Carassius auratus (goldfish): 113107190
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Entry
113107190 CDS
T07313
Name
(RefSeq) integrin beta-4-like isoform X1
KO
K06525
integrin beta 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04382
Cornified envelope formation
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04518
Integrin signaling
caua04810
Regulation of actin cytoskeleton
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113107190
04518 Integrin signaling
113107190
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113107190
09142 Cell motility
04820 Cytoskeleton in muscle cells
113107190
04810 Regulation of actin cytoskeleton
113107190
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113107190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113107190
04515 Cell adhesion molecules [BR:
caua04515
]
113107190
04090 CD molecules [BR:
caua04090
]
113107190
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113107190
Exosomal proteins of bladder cancer cells
113107190
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin beta subunits
113107190
CD molecules [BR:
caua04090
]
Proteins
113107190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
FN3_DSCAM-DSCAML_C
EGF_Teneurin
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
Fn3_VIN3
Interfer-bind
EGF_TEN
vWA_SIBA-E
SEA
Ig-CFAP74_4th
Motif
Other DBs
NCBI-GeneID:
113107190
NCBI-ProteinID:
XP_026125306
Ensembl:
ENSCARG00000008833
UniProt:
A0A6P6PUR8
LinkDB
All DBs
Position
8:8485220..8512787
Genome browser
AA seq
1951 aa
AA seq
DB search
MFSRGSKIFDSLTVVVDSGLPLTEMGGWALHLAVGIYVLLLAVTASHANEVNHCTAARAK
TCSECIRIGTGCAYCPDELYEYERCDLKENLEARKCSSRMVTIESSSTIQQDVKINKSLN
YSQVAPQLMRMTLLPGEEKEVDMEVFEPISGPLDLYILMDFSNSMSDDLDNLKRMGDQLA
QLVERLSNDYTIGFGKFVDKVTEPQTDMRPSKLAMPWSNSDPPFSFRNVISLTSNISTFR
QKLQQERISGNLDAPEGGFDAILQTAVCQEYIGWRKDSTHLLVFSTESAFHYEADGANVL
AGILDRNDEQCHLTSDGNYTHDTRQDYPSIPTLVRLLVKHNIIPIFAVTNHSYDYYQKLA
EYFPIAELGQLQEDSSNILNILDKAFQNIRSKISIRAEDRPKAVDAKILSQSGTISELGY
FKINPGETGKFRVRLKALNRVGEQHVCDANQADRAGILRVKPTTFSSALRINAEVLCHTC
DCEKTPVKNAPRCNSRGDLVCGKCQCYDGWVGPFCNCSSGAFTDSSMCIEPGKTESCSGR
GDCMCGTCVCYNPNQFEGPFCQFDKSQCQRFGGFLCNERGSCSMGRCVCAPGWTGDACEC
SISNESCLDSKGGICNGRGQCKCGRCECEHSGLPLSHTCEANFQQQLGMCEAKRSCVQCQ
AWNTGENKGKKCNDCSFKIIMVEELEEDKNVIETCSFRDEDDDCTYHYTVNYPLNITDKE
HHVLVKKKKDCPPAGFLWLIPLIMFLMLLLGLLLLCCWKYCACCQACLALLPCCGRGRMV
GFKEDHYMLRQSLLTSDHLDTPMVRTGPPKSTDIVRWKVTDNVHRGPNHPQNQIKPNPKE
TIQYPVSLRLNRQYSETLSNPEARDTDMLKREVEDNLNDVFLQIPGSQRVQKTRFRTQRN
SGKRQNNTIVDTVLSAPRASYPDIVKLTDKQVQAGNFRDLKVVPGYYTVATDREAAGAVE
FQEGVESVDVRVPLFIKDEDDEKKELLVQAVDVPVGIAKIGKDHVNITVIKEHARSIFTF
LQPSYTYSRHDGVANIPISREIIEDGRTQVTYCTRDLTAKDKKDYISVDGDLSYAPGETQ
KMVPVKLLELGEGDGLLEDKQVKQFVMDLSNPRQGAKLGRYPRTTITIADKPEPSVVMFK
KSAQTCNTSDPLYSIPVVRTRNQEGPTTVHWRTNKASRFDLSSPLKFAPGETEKNIVIDP
RSYPSPIIPETFHLELFDPSNNAIIGEKKTSVVNVVDGRGDGKINTQTVEQVNALSASPG
GRLYAPTNIKAVPTGPKNIRLNWNPSANANGYKVKYWIYGDPEADAQVQDVKTPQAELTN
LYPYCDYEMRVCGYNALGEGNYSDVIQCQTLEDVPGEPGRLAFNVISPTVTQVSWAEPAE
TNGVITSYEVIYTPIDEDKKPTGPTKKVMIDNPKKRMLLIENLQPSQTYCYKVRARNKVG
WGPYREATINLASQPTRPMSIPIIPDIPIVDAEAGDEYDSYLMYSNEVLRSPTGSQRPSV
TDLTEDQFVNGKWDQNFLFPGGSGSLSRNVSSSSSTYSHSTPRLGVTNSSSTTYISGKGG
STTHRYDLRDGGLLKEEVILRKRSENRHYTDGDGVRDSIVMGNLSGGFLDSLGVSSFSQS
TTTSYSLSSRARTQSEDINDALQNLDNVLQDSRFNPGVPETPSRLVFSALGPTALKVSWQ
EPQCETDLLGYCVLYQLLSGGEVKRIEVNNPAQNSVAVQDLLPNHSYIFKVKAQSREGWG
PEREGVITIESTVDPKSPLSPMPGSPFTLSTPSAPGPLIFTALSPDTLQLSWEKPRKPNG
DILGYVVTCEQLHGGGDLRSFQVNGNAATSLTVSDLKENMPYKFKVQAQTTQGFGPEREG
IITIESQDGGSMSQYSSHSLTKREVFNLPTEITSHTTFSEPFVSSDGMMMMSSRQITESG
GTITRQVEMVQRGVMSSSTVTKKVERQYYEA
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaggggctcgaagatttttgacagcctgacggttgtagtcgacagcggactt
cctctgacagaaatgggaggatgggcactacatctcgctgtggggatctacgttctcttg
ctcgctgtgacagccagccatgctaatgaggtgaaccattgtactgctgccagggcaaaa
acctgctcagaatgtatccggattggcacaggatgtgcttactgcccagatgagctctac
gagtatgagcgttgtgacctgaaggaaaacttagaggcccgtaaatgtagtagtcggatg
gtaacaattgagagcagtagcacaattcaacaggatgtgaaaatcaataaatccctaaat
tactctcaggtggcccctcagctaatgaggatgacgcttctccccggggaagagaaggag
gtggatatggaggtgtttgagccaatcagtggccctctggatctctacatcctcatggac
ttctccaactctatgtctgatgatctggacaacctgaagaggatgggagaccaactagct
cagcttgttgaaagactctctaacgattacaccatcggatttggcaaatttgtagacaaa
gtcactgagcctcagacagacatgaggccatccaaattagcaatgccgtggtccaacagt
gaccctccgttttcattccgtaacgtcatcagtctcaccagcaacataagcacctttaga
cagaagctccagcaagagcgcatatctggcaacctggatgctcctgaggggggttttgat
gccatcttacagactgctgtctgccaggaatatattggctggaggaaagacagcacccac
ttgctggtcttctccaccgaatcagcattccattatgaagcagatggtgccaatgtgcta
gcgggcatcttggatcgtaacgatgagcaatgccatctgacttcagatggaaattacaca
catgatacccgtcaagactacccatctatacctaccctagtgcgacttctggtgaaacat
aacatcattccaatcttcgcagttactaaccactcctacgattactatcagaaactcgct
gaatacttccctattgctgagttgggacagttgcaagaagattcctctaacatcttgaac
attttagacaaagcttttcagaatattcgctccaagatcagtatacgtgcagaggacaga
ccaaaagcggtggacgctaagatactctctcagtccggcacaatttctgagttgggctat
ttcaaaatcaatccaggtgaaactggtaaatttagagtccgtctgaaggctcttaatcgg
gtgggcgagcagcatgtgtgtgatgccaaccaggctgaccgggcaggaatcttaagagtc
aaaccaaccacatttagctctgccttgagaatcaatgctgaagtgctctgtcatacatgt
gactgcgaaaagaccccagttaaaaatgcaccgcgctgtaacagccgtggagatcttgtc
tgtgggaaatgccagtgttatgatggatgggtaggccctttctgtaactgttcatcaggg
gccttcacagactcttccatgtgcatcgaacctgggaagaccgagtcttgctcgggcaga
ggagactgcatgtgtgggacctgtgtgtgctataacccaaaccagtttgaagggcccttc
tgtcagtttgacaaatctcagtgccagagatttggtggatttctctgcaatgaacgtgga
agctgcagtatgggcagatgtgtttgtgcaccgggatggactggagatgcctgtgaatgc
tccatcagcaacgaatcatgtcttgacagcaaagggggcatctgtaatggtcgtggtcag
tgtaaatgcggtcgttgtgagtgtgaacactcaggacttccactgagccacacttgtgaa
gcaaactttcagcaacaactgggcatgtgtgaagccaaaaggagctgtgttcagtgccag
gcctggaacaccggcgagaacaaaggaaagaaatgtaatgactgttcctttaaaatcatc
atggtggaagagctcgaagaagataaaaatgtaatagagacttgcagttttcgtgatgaa
gatgacgattgcacataccactacactgtgaattatccattaaacatcacagacaaggaa
caccacgtcctggtaaagaaaaagaaagactgtccacctgcaggtttcctgtggttgatt
cctctcattatgtttctgatgctattgcttggtttgcttttgctctgctgctggaaatac
tgcgcctgttgccaggcatgtcttgctcttctcccatgctgtggcagaggtcgtatggtg
ggattcaaagaagatcactacatgctacgccagtctttgttgacctctgatcatttggac
accccgatggtgcgcaccggcccgcccaaaagcacagacattgtgcgctggaaagtgaca
gacaatgttcatcgaggacccaaccacccacagaaccaaatcaaacccaaccccaaagag
accatccagtaccctgtctctcttcgtctgaaccggcaatattcagaaaccctttccaac
cccgaggctcgagacacagacatgctcaagcgagaagtagaggacaacctcaatgacgtg
ttcctgcagatacctggctcgcagagagtgcaaaagactcgattcaggacacaaagaaat
tctggaaagagacagaacaacacgattgtagacacggttttatctgctcctcgtgccagt
tacccagatattgtaaaactgacagataaacaggttcaagctggaaacttccgggatctg
aaggtggttccaggctactacactgtagccacagacagagaagcggctggggctgtggag
tttcaggagggtgtggagtcagtggatgtccgggttcccctctttatcaaagatgaggat
gatgaaaagaaagagctgcttgttcaagctgttgatgttccagtaggaattgcgaaaatc
ggcaaagatcatgtcaacatcaccgtgattaaggaacatgctaggagcatcttcaccttc
ctgcagccgtcatacacttacagtcgtcatgatggtgtggccaacatcccgatcagtcgt
gagatcatagaggacggacggactcaggtcacatactgcacccgtgacctcactgccaaa
gacaagaaggactatatctcagttgacggagacttgagttatgcaccaggcgaaactcag
aagatggttccagtgaaactcttggagcttggggagggagatggactgctggaggacaaa
caggtcaaacagtttgtgatggatctgagtaacccacggcaaggtgctaaactgggccgt
tacccacgcaccaccatcactatcgcagataaaccagaacccagtgtggtgatgtttaag
aagagtgctcagacttgcaatacatctgacccgctttactccatccctgtggtacgcact
cgaaaccaggagggtccgaccactgttcactggcgcacaaacaaagcctcacgctttgac
ctctccagtcccctcaaatttgctcctggtgagacggaaaagaacattgtgattgatcct
cgttcatatccatctcccatcatacccgagaccttccacctggaactgtttgaccccagc
aacaatgcaatcattggagagaagaaaacctctgtggtgaacgtcgttgatggtagaggg
gatgggaaaattaatacgcagacagtggaacaagttaatgcactaagcgcatcccctgga
ggacgcctctacgccccaaccaacatcaaagctgttcctaccggccctaaaaacatccgt
ctgaactggaaccccagtgcaaacgccaatggttacaaggtgaagtactggatttatgga
gaccctgaggctgatgctcaggtgcaggatgtgaagactcctcaggccgagctgactaat
ctctacccatactgtgactatgagatgcgtgtatgtggctacaatgcactcggagagggt
aattacagcgatgtcatccaatgccagactctagaggatgtacctggtgagcctggtcgc
ctggctttcaatgttatcagccccactgtcactcaggtcagctgggcggagccagcagag
acaaatggtgtcattacttcatatgaggttatctacacacccatcgacgaggacaagaag
cctacaggacctactaagaaggtgatgattgataaccccaaaaagcgcatgctgctcatc
gagaacctgcagccttctcagacctactgttacaaagtgcgtgctcgcaataaggtgggc
tggggcccgtacagagaggctacaatcaacctggcttcacaacctaccagacccatgtca
attcccatcattcctgacattcccattgtggatgcagaggctggcgatgaatatgatagc
tatctgatgtacagtaatgaagtactgcgatccccaactgggagccagaggcctagcgtc
acagatctgactgaagatcagtttgtaaatggaaagtgggaccagaatttcctgtttcca
ggaggaagcggttccctttcccgcaacgtcagctcctcctcatccacatacagccattcc
acaccccgtcttggtgtgaccaacagcagcagcacaacatacatttccggcaaaggaggc
tcaacgacacacagatatgatcttagggatggcggacttctcaaagaggaagtgatcctg
aggaagcgttctgagaacaggcattacacggacggtgatggtgtgagggattctattgtc
atgggaaacctgtctggtggatttttggacagcttaggggtctctagcttcagccagagt
acaactaccagctacagcttgagctccagagctcgtactcagtctgaagatatcaacgat
gcactgcagaacctggataatgttcttcaggactcacgcttcaacccgggtgttcctgag
actcccagcagactggtgttctccgccctggggccaacggctctgaaagtgagctggcag
gagccccaatgtgagactgatttactggggtactgcgtcctttaccagctactcagtgga
ggtgaagtaaagcgtattgaagtgaacaatcccgctcagaactctgtggcggttcaggat
ctcctcccaaaccattcctacatcttcaaagtgaaggcccagagtcgagagggctggggt
cctgagagagagggagtcatcaccattgagtctactgtcgaccccaagagtccactgagc
ccaatgccaggatctcccttcacactcagcactcccagcgctccaggacctttgatcttc
acagctttgagtccagacacgctgcagctgagctgggagaaacctcgcaaacccaacggg
gacatcctgggctacgtggttacctgtgaacagctgcacggtggaggagatcttcgctcc
ttccaggtgaatggcaatgctgcgacttctttgactgtgtctgacctgaaagaaaacatg
ccatacaaattcaaagttcaagcccagacaacgcagggctttggaccggagcgagaaggc
atcatcacaatcgaatctcaagatggaggctcaatgtcacagtacagcagccattcactc
acaaagagagaggtgttcaaccttccaacagagattacttcacacaccacgttctctgaa
cccttcgtgtcttcagacgggatgatgatgatgtcgagcaggcagatcacagagtcgggc
ggcaccatcacgcggcaggtggagatggtgcagagaggagtgatgtccagcagcaccgtc
actaagaaggtggagagacagtactacgaggcctaa
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