Carassius auratus (goldfish): 113106516
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Entry
113106516 CDS
T07313
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04350
TGF-beta signaling pathway
caua04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113106516
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113106516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113106516
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
DCC/UNC5 family
113106516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Ig_Rha78A_N
NDNF
Ig_5
Fn3_Dep-1_3rd
GH101_dom-5
fn3_2
V-set_CD47
Arylsulfotran_N
DUF7359
Motif
Other DBs
NCBI-GeneID:
113106516
NCBI-ProteinID:
XP_026124308
Ensembl:
ENSCARG00000069337
UniProt:
A0A6P6PT76
LinkDB
All DBs
Position
7:complement(32109509..32255441)
Genome browser
AA seq
1448 aa
AA seq
DB search
MAERGARLLLSLFCLTITVSHAEKGSAVRNFSPFWFSTEPSDTLAVRGAPTLLNCSVHSE
SPAKIEWKKDGSFLSLASDDRRQVLAEGSLLISSVVHSKHNKPDEGVYQCVATIDNLGTI
ISRTARLSVAGIPRYLSQPETASVRVGDSHVLNCEVNPDLVSFIRWEQNKEPVELDQRVF
TLPSGALVISNATEADAGLYRCVIDNAGPTKTSEEAEIQILPESGEERTLEFLLEPQHVS
KAVGESVLLPCVVTGHPTAYVTWTHKDQLIEYSKGRFEVLGGGSLRIFNLTEEDAGVYSC
MADNTNGSIEAQTELTLKASPQFLKKPASIYAHEASDIIFECEVAGSPAPTIKWVKNGDA
VIPSDYFKIIKEQNLQVLGLVKSDEGFYQCLAENDAGNVQAGAQLIILDQDVAIPSPPPT
SLTRATTDRLIPGSRGGAGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGDDVTYSVYYS
LEGNNRERIVNTSRPGEMQVTIQNLMPETKYSFRVVAHNRNGPGESSAPLRVATQPEVQV
PGPAPNLQAVVTSPTTVSLRWDVPLIGNGEIQNYKIYYMEKGMDSEQDLEVNTLSYSMTG
LKKFTEYSFRVVAYNKHGPGVSTEDISVRTYSDVPSAPPQNMTVDVLNSKSIMVRWQPPP
ADAQNGEITGYKIRYRKGTRKSEAAEITSGSQLYQLIDGLQRGTEYMLRVSAMTVNGTGP
ATDWATAETFESDLDETTVPDVPSSLHVRPLVNSIVVSWTPPENQDIVVRGYSIGYGIGS
PHAKTIKVDYKQRYYTIENLNPSSHYVITLKAYNNVGEGIPVYESAITRPQSDPIDPDVD
LYELFHAPYTPVPDPLPMLPPVGVQASVLSHDTIKVTWADNSLPKNQKITDARYYTVRWK
TNIPANTKFKVANTTTLTHTVTGLKPNTLYEFSVMVTKGRRTSTWSMTAHGTTFETIPSS
APKDVTVVSKEGRPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLT
HQIQELTLDTAYYFKIQARNSKGMGPMSDAVQFRTPKAESSDKMANDQAPGILVKPGRPS
VQEFGSVGKPDVSGTGDNHILVIVIIVSVGAFTIILVVVGAFLCTRRTTTQQKKKRAACK
SANGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPRTSQDISPVDGS
MDPMLQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHHH
YHLGNLASPTRSYLHHQSSTRSIATPISHLDRAESTESVRNTPSVDLHPPSGQPSCTTDL
SETDISYHSSAAEEEPAFSTPTAHVRPTHPLKSFAVPAIPAHPMYDSAALPSTPLLSQTG
PHSVKTASIGTLGRTRTPMPVIVPSAPDVSESSRLHEDVGSNYETDELTEEMAHLEGLMK
DLNAITTA
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcccggctgctcctctctcttttctgcctcacgatcacagtttca
catgctgaaaaaggatcagcagtgaggaacttcagcccattctggttctccacggagccg
tcggatacgctggcagtgcgaggagcgccgacgctgctcaactgctcagtccacagcgag
tctcctgccaagatcgaatggaagaaagatggctctttcctcagcctggcctcggacgat
cgcaggcaggtcttggccgagggttctctgctcatcagctcagtggtccactcgaaacac
aataaacctgatgagggggtttaccagtgcgtggccactatagacaacctgggtaccatc
ataagtcgtacagctagactcagtgttgcagggataccgcggtacctcagtcagccggaa
accgcgtctgtgcgggtgggtgacagtcatgtgctgaactgtgaggtgaatccagacctg
gtgtctttcatccgttgggaacaaaacaaagagccggttgagctggaccagagagtgttc
acgctgcccagtggtgctctcgtcatcagtaacgccacagaggcagatgcaggcctgtac
cgctgcgtgatcgacaacgctgggcccaccaagaccagtgaggaagcagaaatacagata
ctgcctgaatcaggggaggaaaggacactagagtttctcctggagcctcagcatgtgtct
aaagccgttggggagagtgtgctgctcccctgtgtggtgacgggacatcccacagcctac
gtcacatggacgcacaaagaccagctcattgagtacagcaagggccgctttgaagtgctt
ggaggaggcagcctgcggatcttcaatctcactgaggaagacgccggtgtgtatagctgc
atggcagacaacaccaatggatccattgaggcccagactgagctcacactgaaggcttcc
ccacagttcctgaagaaaccagctagcatatatgctcatgaagcctcagacatcatcttc
gagtgcgaggtcgccggctcacccgctcccaccatcaaatgggtgaagaacggggatgcc
gtcattcccagcgactatttcaagatcattaaggagcagaacttgcaggtgctggggctg
gtcaagtcagatgaaggtttctatcagtgtttagctgagaatgatgctggcaatgtccag
gcaggtgctcagctcatcatattggatcaagatgtagccatcccctccccccctcccacc
tcactgacccgtgccactactgaccgtctaataccaggctccagaggcggcgctggtccc
acgccttccgccccccgtgacgttgtggcctccctggtctccacccgcttcatcaagctg
acctggcgccttcctgctgaaccgcatggagatgatgtcacctactcggtctactacagc
ctggagggcaataacagggagaggatagtgaacacaagtcgtccaggagaaatgcaagtc
accattcagaacctcatgccagaaaccaagtactccttccgcgtggtggcccacaacaga
aacggccctggagagagctcagcacccctgagggtcgccacccagcccgaagtccaggta
cctggtcctgctccaaacctacaggcagtggtcacatcccccaccacagtgagtctcaga
tgggacgtgcccctcataggcaatggcgagatccagaactacaaaatttactacatggag
aagggcatggacagtgagcaggatctggaggtgaacacactgtcctacagcatgactgga
ctgaagaagttcacagagtacagtttcagagtggtggcctataacaaacatggacctgga
gtgtccactgaggacatatctgtgcgcacatactctgatgtccccagtgctccgccacag
aacatgacggttgatgtgctgaactcgaagagcatcatggtcagatggcagcctcctcca
gcagatgcccagaacggtgagatcaccggctataagatccgctacaggaagggtacgagg
aagagcgaggcggccgagatcacttcaggatcacagctctatcagctcatagatggtctg
cagcgaggcactgaatatatgttgcgagtgtcggccatgacggtcaacggcacgggtccg
gccacagactgggccactgctgagacgtttgagagcgatctggatgagacaactgtgcca
gacgtccccagctccttgcatgtgcggccacttgtgaacagtattgtagtgagctggacg
cccccggagaaccaggacattgtggtgaggggttactccatcggctatgggatcggcagc
cctcacgccaagaccattaaagtggactacaaacagagatactacaccattgagaacttg
aatcccagctcgcactacgttatcacactgaaggcctacaacaacgtgggggagggaatc
cctgtgtatgagagcgctatcacacgaccccaatcagaccccatagaccctgatgttgat
ttatacgaacttttccatgctccatacactccagtaccagaccctttacccatgctgcct
cctgtgggcgttcaggcgtccgttctgagccacgacacaatcaaagtcacctgggcggac
aactcactacccaagaaccagaagatcacagatgcacgttactacacagtgcgttggaag
accaacatacctgcaaacacaaagttcaaggtggctaataccaccacactaactcacaca
gtgacgggtcttaaacccaacaccttgtacgagttctcggtcatggtgaccaagggccgg
aggaccagcacctggagcatgactgcacatggaacaacatttgaaacaatcccaagttct
gctcctaaagatgtgactgtggtgagtaaagagggacgaccacgaaccatcatcgtcaac
tggcagccaccctcagaagccaatggcaagatcacaggttacatcatttactacagcact
gatgtgaatgcagaggttcatgactgggtcattgagccagtagtggggaacaggctaacc
catcagattcaagagctgacccttgataccgcctactacttcaagatccaggcgcgtaac
tctaaagggatgggtcccatgtctgatgctgtccagttccgcactcctaaagccgaatcc
tctgacaaaatggctaatgaccaagctccaggtatattggtgaaaccaggaagaccctct
gtacaagaatttggatcagttgggaaaccagatgtgtctggcactggtgataaccacatt
ctggttattgtcataattgtgtctgtgggtgcatttaccatcatcctggtggtggttggc
gccttcctgtgtacacgccgtaccacaacacagcagaaaaagaaacgagcagcctgcaag
tccgccaatggatcccacaagtataaaggcaattccaaagatctgaagccaccagacctc
tggatccaccacgaacgtttggagctaaaacctatcgacaaatcgcctgaacccaatcca
gtcatgaccgacacgccaatccccagaacctcccaggacatctccccagtggacggctcc
atggatcctatgctccagagacgtaactcttaccgtggccatgaatcagaggacagcatg
tctacactggctggccgtcggggaatgagacctaaaatgatgatgccctttgatgcacaa
ccccctcagcctgtgattagtgctcaccccatccattccctcgataaccatcaccatcat
tatcacttgggcaacctggcctcgccaacacgcagctatctccaccaccagagcagcaca
cggtccatcgccacccccatctctcatctagacagggcagagtccacagagtcagtaagg
aacacccctagtgttgacttgcaccctccatctgggcagccctcctgcaccactgacctt
tcagagacagacattagctaccacagttcagccgctgaggaggagccagcattcagtaca
cccacagcacacgttcgtcccacacacccactcaagagttttgcagtgcctgccatccca
gctcaccccatgtatgactcagcagcattacccagcactccactgctgtctcagacaggg
cctcactcagttaaaacagcctctattggtacgttgggaaggacgagaactcctatgcct
gtcatagttccaagtgcaccggatgtctcggaaagtagcagactgcatgaagatgtaggg
agcaattacgagactgacgagttgacggaggaaatggcccatctggaggggttaatgaag
gacctaaacgccatcacgacagcctga
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integrated database retrieval system