Carassius auratus (goldfish): 113106596
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Entry
113106596 CDS
T07313
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113106596
Membrane trafficking [BR:
caua04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
113106596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_8
TPR_7
TPR_14
TPR_NPHP3
TPR_10
SH3_1
SH3_9
TPR_19
ARM_TT21_4th
SH3_2
Motif
Other DBs
NCBI-GeneID:
113106596
NCBI-ProteinID:
XP_026124470
Ensembl:
ENSCARG00000054433
UniProt:
A0A6P6PWM4
LinkDB
All DBs
Position
7:35158590..35177616
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AA seq
1322 aa
AA seq
DB search
MSAAVRRNSSKPGNGSESDPDGTRTIRREPSTESTHNEWDQTIESSSRDFKTLRGSVKGS
SGASDDNIPTVLAMQLAMVEGPDRLPADEGTQEVLSRKLCVLEADLSGVMTLISELSAHF
VSINSEERTICITFKTLEEIWKFSTYHKMGFLRQCLENLLMEQEFWLISLDQHSGIEISI
KEETLNLMYKGFLMQEGSFFGCCTANQMFDSSTSGSDLYLEKGDIALFEPPFLGSGWTVL
SLADGARGTKPKPALEPVIPFHEWFLKSCPESILVGGGKDTRDLPFQIAVGVCEATEEYN
ADGPDELSFQAGERIIILGLLVACFDWFMGKSERTGDIGLVKTNLVKATSSFCESSDIFL
KDEDRQIATLDQEKIKEDTIALLKTICQSDVGTNYKLDLPKEIPGSVQNKSNQMELNNLK
QKAKHILSEADESQRNDSSSVSSKQQVKKEADDTESSRDIPRFSVCLEQDNPSPDEHHAL
LSFLSSREHQPEFLLLYRAYPEFLISHFEGHSDEEEIVAYLGIARELARKKRVSWAQSRI
CFLLGQLCAGRSKFSQARVYYEEALNVPSDSFTDMFLLSAIYSNLALIYLTQKKHEHFSS
FSERLSALLMAVPDCMFGCEDPEVLKYVLKKAVLANNQPAEARACFLLAKLHLKLEDGMS
AIPFIERLLILADEVPDACDETLSQVFLVLARLYSDQRRPRLAESCAKRASLQVGATVSH
CLCSISLLLENASELYGVAVPTQVAPYLTRAAALVSPSKEPVLGHIHALCLSWLFHIHGM
PDRAVHYMSTVLDHSGVSSVGQSDTTAALLWLAWLYICNQQPGRALEVLDAVLSSLPEHC
TTQLEGVVYNMRAISYRHSADIRQAAESYRAAVEICEEFEDRRNWAVALANFGLMCLQIK
AKRLAEEYLTQSVELFSELEDEEHELSFILVLLELGKHFVSQGNYESGKIHYEWALLSAM
FINHIDSQLQATRHLCQLYEEVCPDEAQCIIYNEHQLNLLQRIGDKSLEGETLEKISQLY
LNLATEKANRAALDYTKRSLGIFIDLGRKRKEAHAWLKAGKIYHILQQTELVDLYVQVAQ
DMALSTGDTLFTLEMLEAAGDVFFNSSQDREKAICFYRDRALPIAVKTSSVRSQLRLCNK
LSELLLQLGQCSEAIEYAHTALDISFSLADDLNERVAFHRLATLYHCLGQFEMAEHHFLK
ALSLCPSPLQYDEETLYYVRVYKTLGDIVFYDVKDPFDAAGYYHLALAAAMDLGNKRSQL
ELCTQLATIYHNCLMDRELSLFFYQRARAFANDLHIRRINLAPDYSFRTTAQYKNTRTGA
TR
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgcggtccggagaaactcgtccaaacccgggaacggctcggagtccgatccg
gatggaactcgaacgatacgcagagagccttcgactgagtccacacacaatgaatgggat
cagactatcgagtcttcatctagagattttaagaccttaagaggaagcgtcaaaggttct
tcaggagcttctgatgataatataccaacagttttggctatgcagctggctatggttgag
gggccagatcgacttcctgccgatgagggcacacaggaagtgctttccaggaaactatgt
gtgctggaagctgacctctcaggggtcatgaccttaatctctgagttgtctgctcatttt
gtatccatcaatagtgaggaaaggactatatgtatcacctttaaaacacttgaagaaata
tggaagttcagcacataccataaaatgggcttcttgcgtcagtgtttggaaaaccttctc
atggagcaggagttctggttaatctccctcgatcagcattcaggaattgagatctcaatt
aaagaagagacgctaaatctgatgtataaaggctttctaatgcaagaagggtctttcttt
ggatgctgcacagcaaatcagatgtttgatagctctacgtcaggtagcgacctttatctg
gagaagggggatattgctttgtttgagcctccgttcctgggatcagggtggacagtgctg
tcacttgcagatggggctagaggaaccaaaccgaaaccagctctggagccggtcattccc
ttccatgagtggtttctaaagtcctgcccagagagtatattagtaggtggtggaaaggac
acaagagaccttcccttccagattgcggtaggggtctgtgaggccacggaagagtataat
gccgatgggccagatgaactgagtttccaggctggtgaacgaatcatcatcctgggcctg
ctggtggcctgttttgattggttcatgggaaaatcggagagaactggagatatcggcctc
gtcaaaaccaacctggtcaaagcaaccagctcattttgtgaatcatcagacatattcctg
aaagacgaggacagacaaattgctaccttggatcaggaaaaaattaaagaggacactatt
gctttattgaagacaatatgccagtctgatgtaggcacaaactacaaacttgatctaccg
aaagaaattccaggttcagttcaaaacaaatctaatcagatggaattaaacaacctaaaa
cagaaagccaaacacattttgagtgaggcagatgagtctcaaagaaatgattcttcatca
gtcagcagcaagcaacaggtgaagaaagaagcagatgatacagagtcgtcccgggatatc
ccacggttttctgtatgcttggagcaggacaaccccagtccagatgaacatcatgcacta
ctttcattcttgagcagccgtgagcaccagccggagttcctgcttttgtacagggcttac
ccagaattcctcatctcacatttcgagggtcactctgatgaagaggagatagtggcgtat
ttaggtatagcccgagaactggcacgaaagaagcgtgtctcttgggcgcagagtcggatt
tgttttcttcttggacagctttgtgcaggaaggtcaaagttctctcaagctcgggtttat
tatgaggaagccttgaatgttcccagcgactctttcactgatatgtttctgctctctgcc
atttactccaacctggcactcatctacctaacacagaagaagcatgaacatttttccagt
ttttcagagcgcttgtctgctttgttgatggctgttcctgattgtatgtttggctgtgag
gatcctgaggtattaaaatatgtactaaaaaaagccgtcctggctaacaatcaacctgct
gaggcacgggcctgcttcctcctggcgaagctccacctgaagcttgaagacggcatgagt
gctatcccattcatcgaaaggcttttgatccttgctgatgaagttcctgacgcatgtgat
gagacactgagccaagttttcctggtgttagcaagactctacagtgaccagagacggccg
cgcttggctgaaagctgtgcaaagcgagcatcacttcaggtaggagccaccgtgtcacac
tgtctttgtagtatctcgctattgctggaaaatgcatcagagctgtatggagtggccgtc
ccaacacaagtggctccatacctgacccgtgccgctgctctagtgtcccccagcaaggag
cctgtgctgggtcatatccacgctctatgcttgtcttggctcttccatatccacggcatg
cctgacagagctgttcactacatgtccactgtcctcgaccacagcggtgtgtccagcgtt
ggccagtcagacactactgctgctcttctatggttggcgtggctgtacatctgcaaccag
caacccggcagagctctggaagtgctagacgccgtgctgtcatcgcttcctgagcactgt
actactcagctggaaggagtggtttacaacatgcgggccatttcatacagacattcagcg
gacatccgacaggccgctgagagttaccgggctgcagttgagatatgtgaggagtttgag
gacagacgtaactgggccgtagcactggccaactttggattgatgtgtttgcaaatcaag
gcaaaaagattggcagaggaatacctcacccagtcagtggagctgttctctgagcttgag
gacgaagagcatgaactcagttttattttggtgcttcttgagttggggaaacactttgtt
tcccaaggaaactatgagagtgggaagatacattacgaatgggccctgctgagtgccatg
tttatcaatcacattgatagccagctgcaagccacacgtcacctgtgtcagctttatgaa
gaggtgtgtccagatgaagcccagtgtatcatctacaacgagcaccagctgaaccttctt
cagcggataggagacaagagcttagagggagagacactggagaagatcagccagctctac
ctgaacctggccaccgagaaagccaatagagctgctttagattacaccaaacgaagcctg
ggcatcttcattgacttgggcagaaaacgcaaggaggctcatgcctggttaaaggcggga
aagatttaccacatcctccaacagacagagctagtggacctctatgtacaggtagcccaa
gacatggctttgagcacaggagacacactcttcaccctggagatgttggaggcagccgga
gatgtgttcttcaacagttcacaggacagggagaaagccatctgcttttacagggaccga
gcccttccgatcgcggtgaagacgagcagtgtgcgctctcagctgaggctgtgtaataag
ctttcagagctcctgctgcagctgggacagtgttcggaggccattgagtatgctcacact
gcattagacatcagcttcagtctggctgatgatttaaacgagcgagtggcattccatcga
ctcgccacgttgtaccattgtctgggtcagtttgaaatggcggagcaccactttctgaaa
gccctgtccctgtgcccctcacccctgcagtacgatgaggaaaccctgtactatgtccgg
gtttacaaaacacttggagacatcgtcttctacgatgtgaaggacccatttgatgctgct
ggttattatcacctggccttggctgctgctatggatctgggcaacaagaggtcccagcta
gagctgtgcactcagttggccaccatctatcacaactgtctcatggaccgtgaactctcg
ctgtttttctaccagcgagcgagagctttcgctaatgatctccatattcgtcgtatcaac
ctggcaccagactacagcttcaggaccacagcccagtacaaaaacactagaactggggca
acaagatag
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