KEGG   Carassius auratus (goldfish): 113106364
Entry
113106364         CDS       T07313                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04382  Cornified envelope formation
caua04510  Focal adhesion
caua04512  ECM-receptor interaction
caua04514  Cell adhesion molecule (CAM) interaction
caua04518  Integrin signaling
caua04810  Regulation of actin cytoskeleton
caua04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113106364
   04514 Cell adhesion molecule (CAM) interaction
    113106364
   04518 Integrin signaling
    113106364
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113106364
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113106364
   04810 Regulation of actin cytoskeleton
    113106364
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    113106364
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113106364
   04515 Cell adhesion molecules [BR:caua04515]
    113106364
   04090 CD molecules [BR:caua04090]
    113106364
Exosome [BR:caua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113106364
  Exosomal proteins of breast milk
   113106364
Cell adhesion molecules [BR:caua04515]
 Integrins
  Integrin alpha subunits
   113106364
CD molecules [BR:caua04090]
 Proteins
  113106364
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 FG-GAP_2 Integrin_alpha LYRIC NdhN
Other DBs
NCBI-GeneID: 113106364
NCBI-ProteinID: XP_026124007
Ensembl: ENSCARG00000000507
UniProt: A0A6P6PTA6
LinkDB
Position
1:28373732..28398265
AA seq 1080 aa
MGSYRTLTLSLLSLLGLTLISAFNLDTDYVIRKTGDANSLFGFSLAMHRQLRPADKRMLL
VGSPRARALPGQKSKITGGMYNCDINSPSQSCQRVMFDNEENLAAENKQNQWMGVTVQSQ
GPGGKILVCAHRYQRRMFVGTVQEVRDLTGRCYILSEDLTINSAADEDGGDWMFCNGRNR
GHERFGSCQQGLSATFTKDYHYLVFGAPGAYNWKGVVRMEQKNHSLWEENIFDDGPYEVG
DEDQLDPDLVPVPANSYLGFSLDSGKMLTKRGQLTIVAGAPRANHSGAVVLLKKNSSMLT
AEYILEGAGLASSFGYDLAVLDINGDGWQDIVVGAPQYFIKDGDIGGAIYVYLNEEGAWD
KITPKRIEGAAYSMFGLAVENMGDVNMDGYHDVAVGAPYDSNGAGNVYIFNGSPQGLKKA
QVLGGKDHDVKLFGYSLAGNMDLDRNDYPDLAIGSLSDSVFVYRARSVISIEKTVTTTPK
ELDLTQKNCGKDICLEVKACFKFSVKPKTYNPTLKLQYSIKVESERKKLNLPSRVIFTPR
SANEFESTGQVELKGQGTESCVSRVLRLQEPLRDKLRGIPIEVSVEILNSSTHRKRQDAL
PKLLPILDSNQEATTVTKVQFIKEGCGADNVCQSDLQLQYRFHTREPNRDVFNPLPEEKG
VPILSLSDQKDIVLEIKVLNKGEDAYEAQLTSSFPKSLSYSAVRTESGEKPVTCLANQNG
SQADCELGNPFKKDAKTTLYIILSTGGISLDTTEIEIDLKLKTTSDQMQLQAIKAKAIVK
IQLLLSLSGIAKPSQVYFTGEVKGESAMKLATDVGSPIDYEFRVTNLGKPLKSFGTPSMS
IQWPKHNSQGKWLLYLMKMTSTGLGSFICSNQDEVNKLNLKDNLVSRTKREIGETPAKVG
TVSLFTDKRKYSVLSCEDGAECVTFRCPLMGMDSNAVISLRAYLWNATFLEDYAKLNYID
IIVKASLDFKTSATNIQLKNEPAQVRVTVFPERRVAQYGGLPWWIILLAILLGLLLLGLL
VFLLWKCGFFKRSKYEESIPSYNAVRIKMEERGEKPGKEEMDPREKKQWMTSWNENESYS
NT seq 3243 nt   +upstreamnt  +downstreamnt
atgggatcttacaggacactgactttatcgctcctcagtttgctgggactgacgctgatc
tctgccttcaacttggacacagattatgtaatcaggaaaacgggagatgccaacagcttg
ttcggtttctcccttgccatgcaccgacaactcagaccagctgataaaagaatgttgctt
gttggttccccaagggctagagcattgccggggcagaagtccaaaattacaggaggcatg
tacaactgtgacatcaattctcccagtcagtcatgtcaacgagtgatgtttgacaatgaa
gaaaacctggcagctgaaaataagcaaaaccagtggatgggagttactgtacagagccag
ggaccaggaggaaagatactggtctgtgcgcatcgctaccagcgccgcatgtttgtgggc
acagttcaggaggtgcgtgacttgacaggtcgttgttacatactaagcgaggacctaacg
attaatagtgccgcagatgaagatggaggagactggatgttctgtaatgggagaaacaga
gggcacgagcgcttcggatcatgccagcagggtctatctgccacattcacaaaggactat
cactatctggtgtttggagcgccaggtgcttacaactggaaaggagtggtgaggatggag
cagaagaaccattctctgtgggaagagaatatctttgatgacggcccatatgaagttggg
gacgaggaccaacttgatccagacttggtgcctgtccctgctaacagttatttaggtttc
tctctggactctggaaaaatgctgaccaagagaggtcagttgactattgttgctggggct
ccaagagccaatcacagcggagcagttgtgctattaaagaagaactcatccatgttgaca
gccgagtacatcctcgagggtgccgggcttgcctcttcctttggctatgatcttgcagtg
cttgacatcaatggagatgggtggcaggacatcgtagtcggagcacctcagtactttatt
aaggacggtgatatcggtggggccatctatgtttatctaaacgaggaaggggcttgggac
aagatcacccctaagagaattgagggagctgcttattccatgtttggtttggctgtggaa
aacatgggcgacgtgaacatggatggttatcatgatgttgcagttggtgccccatatgac
agtaacggagctggaaatgtatatatcttcaacggttcacctcaaggcctgaaaaaagcc
caggttcttgggggaaaggatcacgatgtgaaactctttggatactctcttgctgggaac
atggatttggacagaaatgattaccctgatctggcgatcggatctctctctgattcagtg
tttgtgtacagggcacggtcagttatcagcattgaaaagactgttaccaccactccaaag
gagctggacctcactcagaaaaactgtggaaaggatatatgccttgaggtgaaagcctgc
ttcaaattttcagtcaaacccaaaacctacaatcctactctgaagttgcaatactctatc
aaggttgaatctgaaaggaaaaaacttaatcttccttctagagtcatcttcaccccgcgc
tcagcaaatgagtttgaaagcacaggacaagtagagctcaagggtcagggcacagaaagc
tgtgtttccagagtcctcagactgcaggaacccctaagagacaaactgagaggtatcccg
attgaggtctctgtggagatcctgaactcatccacacacaggaagagacaggatgctctc
ccgaaactgcttcccatcctggactctaatcaagaggccaccactgttaccaaggttcag
tttatcaaggaaggatgtggtgcggataatgtctgtcagagtgacctgcaactccagtat
agattccacaccagggaaccaaacagagacgtctttaatccattacctgaggaaaaagga
gttcccatcctgtctctgagtgatcagaaggacatcgtcttggagatcaaggtgctcaac
aagggtgaagatgcttatgaagcacagctgacttcctcgttccccaaatccctctcttat
tctgccgttcgcactgaatctggtgagaaaccagtcacctgtctagccaatcagaacggg
tcacaagccgattgtgaacttggaaatcctttcaaaaaagatgcaaagacaaccctttac
atcattctgagcacgggtggaatttctttggataccactgaaattgaaattgaccttaaa
cttaaaacgacaagtgatcagatgcagttacaagcaatcaaagccaaagccattgttaag
atccagctgctgctctccctctcaggcattgctaagccatctcaggtctactttactgga
gaagttaaaggagagagcgcaatgaagttggcgactgatgtcggcagtccaattgactat
gaattcagggttacaaacttgggcaaacctcttaaatcattcggtacaccttcgatgagt
atccagtggcctaagcataactctcaaggcaagtggctgctgtacctcatgaagatgacc
tcaaccggtttaggcagctttatttgctccaatcaagatgaagtcaacaaactcaatttg
aaggataatttggtgtcacgaactaaacgtgaaattggggaaactcctgcaaaagtggga
acagtctctctttttaccgacaagaggaaatactcagttttgtcgtgtgaggatggggcg
gagtgtgtcacattcagatgtcctctaatgggaatggacagcaatgctgtcatcagtctg
agagcttacctttggaacgctaccttcctggaggactatgcaaaattgaactacattgac
attattgtcaaggcatcacttgatttcaagacctcagctacaaatatccagctgaaaaat
gaaccagcacaggtacgcgttaccgtgtttccagaacgcagagttgcgcagtatggcggt
ttgccctggtggatcatactcttggccattttactaggactccttttgctgggccttttg
gtgttcttgctttggaagtgtggatttttcaaacgctccaagtatgaagaaagcatcccc
agttataatgctgtgcggataaagatggaagagaggggggaaaagccggggaaagaggaa
atggatcctcgggagaagaaacaatggatgacttcttggaatgagaatgagagctactca
tag

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