Carassius auratus (goldfish): 113107208
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Entry
113107208 CDS
T07313
Symbol
nphp4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
caua03037
]
113107208 (nphp4)
Cilium and associated proteins [BR:
caua03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
113107208 (nphp4)
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Gene cluster
GFIT
Motif
Pfam:
DPCD
WYL
Motif
Other DBs
NCBI-GeneID:
113107208
NCBI-ProteinID:
XP_026125338
UniProt:
A0A6P6PW15
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Position
8:8906414..8970964
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AA seq
1042 aa
AA seq
DB search
MQCVRWCAWSLFSDPEGPGENVCLHLQGGALPNPWGVMVYSASTQQTNSGKCVIKFKFSS
SVEGASCSTALNVSHRETSPPKKLLSAPQDERILEPMASTQQSPRGPALSLSQLVATSRY
PTMSHTVGSPWQQQLPSLLSPSPMASAHQLSHVERPVAGSIAHLELSVQEREGNRNEEED
EMQELTFTPVHAPVITLGTHTAGSSRSTSRRSLAQLFSSGFPQILDTQNQVAEVLDASEP
VNFNPQREEADPLQANTLILQFLAFTRVPQAGVISDWPRTVHFTFQLYRFPPVTTERLKL
LDPERNSKLKSGSDYPCVLSVINKDGTFSSGCPGLQLQYRVDPQFLKPGERGWFLRYLAL
HSLQIDVWDSESLMLIGSAAVELKHMLRQGRAAVQVNHELEVITTEYLQDASFASRHDNK
HSATPAINVYTTVKGILHLRLGNVGGSVKNSQSSLDLPPSLSHVVQPSDAPQGFAGGGVP
ALTVLQLNANNARRARRLPEIDSELARLLQSTMREVGGATLHQQAEAKEVRQRKIDRMAA
VRQLEEQKATPPFQDSSNITRHRAERVQHSRDLRVIEAYRERCKAQEITNMLSQAITTKH
TLYASLGTAEFFEFVLKNPFNVPQTVSIECDDPELCVMVKTEEWRYFKELTKTLTPLEEE
MFHVKESTQTPQVYLRPKESVHVPFKYQTFICGHTFPLQDMKGLKTSRSPQMAQKHLSNT
INAKSIKVLFRGEDRKPLAICQVDVEPMPHVVDQTFRFYQPELTFLKKAIRLPAAWDDTA
DGSATLHVRCSDHNVICHTTNLTPGEPQDVYLKVPGSPSPQIRKFFITIFTDPWLASPAQ
IWQVYVHYLQRMDLSCVCGTLSWHSLVLHGTQAIRRVKCYTSHPLELQVDPGEVFALPAH
GVQDVCVGLRALRPGSRFFYLNVVDVDTRQLVASWLLCITCRQPVISKAFEISVPVDGGK
GSNKKISFTNPYSSSRVFNLRTDRPDLLQFKEEQFQIGGGELYTIGLRFAPSQNPGMEEI
LIFINDKQDKNEDTYCVRVQYR
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtgtgcgttggtgtgcttggagtctgttttcggatcctgagggccctggagag
aacgtgtgcctccacttgcagggcggtgctctccccaacccttggggtgtcatggtctat
tctgcaagcacacagcagactaattcggggaaatgtgtcatcaagttcaagttttcatct
agtgtggaaggagcttcttgcagcacggcattgaatgtgagccaccgggaaacatcgcca
cctaagaagttactttcagcaccccaagacgaacgcatcttggagccgatggcttcgacg
cagcagtctccacgcggcccagcgctgtctctctctcagctggttgcgacttcacgctac
ccaaccatgagccacacggtggggtctccatggcaacaacagctcccctctctgctttct
ccctccccgatggcatcggcccaccagctgtcacatgtcgagcgtccagttgccggcagc
atagctcatctggagctgagtgtgcaggagagagagggaaacagaaatgaggaagaggat
gagatgcaggagctgaccttcactccagtgcacgcccctgtcatcaccctcggaacacac
actgctggctcctccagatcgacctcccggagatctttggcccagcttttctcctctggt
tttccacagatcctggacactcagaaccaggttgctgaggttctggatgcttccgagcct
gtgaactttaacccccagagagaagaagcagatcctctgcaggccaacactctcatcctt
cagttccttgcttttaccagggtcccacaagctggtgtaatttcagactggcccagaact
gtccatttcaccttccagctttaccgatttccccctgtcaccaccgagcgtctgaagctg
cttgacccggagaggaacagcaagctgaaatccggctctgattacccctgtgttctctct
gttatcaacaaggacggcacattcagctctggctgtcctggtctgcagctgcagtacaga
gttgacccgcagttcctcaagccaggcgaacgaggctggttcctgcgatacctggcactc
cactccctgcagattgatgtctgggacagtgaatccttaatgcttattggctcagctgct
gtggagctgaagcatatgctccgtcaaggccgtgcagccgtccaggtgaaccatgagctg
gaagtgatcactactgagtacctgcaggatgccagctttgccagcaggcatgacaacaag
cacagcgccactccagccatcaacgtctacactaccgtaaaaggaattctgcatctgcgg
cttggcaacgttggtggcagtgtgaaaaattcccagagttctttggatcttcctccatcg
ctctcccatgtggtccagcccagcgatgcccctcagggttttgcaggaggaggtgtcccc
gctttaacggtcctccagcttaacgcaaacaatgccagacgagcccgccgattgccagaa
attgacagtgagctggccagactgctacaaagcaccatgagggaagtaggcggagccaca
ctgcatcagcaggccgaagcaaaggaagtgcgccagaggaagattgacagaatggcagct
gtccgtcaactcgaggagcagaaagccacgcccccttttcaggacagctcaaacatcacg
aggcatcgggcagagcgtgtgcaacattcccgtgacctgcgtgtgattgaggcctatcgt
gagcgctgtaaagcacaggagatcaccaacatgctctctcaggccatcactaccaaacac
actctctacgcctcgctaggaacggcagagttcttcgaatttgtgctcaagaatccattc
aatgttcctcagaccgtctctattgaatgtgatgacccagagctctgtgtaatggtgaaa
actgaagagtggagatatttcaaggagttgacgaagactctgactcctctagaggaggag
atgtttcatgtaaaggagagtacacagactccacaggtttacctgcggcccaaagaaagc
gtccatgtccccttcaagtaccagacctttatctgtggtcacaccttccctcttcaggat
atgaaaggcttaaagacttcaagaagtccacagatggctcagaaacatctgtccaataca
attaatgccaaatccatcaaggtgctgttccgcggggaagacagaaagcctctggcgatc
tgccaggtggatgttgaacccatgccacatgtggtggaccagaccttccgattctaccag
cctgaactaacctttctaaagaaggccattcgcctgcctgcagcctgggacgacacagca
gatggttctgccaccctccatgtgcgctgcagcgaccacaatgtcatctgccacaccacc
aacctgactccaggagaaccacaggatgtttacctgaaagtacctggtagcccaagtcca
cagattaggaaattcttcatcacaattttcactgacccttggctggcctcccctgcgcag
atctggcaggtatacgtgcattacctgcaaaggatggacctgagctgtgtgtgtggcact
ctgagctggcattccctggttctgcacggcacacaagccattcgcagggtcaagtgctac
acgtcgcatcccctcgagcttcaggtggatccaggtgaagtttttgctcttcctgctcat
ggagttcaggatgtctgtgtgggtcttagggctctgcgccctggaagccgtttcttttac
ctcaatgtggtcgacgtggacactcggcagctggttgcctcctggctgctgtgcatcaca
tgtcgacagcctgtaatctccaaggcgtttgaaatcagcgttcctgtagatggagggaag
ggcagcaataagaaaatcagtttcacaaacccctactcgtcctccagagtattcaatctg
cgcacggatcgcccagacctgcttcagtttaaagaggagcaatttcagattgggggaggg
gagctgtacaccatcgggctgcgctttgctccaagtcagaaccctggcatggaagagatt
ctcatctttatcaatgacaaacaggataagaacgaggacacttactgtgttagggttcag
taccgataa
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