Carassius auratus (goldfish): 113107030
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Entry
113107030 CDS
T07313
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03083
Polycomb repressive complex
caua04980
Cobalamin transport and metabolism
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113107030
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
113107030
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113107030
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113107030
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113107030
03029 Mitochondrial biogenesis [BR:
caua03029
]
113107030
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113107030
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
113107030
HMT complexes
COMPASS/SET1 complex
113107030
MLL-HCF complex
113107030
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
113107030
Mitochondrial biogenesis [BR:
caua03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
113107030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
113107030
NCBI-ProteinID:
XP_026124942
Ensembl:
ENSCARG00000013922
UniProt:
A0A6P6PV09
LinkDB
All DBs
Position
8:4401356..4421507
Genome browser
AA seq
1929 aa
AA seq
DB search
MASSGTSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTAT
NQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKPK
APKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPGSNVAG
WDIPITYGVLPPPRESHTAVVYTEKTSKKSRLIIYGGMSGCRLGDLWTLDIDTLTWNKPA
ISGAPAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMS
WETILMDTLEDNIPRARAGHCTVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLETDRPQ
PPSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPTVNPTPSLPINSPK
SPVPAAAAPAAQSLPLSGVTMVPQVPSPTTGMPSSPLAASPRGPAILKVAAPHSTPGTSL
VTVRQATPGGKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAAAAAATQKIP
PSSTVLNVPAGAIVKTVAVTPGSPATVKVASPVMVANPATRMLKTAAAQVGTSAISTPNT
PTRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPITMGGSGSLISSLGKMMSVV
QTKPVQTSAITGQAGSSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTSQAGGAGTKP
TILGYSTVSPTTANKPGTTIIKTIPMSAIQQGATGLTSSPGVKSPITIITTKVVTPGTGT
PGKIITAVPKLTGAGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVSPGTVSAGKPTVTT
LVVKGTTGVTTLGTVSGTVSTSVAGANVASANASLVTPVTTLGSIATLSSQVISPTAITV
SAAQTKLATATIQSAAQPTQVTLITTPSGAEAQPAQDLPVSILASPTSEQSTTTGADAGD
GAGDGATTVTLVCSNPPCETHETGTTNTATTASAKMGNEQICSNPPCETHETGTTNTATT
CSAKMGNEQICSNPPCEMHVTGTTNTATTASVNMGGAQQMCANTPSETHDTGTTNTATTA
SCNMGSKEMGTVNSKTTSSSPTTSSASGSEPETPSSEGSAGSGAMRPENPRTGTTNTSTT
ARSNMGSDQTGTVQSSSKSQAGISSTLMPVCSNSPSETNEEGITNSSPVSGDVQQVCSNP
PCETHETGTTNTATQSSSSMGSGQTDVVQRVCSNPPCETHETGTTSTPTQASSSIGAGQN
NTVQRVCSNPPCETHETGTTNTPTQASSSVGAGQNDAVQRVCSNPPCETHETGTTNTATT
ATSSLETGEVTDQQAGDEQSDSGTSSEPSSSTEPANPTTQSRAITTVTQATPTPGPSVPE
ISSMAGSAVVAEVPGEAEAMEQTSAEAEAVAAGEEPMQTECQGELGEEGAVRVVAIDESA
AGEEGTVLQVHVAMEAQPGQGDQAEVRNFLQMEAGVEGAEAMSLAAQDSEALALPQELMS
AEGQQTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLSEGDAGH
EGQQSTTIPIVLTPQELAALVQQQQQLQEAQAAAAQQLSAAAAAAALPTEGLAPADSLND
PASESNGHEMTTAVAGAVVRLLPRTSAETLAPSSTFAPSQPMVVASPAKMQAATALAEVA
NGIESAAGKQEAPPAVVRPPVKKENQWFDVGIVKVTNMVVTHYYVPADDSAVTDDDSGAI
PDYSRMKKIELSPGTAYKFRVAGINACGRGTFSEVSAFKTCLPGFPGAPCAIKISKSPDG
AHLTWEPPSVTSGKIIEYSVYLAIQSSQTVEAKASTPAQLAFMRVYCGPNPSCLVQSSSL
SNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETNKDGSAAKPAAKRPVSSPDMKGA
GPKKARSDQ
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcggggacatcggttctgcagccgcgctggaagcgggttttgggttggtct
ggcccggttcctcgcccgagacacggacacagagctgtggccattaaagagctgatggtg
gtgttcggcggaggcaacgaaggcatcgtggatgagctgcacgtctataacacagccacc
aatcagtggtttattcctgctgtccggggagacattcctcccggctgtgctgcgtatgga
tttgtgtgtgacggcaccagacttcttgtgttcgggggcatggttgagtacggaaagtat
agcaacgatctttatgaactacaggccagtagatgggagtggaaacgtttgaagcccaaa
gcccccaagaatggcccaccaccatgtcctcgtctgggccacagcttttccctggttgga
aataaatgttatttgtttggtggactggctaatgacagtgaagatcccaaaaacaatatt
cccagatacctgaatgacctctacacgcttgagctacgcccggggtctaatgtagcaggc
tgggacatccccattacatacggcgtgcttccccctcctcgggagagccacactgctgtt
gtctacacagagaaaacatccaaaaagtctcgtctcatcatctatggcggcatgagtggt
tgccgtcttggggacctctggactttagacatagatactttaacctggaacaaacctgcc
attagtggtgcgccggcacctttgccccgcagtctccactctgccaccactataaccaac
aagatgtttgtatttggtggatgggtacctctggtcatggatgatgtcaaagtagcgaca
cacgagaaggaatggaagtgcactaacacactggcttgcttaaatctagactcaatgtcc
tgggaaaccatcttgatggacacactcgaggataatatcccaagggccagagccggacac
tgcactgtggctataaacaataggctgtacgtctggagtggaagagatggctaccgcaaa
gcctggaacaaccaagtttgctgcaaagatctgtggtatttggaaaccgatcgtcctcag
cctccgtcacgtgtgcagctagttcgtgccaacaccaactctctggaggtgagctggggg
gcggtgcctactgctgacacttacctgctgcagctgcagaaatacgacatccctgctgca
actgctgccacgtcgccaacggtcaacccaaccccgtctttacccatcaactcgcctaag
agtcctgtacccgccgctgctgctcctgcagctcagagtctgcccctctctggggtcaca
atggtgccacaagttccttcccccaccaccggcatgccaagcagcccgcttgcagcctca
cctcgtggaccagctattcttaaagtggcagcgcctcattccacccccgggacgtcactc
gttactgtgcgtcaggccactccaggaggaaaatccccagtcacggttacatcacttcct
gcaggtgtccgcatggttgtccctgcacagagcacccaggggacgccaatcggcagcagt
cctcagatgagtggcatggctgctctggctgcagctgcagctgctactcagaagatcccg
ccctcttccactgtgttaaatgttccagccggagccatcgtgaaaactgtggctgtgact
cctggatcgccagctactgtcaaagtagcttcacctgtaatggttgctaatcccgcgacc
cgaatgttgaaaacggctgctgctcaggtcggcacttccgccatctctactcctaacact
ccgactcggccgatcatcactgtgcacaaatcaggcaccgtaaccgtagcccagcaggct
caggtcgtcaccaccatggtcggaggagtcaccaaaaccataacccttgttaagagcccc
attacaatgggtggcagcggatctctgatctccagccttgggaagatgatgtctgttgtc
cagaccaaaccagtacaaacctctgcgatcaccgggcaggctggaagcagtcctgttact
ctaatacaaacgaagactcctctgcctgctggtaccatcctgaaactggtcacatctgct
gatggcaagcccaccacaatcattacaacatcacaggcaggaggggctggcaccaaaccc
actatcctgggatacagcacagtctctccaactaccgccaacaaaccaggaaccaccatt
attaaaaccattcccatgtctgctatccaacaaggagcaacgggtctgactagcagccct
ggcgtcaagtccccaatcacaattatcaccactaaggttgttactcctggcacgggtact
ccagggaaaatcataaccgctgtgccaaaactgacaggtgcaggacaacagggggtcaca
caggtggtcctgaagggggcgccagggcagcctggcactatcctgcgcactgtgcctatg
ggtggcgtgcgtctggtttcaccaggcactgtgtccgctggcaaaccgactgttaccaca
ctggttgtcaagggcaccacgggagtcacaactctgggtacagtaagcggtactgtatca
actagtgtggcaggggccaatgtggcaagcgctaacgccagcctggtgactccagtcacc
acacttggctccatcgcaacattgtccagtcaggtgatcagtcccacggccatcactgtg
tctgctgcccagaccaagctcgccaccgctacaatacaatcggcagcccagcctactcaa
gtaaccctgatcacgactccaagtggtgctgaggcccagcctgcacaggatcttcctgtc
tccatcctggcctctcccacctcagagcagtccaccaccaccggtgctgatgctggtgac
ggcgctggagatggtgctaccaccgtgacactggtctgctccaaccctccctgcgagaca
catgagactggaacgactaatacagctacaacggcttctgccaaaatgggcaatgaacag
atttgttccaaccctccatgtgagacccatgagactggaacgaccaatacagctacaacg
tgttctgccaaaatgggcaacgagcagatttgttccaatcctccctgtgagatgcacgtg
acaggcaccaccaacacagcaaccacggcctctgtaaacatgggcggagcacagcagatg
tgcgccaacacaccctcagaaacccacgacacgggcaccaccaacacagccaccactgcc
agctgcaacatgggatctaaagagatgggaaccgttaacagcaagaccacatcgtcttct
ccaactacgtcttcagcttctggttcagaaccagaaacgcccagctcagagggcagtgct
ggatcgggcgccatgcggccggagaatccccgcacggggaccaccaacacctccactacc
gcccgctccaacatgggctccgaccagacgggaacggtgcagagctccagcaagagccag
gccggcatttcttctacattaatgcctgtttgctccaactctcccagtgaaacgaatgaa
gagggcatcacaaactcttctcctgtgtctggtgatgtccagcaggtctgctcaaatcct
ccctgtgagacacatgagacgggcacgaccaatacggctacgcagtcgagctctagtatg
ggcagtgggcaaaccgatgttgtgcagagggtgtgctccaatccgccctgtgaaactcat
gaaactggcacgaccagcacaccgacccaagcctcatcttctattggtgctggacagaac
aacactgtgcagagggtgtgttccaatcctccctgtgaaacccatgaaacgggcacaaca
aacacaccgacccaagcctcgtcttctgtcggtgctggacagaatgacgctgtgcagagg
gtgtgctccaatccgccctgtgaaactcatgaaactggcaccaccaacacagccacgaca
gcaacaagcagcttagaaactggagaagtaacagaccagcaggccggtgatgaacagagt
gacagcggcaccagctcagaaccctcatcatctacagaaccagccaatcccacaacacaa
agcagagccatcaccacagtaacacaggccacgcccactccaggaccatcagtaccggag
atttcatccatggctggatctgcggtagtggctgaggtcccaggagaggccgaggccatg
gagcagaccagcgctgaggctgaagctgtggcggcgggagaagagcccatgcagacggag
tgtcagggagagctgggtgaagagggagctgttagggttgttgccatagatgaaagcgca
gccggtgaagagggcaccgtgctacaggttcatgtcgccatggaagcacagccaggtcaa
ggagatcaggctgaggtgaggaactttttgcagatggaggccggtgtggagggcgcagaa
gcgatgagtctcgccgctcaagactcagaagccctcgctctgccccaggaactgatgtct
gcagaaggacagcaaaccaccctcatggtgaccggactgactccagaggagctggcagtg
acggcagcggctgaggctgcagcacaggctgcggctacagaagaagcgcaggcccttgcc
atccaggcggtcctacaggcagctcagcaggctgtgctcagtgagggagacgcaggtcac
gaagggcagcagtccaccaccatacctatagttctgactccgcaggagctcgctgctctg
gttcagcaacagcagcagctccaggaggcgcaggcggctgcagcccagcagttaagcgct
gcagcagccgcagctgcactgcccaccgaaggcttggcaccagcagacagtctcaacgac
ccagcatctgagagcaacggccacgagatgacaactgctgttgcgggagctgtggtccgt
ctccttccacgtacctctgcagagactctagccccatcaagtacttttgcaccatctcag
ccgatggtggtagccagcccagccaagatgcaagcggccactgctttagctgaggtggcc
aatgggattgaatcagcagctgggaagcaagaagctcctccagccgttgtaaggccacca
gtgaagaaagagaatcagtggtttgacgttggaatcgttaaggtcacaaacatggttgtc
acacactattatgtgccagcagatgattcagcggttactgatgatgattctggcgcaatc
ccagattacagccgaatgaaaaagatcgagctttctccaggcactgcatacaagtttcga
gtggctggtataaatgcgtgcggccgcgggacattctctgaggtctctgcatttaagacc
tgcttacctggcttccctggagccccgtgtgccattaaaatcagcaagagccccgatggt
gctcacctgacctgggagcctccttcagtgacgtcagggaagatcattgagtattcggtc
tatctggccatccagagctcacaaacagtcgaggctaaagcatccactccggctcagctt
gcctttatgcgggtgtactgtgggcccaacccgtcctgcctagtgcagtcgtctagtctc
tccaacgcccacatcgactacaccactaaacccgccatcatcttccgcatcgccgctcgc
aatgagaagggctatggccctgcaacacaagtcaggtggttacaagaaaccaataaagat
ggctctgcagccaaacctgcagcaaagaggccagtctcgtcacctgatatgaaaggcgcc
ggcccaaagaaggccagatctgaccagtga
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integrated database retrieval system
