Carassius auratus (goldfish): 113107216
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Entry
113107216 CDS
T07313
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04217
Necroptosis
caua04620
Toll-like receptor signaling pathway
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
113107216
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113107216
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113107216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
caua04054
]
113107216
04090 CD molecules [BR:
caua04090
]
113107216
Pattern recognition receptors [BR:
caua04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
113107216
CD molecules [BR:
caua04090
]
Proteins
113107216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Tlr3_TMD
TIR_2
LRR_9
TIR
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
113107216
NCBI-ProteinID:
XP_026125356
Ensembl:
ENSCARG00000020274
UniProt:
A0A6P6PUZ3
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All DBs
Position
1:30595356..30600377
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AA seq
901 aa
AA seq
DB search
MELMKLILLPFFCMCFHGHTAYPHKSTCTIKNAKADCSHMNLDAVPTDLPKNITTLDMSH
NRLKTLSSLHLYSNLVTIDASYNSLTAIEKDLCLSVPRLQILNVQHNEVYLISEKDLKNC
FHLTRLDLSDNRLKLNGEPFSVLKSLTWLDVSRNKLKSAKLGTHPQLPNLITLVLSGNQI
SVLQKNDFSFLSNSSAFRVLILSSLSLKKVESGCFQAIARLSDLVLDHCKVSPQLTTSLY
EELAGTALRNLSLKNIQQVTLSNTTFQGLEKTNITVLDLSSNTMSKIAEEAFQWFPRLEI
LSLEHNTLRHLTNGTFRGLGNLRQLNLQKALIKSHTSSLPNIEDFSFHHLVQLEHLCMAN
TAFREITGHIFSGLLNLKTLDLSWSITGLKMVTNRTFASLQESPLLQTLNLTAMGINKLA
PGAFSSLGNLTTLLLSHNFIYQQLKGDEFEGLSNIKQMDLSMNQQSISLTNTSFIHVPTL
RSLKLGRALKGTLAMEPSPFKPLINLTFLDLSNNNIANINACLLKGLNHLKVLKMQHNNL
ARLWKTANPGGPVLFLQDATKLSVLDLDYNGLDEIPLNALRGLSELRELSLHGNLLDQLH
ASVFDDLQSLKYLYLQKNLITSVQRVTFGVPLSNLTELYMDHNPFDCTCESILWFSEWLN
STSASIPGFPQSYICNTPNAYFNHSVMKFDPLSCKDMTPFKALYILSSTAVLMLLFAAFL
VHFQGWRIQFFWNIMVNRMLASLEDESITEGRYAYNAYIIHSAEDRPWVERSLLPLEDEK
FHFFLEDRDAVPGFSQLDTIVENMGQSRKILFVITEKLLKDPWCRQFKAHHALHQVMEDN
RDSLILIFLQDVTDYSLNRSLHLRRGMLKPHCILYWPLHRERIPAFHQKLRSALASTNKV
N
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgaaactcatattgttgccctttttctgcatgtgttttcatggacacact
gcatatccacacaagtcaacatgtacgattaagaatgccaaagcagactgcagtcatatg
aatctggatgcagttccaacggacctaccaaaaaatatcaccacattggacatgtctcac
aatagacttaaaactctgtcttctctgcatttgtactcgaatctggtgactatagacgcc
agctacaactctttaactgcgatagagaaggatctatgtctttctgttccacgcctgcag
attcttaatgtgcaacacaatgaagtgtatttgataagtgagaaagacctgaaaaactgt
tttcatttaacaagacttgacctgtctgacaacagactgaagctaaatggagagccgttc
tctgttctaaagagtttgacatggttggatgtatctcgaaacaaactgaaatcagcgaaa
ctgggcacacaccctcagctgccaaacctaatcaccctcgttctctctggaaatcaaatt
tctgtgctgcaaaagaatgacttctcattcctcagtaattcttctgcatttcgggttctg
atactctcgtctctgtctcttaaaaaggtagagagtggctgtttccaggctattgctaga
ctttctgacttagtcctggatcactgcaaggtcagccctcagttgaccaccagtctttat
gaagaacttgctggcacagctttgagaaacctttcccttaagaacattcaacaggtgact
ctctcaaacacaactttccaaggtctagagaagactaacatcacagtgctcgacctcagc
agcaacacaatgtcaaagattgcagaagaagcctttcagtggtttccccgactggaaatt
ttatccctggagcataacactcttagacacctaactaatggcactttccgtggattggga
aacctgaggcagcttaacctgcagaaagcactgattaagagtcatacatcatcattaccg
aatattgaagacttctctttccaccatttagtccaattagagcatctatgcatggcaaat
actgcgttccgagagataacagggcatatattttctggacttctgaacctaaagacactg
gatttgagttggagcatcacagggttgaagatggtcacaaacagaacatttgcttctttg
caagaatctccactccttcagactcttaatcttactgccatgggtatcaacaagttggca
cctggggccttttcaagtttgggcaacctcactacactcctgcttagtcacaatttcatt
tatcagcaattgaaaggagatgagttcgagggcctctctaacattaaacagatggactta
tctatgaaccagcaaagcatttcccttaccaatacatcattcatccacgtcccaacatta
aggagtctaaagctcggccgtgccctaaaagggactttagctatggaaccatctccattc
aagccacttatcaacctcacatttctagatctcagtaataacaatattgcaaacataaat
gcttgcttgctgaaaggactcaaccatctgaaagtgctgaaaatgcagcacaacaacttg
gctaggttgtggaagacagccaaccctggtggtccagtgttgtttctccaggatgccaca
aaactgtctgtcctggatctggattacaatggtttagatgagattccactcaatgctttg
cgcggcctttcagagttacgtgagctaagtctccatggtaatcttttggatcagctgcat
gcctctgtttttgatgacctacagtctttaaagtacttgtatcttcaaaagaaccttata
acctctgtccaacgagtcacttttggtgtgccgctgtccaacctgacagaactttacatg
gaccacaacccctttgactgcacctgcgagagcatcctgtggttctctgagtggcttaac
tctaccagtgccagcattcctggattccctcaaagttacatctgcaacaccccaaatgcc
tactttaaccactctgtcatgaaatttgacccattgtcctgcaaggatatgacacctttt
aaggcactgtacattttgagtagcacagcagtgttgatgttgttatttgcagctttcctg
gtacacttccagggatggagaatccagttcttctggaacataatggtaaaccgtatgctg
gcgtcactggaggatgaaagcattactgaaggtagatatgcatataatgcatatatcatc
cacagtgctgaggacaggccatgggtggaacgaagcttgctccccttagaggatgaaaaa
ttccatttttttcttgaagacagagatgcagtacctggcttttctcaacttgacaccatt
gttgaaaacatgggacagtctaggaaaatcctttttgttattacagaaaagcttctaaag
gatccatggtgtcggcaatttaaagcccatcatgcacttcaccaggtaatggaggacaat
cgtgactcgctgattctgatttttttgcaagatgtaactgattacagtctgaaccgctct
ctgcatcttcgtcgtggcatgttgaaacctcattgtatcctctactggcctttacacagg
gaacgaatcccagctttccatcagaaactccgctcagcattagcttctaccaacaaggtc
aactaa
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