Carassius auratus (goldfish): 113106281
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Entry
113106281 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113106281
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113106281
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113106281
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113106281
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113106281
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
Motif
Other DBs
NCBI-GeneID:
113106281
NCBI-ProteinID:
XP_026123813
UniProt:
A0A6P6PRT7
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All DBs
Position
7:complement(24337593..24451863)
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AA seq
1242 aa
AA seq
DB search
MRTTGIVDYLSYCFLILQLLSQPAAKQVLRYRLAEEGPADVRVGNVAADLGITAGMDVTF
TLESGSEYFKIDNMTGDLSTNERRIDREKLPQCQMIFDENECFIDFEVSVIGPAQSWVDL
FEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDN
GESSVRRIGTSGTGSVDAHMGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDRE
QRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNTPRFEKSVYEADLPENSSPGAPILQ
LKAGDTDVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREDVSQLRFTVMARD
RGQPPKTDKATVIINIKDENDNVPNIDIRKIGRIFLKDGVANVAEDVIVDTPIALVQVSD
RDKGPNGIVTCTVVGDVPFQLKPASEVEGEMNKKKYFLHTSAPLDFEAVQEYNVVIVAVD
SGSPSLSSNNSLIVKVGDMNDNPPVFTKSTVEVSFPENNAPGERVVTVVALDADSGKNAE
ISYSLDSSVNGIFSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVVVLV
ADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGPNADMSLYIEQQEDIFSIDN
NTGTIFSNMAFDREQKNTYSFRVKAVDGGDPPRSATATVSLSVMDVNDNPPTVTFPMNSS
YTLLPPSSNIRTVVRTVSAADTDTGINANLSYRIVGGNPFKLFEIDAWTGVILLVGKLEQ
KHFGLHRLVVQVNDSGVPSQSTTTLVHIYVNETLSNSTIVEAQVAKSLGTPLNADIAGDP
NYDLGKQRLSIAIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHD
KGKKPKKDKNXEKSKQLLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGS
PDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISIGSDHCSEYSS
QTINKYNKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLP
EDAYERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDACWMPVRTSPERRP
KATPPKLSTFMTSPGGSVAEQPGSQETLAVANGDPSHLLGDRNRNLLNKKMASSSSSYDT
FSSAGFSASEETSRPTEEIPLAPTGEYKPTQCGTLTRREVYL
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaggactacaggcattgtggactatttaagctactgctttcttattctgcagctgctg
agtcagcccgcagccaagcaagtgctccggtaccgcctggctgaggagggtcctgccgat
gtccgtgtgggcaatgtagccgcggaccttggcatcacggctggcatggatgtgactttc
accttagaatccggctccgagtacttcaaaatcgataacatgaccggagatctgagcacg
aacgagcggcggatagaccgcgaaaagctgccgcagtgtcaaatgatttttgatgagaac
gaatgttttatagatttcgaagtgtccgtgataggacccgcgcagagctgggttgatctc
ttcgaggggaaagtgattattttagacataaacgacaacacgccgtctttcccctcacct
gttctgacgctctccgttgaggagaacagacccattggcacactttatctcttgcccacg
gccaccgacagagatttcggtcggaatggaattgagcgatacgagttgattcaggacaac
ggcgagagctctgtcaggaggatcggcacttccggcaccggcagtgttgacgctcacatg
ggcaagcggaggtttgacgagggggcgagccgtagcagcgtctttgaacttcaagttgct
gacacaacagacggcgagaagcagccgcagctaattatcaaaggagcgctggacagagag
cagcgcgactcttatgagctgactctgcgagttagagatgggggcgaccccccacgctcc
tctcaagccatccttagggtaatgatcactgatgtaaatgataacaccccacgctttgaa
aagagcgtctatgaggcagacctgcctgaaaacagctccccaggtgcccccattctccag
ctgaaagcgggcgacaccgatgttggtgtgaatggacagattgaatatgttttcggagca
gccacagagtcggtgcgacgactgctgcgtctcgacgagagcactggctggctcagtgtt
ttgcacagaattgaccgcgaagacgtgagccagcttcgcttcacagtcatggcacgtgat
cgtggccagccccctaagactgacaaggcgacagtgatcatcaacatcaaagatgaaaac
gacaacgtccccaatatcgacatccggaaaatcggacgcatttttctcaaagacggtgtg
gctaatgtggcagaggatgtgattgtcgatacacccatcgctctggtccaagtgtcagac
cgagataaagggccgaacggtatagtgacatgcaccgtggtgggagatgttccgttccag
ctcaaacctgctagtgaggttgagggtgaaatgaataaaaagaagtactttctccatacg
tcagcaccacttgattttgaagcagtgcaggagtataatgtggtcattgttgctgttgac
tctgggagccctagcctctctagcaacaattcactgatcgtcaaagtgggggatatgaat
gacaatccaccagtttttaccaaaagcacagtggaagtttcatttcctgaaaacaatgct
cctggtgagcgtgttgtcacagtagtggccttagatgcagacagtggcaaaaatgcagaa
atctcctactccctggactcctctgtgaacggaatattttccatcgatgcagacacaggt
gacatccgtgtcaacaccatacttgacagggaacagacggaacgatatgagttcaaagtt
atcgccaaagacaaaggcatgcctgttctgcagggctcggccactgtggtagtcctggtg
gcagataaaaatgacaatgagccaaagttcatgcaggatgtgttcactttctatatacag
gaaaacctgcaacccaacagccctgttggcatgataacggtcatggatgccgacaaagga
ccaaatgcagacatgagtctatacattgagcaacaggaagatattttctccattgacaac
aacacaggtaccatattctcaaacatggcttttgaccgtgagcaaaaaaacacatattca
ttccgtgtcaaagctgttgatggaggcgatccgccccggtcagctacagccacggtgtcc
ctctctgtaatggatgtaaatgacaatccccccactgtcacttttccaatgaatagctca
tacacgctgcttcctccttcaagcaacataaggacggtggtcaggactgtctcagctgct
gatactgacacaggtattaatgctaacctcagctacagaatagtgggtggcaatccattt
aagttgtttgaaattgatgcatggactggggttatcttgttagttggcaaactagagcaa
aaacattttggccttcatcgactagttgtgcaagtgaatgacagtggggttccgtcacaa
agcaccaccacgttggtccacatctacgtcaacgaaacgctttccaactccactattgta
gaggcgcaagttgccaaaagtctcggtacgccactcaatgctgacattgcaggagacccc
aactatgacttgggaaagcaacgactgagcatcgccataggagttgtgtcaggcatcatg
acggtgattcttatcatcctggtggtcgtcatggcccgctactgccgtcccaagaacaag
aacggctatgaggctggaaagaaagatcatgaagatttcttcactcctcagcaacatgat
aaaggcaagaaacccaagaaagacaagaatnaagaaaagtctaaacagcttttatacagc
agcatcgtcaccgttgaggcatccaagccaaatgggcagcgctacgatggcgttaacgag
aaactgtcggacagtccgggaatgggccgctatcgctccgtcaatggtggcccaggaagc
ccagatcttgcccgccattacaaatccagctcacccctgccaaccgttcagctgcaccct
cagtctccaacggcaggaaaaaagcaccaggctgttcaggacctgccgccggccaacaca
ttcgtcggcactggagataacatatccatcggatcagaccactgttctgagtacagtagc
caaaccattaacaagtacaacaaacagccgttccgccgagtgaccttctcggtggtgagc
cagccacaggacccgcaccagggctcgctgcagagctgctacgacagtggcctggaggag
tcggagacgcccagcagcaagagctcgtccggccccagactaggtgccctccctctaccc
gaagacgcctatgagaggactacgcccgatggcagtgtcggtgaggcagagcatatggaa
aatgactctcggcccctgcctgacgtagctatgacgggtaaatgcacgcgggagtgtgac
gaatatggccactcggatgcctgctggatgcctgtgcgcacctcgcctgaacgtaggccc
aaggccacccctcccaaactctccaccttcatgacctcccccgggggcagcgttgccgaa
cagcctggcagccaggagaccctagctgttgccaacggggacccctcacacctgctgggc
gaccgtaaccgtaatctccttaacaagaagatggcctcctcctcctcatcctacgacacc
tttagttcagctggattttctgccagcgaggaaacatctcgccccaccgaggagattccg
ctagcgcccacgggtgaatacaagccgacgcaatgcggaactctcaccaggcgggaagtt
tacctgtaa
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