Carassius auratus (goldfish): 113106432
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Entry
113106432 CDS
T07313
Symbol
frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113106432 (frem1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
caua04091
]
113106432 (frem1)
Lectins [BR:
caua04091
]
C-Type lectins
Lecticans
113106432 (frem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
113106432
NCBI-ProteinID:
XP_026124133
Ensembl:
ENSCARG00000067826
UniProt:
A0A6P6PSR7
LinkDB
All DBs
Position
7:complement(29068804..29098920)
Genome browser
AA seq
2162 aa
AA seq
DB search
MTAKHRIYLSFLLLGLFQQTQGSLVKTNLGLKVKRGQSVFLQEEDLQFHIRRAKDACKLE
VVLNEPITQRVGTLTPQVFDCHFLADEVKYTHNGCPILKEDTVKLRLYRFTETETYSELF
SLRVEIMEPDCNVIKFGSQNLEVPEFYGLSNVLDGNVVSFHYEHRHNIECTVRVTTLETH
LPVHGQLVTGEPEEPDGPRGDEPDSFVSLRRQLDNKARAHCKSDECLKGLKLLKITKVPC
NDFLTMGIRYHHIDPPSPDIDYIAIRLDLTDTRSRSIIQSEQVWIPVTIKDAMPNQPPKP
AFMSMFILEVDQFILTPISTATLDAEDDETPKQRLVFNITKAPSEGFITHLSDHTKPITS
FTWTDLNDMMVSYQPPNSSHTQRRNYEVEFEVHDFYFEKSQPVIVHVSIRTADTNAPRVS
WNMGLSLLEGQSRPITWDQFQIVDNDNLSAVKIITVDGLQHGRLTVRGGKGFMFTVKDIK
DGAVRYHHDDSDTTKDYIVFRITDGLHQTRHKFPINILPKDDSPPFLITNMVLELSEGQT
ALLRGSILQACDLDSSDDYIMFNITRSPEAGEIMKMPGPGITGYPVTRFLQKDLFHSIIY
YQHSGGEVFDDSFEVVLSDFHDPPNLSEPQVVVIEIQPVPDQPPREAPGVTRHLVLNETD
VIYLTKQQLHFVDLESPDSELTYTVTTPPFYSTTYSGSDAGRLFLVDSIPKFTKDPNAPM
LRLFTQHAVNFMKVAYMPPILDIGPFPQHIQFVLSVTNQQGSTTAGICFNITVLPEDNLA
PEVRVKPLMVDEGGESWVSEDHMRLSDQDSLQDSLHVELKTGPQHGSIYLDGTAMSPGQT
FTVRDLKSLKVRYRHDSSETEHDNIKFIATDGINTADFVLHVKVTLVNDEVPVLVPGLKP
VLVCAEGQEVLITIEYICATDPDSEDSTLMYMIARQPYHGVVQRNGIIVDRFIQADVTAG
FISYRHTGQEIGLQPRHDVVTFVISDGESGPVPSCCSNRAPVFNAQPPEVQNALPVYDLN
ITVYPVNNQPPAIAVGEVFMVDEGGSASITVTHLRVEDQDSAPEDLNLILVTPPQFGYIE
NVLPSPGFEKSNMGISITSFTYRDVLNGHINYVQSRHQRMEPTSDQLMLHVSDGKQQSSS
VPFYIIIHPTNDEIPEFLARNFTVREGDMKELDSSVISAVDLDVPRERLMFSIVQQPQHG
SIMSVPHGNDVTLHKRGSETPVEHFTIDDLRNGMTLMYVHDDSESEQDGFIVQLSDGKHQ
LQKHVRVKVLPVNDEEPQIIRNSGIEMEAGESSLISSAVLSAHDKDTPSSDIIYVFESVP
NHGVIQMKVGTDWVSVSAGMNCSQQVLEMNLLRYLHTGHPGAGAADFFVFHVFDGKNRSP
AQHFHITVKELEKGEIALLVKPVRTSRGERVILTTDVLLAVDGTDKPEELLYVISVPPAH
GHVEYIKHSGVQIQSFSQLDVAANLVCYVHDNRATSPKETLRFVVSNGISTRNGTLEIVV
EMTDKVLPTLVRNTGLRVPQGSSMTLSPDALFLSDPDSPHTALSFSVLQPPQYGLLLLKG
RPLLAGSNFTQQNIQDLDVTYKHTGGASQIDRFRFTASDSTERGFLLDGKVHTEPIFFTL
QIEALDCAAPQIAVLETLWKVELLKDGRYGIFISSRELKAQDLNSADADLIYHILRVPYF
GYLENYTSGEFVRQRFSQKDLNRRNIVYIINSALDALTDSLEFTVSDALGNTGASHKLEF
SWASVQLTRTEYVICESQGSVSLTIQRKGNVQDSSYVTVQVKELTASAGKDFIPASSLIQ
FDPGVVSRVWKVEIVQDSLEEADEKFEVNLVSPVGAALKDNSQATIFIKDTNGQCRESRF
RADTGLQGREVDSGPYPPHGSIQVETLPFSQSYIRGDGDIIAQAPTATKKRLRVTGNGKV
VQPSEIVRHGSDIIYKYHGIVSMAVEEDRADSGSDRKTQVTSWGQQRPPHARTVPHTNTR
AAAQPVVTQPSTKPCTPELTGFLHYNDSSAQLLRCNGDSWRPWTPNNETVKAQKCPPGWT
YHNDYCYILSAERKATWSAAARACRESYDGHLVSVLSKGVMGWLWDFSDRKPFWIGLNDR
DSKGRWEWVGGEPVTYTNWRQTPPKNRKKGTRRCVLVWRKTKWQIRDCKKGKGHRYVCHI
KM
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaaacacaggatatatttgtctttcctcctgctgggtctcttccagcagact
cagggctctctggtaaaaactaatcttggtctaaaggtgaagcgaggccagtcggtcttc
ctgcaggaggaggatctgcagtttcacatccgcagagccaaggacgcctgcaagctggaa
gttgtgctgaatgagcccattacacagcgggtgggcacactgacccctcaggttttcgac
tgtcacttcttggctgatgaagtgaaatacactcataatggatgtccgattttaaaagaa
gatactgttaaacttcgtctctacagatttacagagacagagacgtacagtgagctgttc
tctctccgtgttgaaatcatggagccggactgtaatgtgattaagtttggatcacagaat
ctcgaggtgccagagttttatggcctctccaatgttctggatggcaatgttgtgtccttc
cactatgaacacagacataatattgagtgcacagttcgggtgacaactctggagacgcat
ctacctgttcacggtcagctagtcactggggaaccggaggaaccagacgggccgagagga
gatgaacctgatagctttgtttctctacgaagacagctggataataaagccagagctcat
tgtaagagtgacgagtgtctaaaaggtcttaaactgctgaagatcaccaaagtaccatgc
aatgatttcctaacgatgggcatccgttaccaccacatcgaccctccgtctccagacata
gactacatcgccattagactggacctcacagacacccgcagcagaagcatcatccagtcg
gagcaggtctggatcccagtaaccattaaggatgcaatgcccaatcagccgcccaagcct
gctttcatgtccatgttcatcttagaggtggatcagttcatcctgactcctatctcaacg
gcaacgctggacgcagaggatgatgagacgcccaaacagcggctggtgttcaacatcact
aaagcccctagcgagggcttcatcactcacctgtctgaccacaccaaacccatcacctcc
ttcacctggacggatctcaacgacatgatggtcagctaccagcctccgaactccagccac
acacagcgcaggaactatgaggtggagtttgaagtgcatgatttctactttgagaaaagc
cagcctgtgattgttcacgtgtcaatcaggacagctgataccaatgcgccacgagtatca
tggaacatgggcctcagtctgctggaaggtcagtctcgtccaatcacatgggatcagttt
cagattgtggataatgacaacctgagtgcagtgaagatcatcactgtggacggcctgcag
cacgggagactaacggttagaggtggaaaaggtttcatgttcactgtgaaggatataaag
gacggcgcggttcgctaccaccacgatgacagcgacacgactaaagattacatcgtcttc
cgcattactgatggcttgcatcaaaccagacacaagtttcccatcaacatcctgcccaaa
gatgacagcccccccttcctcattaccaatatggtgctggagctgtctgagggccagacg
gctcttctgagaggatctatcttgcaagcctgtgatttggactctagtgatgactacatc
atgttcaacatcaccagatctccagaagcaggcgagatcatgaagatgcctggtcctggc
atcacaggatatccagtgacccgttttcttcagaaggacctcttccactccatcatctac
tatcaacattcaggcggtgaggtgtttgatgactcttttgaggtggtgctctctgacttt
catgaccctcccaatctctcagagcctcaggtggttgtgatagagatccagccagtccct
gatcagcctccacgggaagccccgggtgtgaccaggcacttggtgctcaatgagacagat
gtcatctacttgaccaagcagcagctgcactttgtggatctggagtctccagatagtgag
ctcacgtacaccgtcaccacccctcctttctacagcaccacctatagtggctctgatgca
ggaaggttgtttctggttgatagcatcccaaaatttaccaaggacccaaatgctccaatg
ctgagacttttcactcagcatgcggtcaacttcatgaaggttgcttacatgccccccatc
ctggacattggaccgttccctcagcacatccagtttgtcctgtcagtgaccaatcagcaa
ggcagcacgaccgctggaatctgcttcaacatcacggttctgccggaggataacctggca
ccagaggtgcgtgtgaagccactgatggtggatgaaggtggagagagctgggtgagtgaa
gaccacatgcgtctgtcagaccaggactctctacaggactctctgcacgtggagctgaag
accggaccccagcatggcagcatttacctggacggcacagccatgagtccaggccagact
ttcacagtcagggatctgaaaagcctaaaagttagatatcgccacgacagttctgagaca
gaacatgataatattaagttcattgccacggatgggataaatactgctgactttgtacta
catgtcaaggtgacactagtcaacgatgaggtgccagtcctcgtgccaggattgaagccc
gttttagtctgtgccgagggacaggaagtgctgatcaccatagagtacatctgtgccact
gatcctgacagtgaagacagcacactgatgtatatgatcgcccgacaaccatatcacggg
gtggttcaaagaaacggcatcatcgtggaccgcttcattcaagcggatgtaacggcaggc
ttcatttcctacagacacacaggacaagagattgggctgcagccacgtcatgacgtcgtt
acgtttgtgatctctgatggagaatcagggccagttccttcctgttgcagtaacagagcc
cctgtattcaacgcacagccacctgaagtacagaacgccctgcctgtctacgaccttaat
atcaccgtttatcccgtgaacaaccaaccaccagctatagctgtcggagaggtgtttatg
gtggatgagggagggtcagcctccatcacggtcacccatctgagagttgaagaccaggac
tctgctccagaggaccttaacctcattctggtcactccgccacagtttggatacatagaa
aacgtcctgcccagtccaggatttgagaagagcaacatgggcatcagtatcacctctttc
acttacagggacgtgttgaatggacacattaactatgtccagtctagacaccagaggatg
gagcccaccagcgaccagctcatgctgcatgtgtccgacgggaaacagcagtcctcttca
gtcccgttttacatcatcatccatccaaccaatgacgagattccagaattcctggccaga
aacttcacggttcgggagggagacatgaaagagctggactcatctgtaatcagtgcggtg
gaccttgacgttcccagagagcgtttaatgttcagcatcgtccagcagcctcagcacggc
tccatcatgagcgtgccacacggcaatgatgtcacacttcacaagcgtggatctgagacc
cctgtggagcacttcaccatagacgacctcaggaacggcatgactctgatgtacgtgcac
gatgactctgagagtgagcaggatggatttattgttcagctctccgatgggaaacaccag
ctccagaaacacgtgcgagtcaaagtactgcctgtcaatgatgaggaaccgcagattata
cggaacagtgggattgagatggaggctggggagtccagcctgatctccagtgctgtgctc
agcgctcacgacaaagacactccgtcctcggacatcatctatgtgttcgagagcgtcccg
aatcatggtgtcattcagatgaaggtgggcacagactgggtgtctgtatcagcagggatg
aactgctctcagcaggttttggagatgaacctgttgcgttaccttcacaccggtcatccc
ggagccggcgctgctgacttctttgtcttccatgtgttcgacggcaagaaccgctctcct
gcgcagcacttccacatcacggtcaaagagctggagaaaggagaaatagcattgttggtg
aagcccgtgaggacgagtcgtggggagcgtgtgatcctcaccacagatgtcttgctggct
gtagacggcactgacaagccggaggagcttctgtacgtcatcagcgtacctccagcacat
ggacacgtggagtacatcaaacacagcggggtgcagatccagtcgttcagtcagctggac
gtagcagcaaacctggtgtgttacgtacatgacaacagagccacttcacctaaagagacc
ctgcggtttgtggtcagcaatggcatatcaacccgcaacgggaccctggagatcgtagtg
gagatgactgataaggttctgcccacactagtgcgtaacaccggtctgcgggttcctcag
ggctccagcatgactttgagccctgatgccttgttcctgtctgaccctgacagcccacac
actgccttgagcttcagcgtgctgcagcctcctcagtatggtctgctgctcctgaaggga
cggccactgctcgctggcagtaacttcacccagcagaatattcaggatctggatgttaca
tacaaacacactggaggagcttctcagatcgatcgcttcagattcacagcctccgatagc
accgagagaggcttcctgctggatggaaaagtgcatacagagcccatcttcttcacactg
caaattgaagctcttgactgcgccgctccgcagatagcagtgctggaaacactgtggaaa
gtggagctcctcaaagatggtcgttatgggatcttcatttcctccagagagctcaaggct
caggatctgaactcagcggatgccgatctgatctatcacatcctcagagtgccgtacttt
gggtatctggaaaattatacaagtggtgagtttgtgaggcagcgtttctctcagaaggat
ctgaacagaaggaatattgtctacatcataaactctgctctggatgctttaactgacagt
ctggagttcactgtttctgatgcgctgggaaacaccggagcctctcacaaactggagttc
agctgggccagtgtgcagctgaccaggactgagtatgtaatatgtgagagtcaagggtca
gtctcactgaccatccagaggaagggaaatgtgcaagactcatcttatgtgactgtacag
gtgaaagaactaacagcatctgctggaaaagactttataccggcttcatctctgattcag
tttgacccaggggttgtcagtcgagtatggaaagtagagatcgttcaggattctctagag
gaagctgatgagaaatttgaggttaatttggtctctcctgtgggtgcagcgcttaaagac
aactcacaagccaccatcttcataaaggacacaaatgggcagtgcagagagagccggttc
agagcagacactggtcttcagggccgagaggtggattcgggaccgtaccctccacacggc
tccatccaggtggagactctacccttctctcagagctacatcagaggagacggggatata
atagctcaagctcccactgctacaaagaaaagactccgagtcactgggaacgggaaagtg
gttcagccctctgaaatcgttcgtcacggatctgacatcatttacaaatatcacggtatt
gtatcgatggcggtcgaggaggaccgcgcagactcggggtctgaccgaaagacacaggtg
accagctgggggcagcagcgccctcctcacgccaggaccgtcccgcacacgaacaccaga
gctgctgcacagcctgttgtgactcagccgtccaccaaaccctgcaccccagagctcact
ggctttctgcattataacgacagctcggctcagctgctccgctgtaacggggactcctgg
aggccctggaccccgaataacgagactgtgaaagcacagaagtgtcctccaggatggacg
tatcacaacgactactgttacatactgagcgccgagcgcaaagccacgtggagcgctgcg
gcgcgggcctgcagagagagctacgatggacacctggtcagtgttttgtcgaaaggagtc
atgggctggctgtgggacttcagtgacagaaaacccttttggatcggtctgaatgatcgt
gacagcaaaggccgctgggaatgggtgggtggagagcctgtcacttacaccaactggagg
cagacccctcctaaaaacaggaagaagggaacgaggaggtgcgtcctggtctggaggaag
accaagtggcagatacgagactgtaagaaaggaaagggccaccgctacgtgtgtcacatt
aaaatgtga
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integrated database retrieval system
