Carassius auratus (goldfish): 113106511
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Entry
113106511 CDS
T07313
Name
(RefSeq) exosome complex component RRP45-like
KO
K03678
exosome complex component RRP45
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113106511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113106511
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113106511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113106511
NCBI-ProteinID:
XP_026124291
Ensembl:
ENSCARG00000002615
UniProt:
A0A6P6PRZ3
LinkDB
All DBs
Position
1:29222512..29227099
Genome browser
AA seq
395 aa
AA seq
DB search
MRDTPLSNCERLFLLKAIEQKKRLDGRETYDYRNIKISFGSDYGCCSVELGKTRVFCQVS
CELVPPKDSRPTEGIMFFNLELSPMASPAFEPNRQSELLVTLNRQLERCLRNSKCIDTES
LCVVSGEKVWQIRVDVHVLNHDGNLMDAASIAAISALSHFRRPDVAIQGRDVTVFSPEER
DPIPLSIYHMPICVSFAFFLQGSYLLVDPCEREERVKDGLLVIAMNKHREICSIQSSGGI
MLLKDQVLRCSKIASVKVSEITELINKALENDRKIRKEGGKFGFAESMPKERITTLKRDE
VPVEMTDVKETANDIVNSTETTTEAVPSPVLVGMGTAQIGEGIVNSWALEEDEEDESQTE
DRKTDEVMLISDSEEEEVVILHEEAQKSTNTSGEK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagggatactccgctgtcaaactgcgagaggctttttcttctaaaagctatagagcag
aaaaaacgcttagacgggagagagacatacgattaccggaatattaaaatctcttttgga
tctgattatggctgctgtagcgtggaacttggaaaaacaagggtgttctgtcaggtatct
tgtgagttggtgcctccaaaagattcacgtcccacagaaggcatcatgttttttaatttg
gaattgtctcccatggcatcaccagcctttgagccaaacagacagtcagagttgttggtg
acgttaaacagacagctggagagatgtctgaggaactccaaatgcatagacacagagtct
ctctgtgtagtttctggagaaaaggtttggcagatacgggttgatgtccatgtgttaaat
catgatggaaacttgatggatgcagccagcattgctgctatatctgcactctcacatttt
aggcggccagatgttgctattcagggacgagatgtcactgtgttcagtccagaggagaga
gatcctattccactgagcatttatcacatgcctatatgtgtcagctttgctttcttcctg
cagggatcttatttgcttgtggacccttgtgaacgagaagagcgagtgaaggatggattg
ttggtgatagccatgaacaaacatcgagagatctgctccattcagtctagtggaggaatc
atgcttctcaaagaccaggttttaagatgcagtaaaatagcaagtgtaaaagtttctgaa
attacagagctcatcaacaaggccttagagaatgacagaaaaatcagaaaggagggtgga
aagtttggctttgctgagtccatgcccaaagagcggatcacaaccctcaagagagatgaa
gtccctgtggagatgacagatgtcaaagagactgccaatgacattgtgaacagcacagaa
actaccacagaagctgttccttctcctgttcttgttggcatgggaactgcacagataggt
gaaggcatcgtgaactcatgggcactggaagaagatgaagaggatgaatctcagacagag
gacagaaaaacagatgaagtgatgttaatctcagacagtgaagaggaggaagttgtcatt
cttcatgaagaagctcagaaatccacaaatacttctggagaaaaatga
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