaaccaaacccttgtggagctggggtgtgttcg
gtgaaggatggggtgggcatctgtcactgcccacctggacagcatggagaagagtgccag
tttgaggttgatgtttgccattcaaacccttgcgccaatggagccacctgtgtggaggta
gaggacactttcaaatgcttatgtctgcccagctacgaaggagaccactgtgagattgat
gtgcacagctgtgaggagggctggactaagtttcagggcaactgttacttgcatttttcg
gagagaaagacctggctggacgctgagcagcactgtcgaaactttaacgctcacctggtg
agcatcatcactccagaggagcaaaccttcatcagctcatacgcacaagactatcagtgg
attggactgaacgataaaatggtggaaaatgacttccgctggtcagatgggactccgctg
caatatgagaactggaggcctaaccagcctgacaattattttaactctggtgaagactgt
gttgtaatgatctggcatgaaaatggccaatggaatgacgtgccctgcaactatcactta
cctttcacatgcaaaacaggcccagtgacatgtgaccagcctcctaaagtggagaatgcc
aggatatttggcaacaagaaagatcgttatcaggtgaattctataattagataccagtgc
agtgacaacttcacacagcgccacaaacctgtgatccgctgcatgacagatggacagtgg
gagaagccgcgagtgcaatgcatagccaaggtcaaatctggactgctaaaggaatcttct
gttcatcactctcataaatctaatacaactacattggagaaacatctctaa
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