Carassius auratus (goldfish): 113107329
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Entry
113107329 CDS
T07313
Name
(RefSeq) mediator of DNA damage checkpoint protein 1-like
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113107329
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
113107329
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
Motif
Other DBs
NCBI-GeneID:
113107329
NCBI-ProteinID:
XP_026125541
UniProt:
A0A6P6PVJ1
LinkDB
All DBs
Position
1:30985449..31184341
Genome browser
AA seq
2180 aa
AA seq
DB search
MASPGDDSASSAQLDQAESADATPEQAFREAQKWIEAATGRSFGDKDFRSGLENGILLCE
LLSSIKPGLVKKINRLPAPIAGLDNLTMFLRGCEELGLKGSQLFDPGDLQDTSIRANLTG
SDCNRKLKNVLITIYWLGKAANSCAMYNGPTLDLKEFEGLLSMMRKECVNEELESPKRSI
RDSGYIDSCESERSDSLSPPRHGREDSFDSLDESFGSRSQNTPSPDTVIRCNSDDSEGDA
GQRKLPDVRKDDMSARRVSFKEPRAALPFNQYLPNKSNQTNYIPAPLRKRRSEREEDWRS
LSNSTSPVGGERPLRQERVEVLKEGAVESRSLALQKNFTWADEKGVELEEAELKKMRKLE
KAGIKVLPASVRYKSPFVNPVEASKAKPPSPDIILRRDNEFMRAAAPHQWDSNEEDEDEE
AERKVPDVQKDDLASRRARMNQFKPSVAHHFLPGSCSGKDREKWEGIRLASQHAVLERME
KMAQEKRSQADSASPEVSIITRKDNPFLNPEKDRGKERDEEDKKEVEGRIVVPNPHKDDL
ARRRTGGGPRPPKDAHQSLVQTSITQSDLETWQRLKINTDSSESDSTGAEVSIITRKDNP
FLTSEKDSECKQENEEGTDREKGARVVMPDVKTDDLARRRGKNGPVPQRDPCQSLAQTTI
NQSDLEKWQKLKMNTESSDDPIVPLCQTCLEKGCHSVASKTKVAKNDLASCQERSSGERR
RFVTFGGVTEMESTSWKEEEDEEGEEGQGDEAGKLRYLLSMAPVAVPTIGLGSRLTKRAA
GSGDANPEPAPIMPPEPPNPFMFDLKRPLTSTEHRVLEEELAEKVKGEREDDEEDEEEER
QPDVEKDDMLARRTGAFQKPANGTSHNRFLPQPGSKRDGATVASLAQKGSIQMGTSGDRD
FQYLERNIKTKRTKIGQRNEPVDQVPKTPVPVAVVPEKCPDIVRLSATNTNRPGIYTDDE
ECGDFQKDEMLAQRTGSYQKSSAGQDLNAFLPKPVAVKHKITPVGGSQSHVKPREQETAP
SLDSFALSSVAPPPRDAEDTPRKCPQMMDRQEAGSVGVVGHESLIKDEPITKSPSPKPHQ
PSRRPLWQEDDDLPPIFRATSVSETESVSLIDMRDEEDELAYLQPHSQSRHEHLHNQYNK
LREEEDQWQDDLARWKNRRRSASQDLIKKEEERKMMEKLMSTDGGPGHRRKSIKTYREIV
EEKERREQELHEQYCKASTPEEKAAVLQRYALRFTISDAILEKLQLPKLPSAASPMHTSP
LHQPEKKLTCTALAEAEDVEPELTTQTHHSVHVDQKTAEKQAQAQPETPEPSSDETTNAP
KVLSVPTPVPPVPSKPVPLITPKPYSQPKFSQGLRKSIKSDGLIRVNGDGTLQESRERDD
KDSVSCPQVDLSSSPPNPVTQSQLNEELIALEASDLQQSSQTSVSDQEKEAAKKEKECSL
SPEEEKRKDISTTPSLSEPEGKQPGPDTVMKLNCVVTTTIVTELTQTQTVPANDTSSTEQ
LDSDCNSCDLSSAAESTTAEQTSHSLSLTESSHSSNSSRLRWEFFAPTEGTDYSMDCIET
PMLNLAKRVDHWTWDPNEERRRQEKWQQEQERLLQEKYQREQEKLKEEWERAQREVEEEE
RRHHEEERQILEETVTPLTPHTSGLSSNMVTEAPPPTQPSAPCDTIVLSLADWERKQEVL
EKQADQSNRHSPDQVNTAAQQNGQRTEPQESQTATPQLQFIQDGSWSHKTKERQEDLKKT
ASLDRKQSPPQSQTTKMRSGDANPEPAPIMPPEPPNPFMFDLKRPLTSTEHRVLEEELAE
KVKGEREDDEEDEEEERQPDVEKDDMLARRTGAFQKPANGTLHNRFLPQPGSKRDGATVA
SLAQKGSIQMGTSGDRDFQYLERNIKTKRTKIGQRNEPVDQVRKTPVPVAVVPEKCPDIV
RLSATNTNRPGIYTDDEECGDFQKDEMLAQRTGSYQKSSAGQDLNAFLPKPVAVKHKITP
VCGSQSHVKPREQETAPSLDSFALSSVAPPPRDAEDTPRKCPQMMDRQEAGSVGVVGHES
LIKDDPITKSPSPKPHQPSRRPLWQEDDDLPPIFRATSVSETESVSLIDMRDEEDELAYL
QPHSQSRHEHLHNQYNKLREEEDQWQDDLARWKNRRRSASQDLIKKEEERKMMEKLMSTD
GGPGHRRKSIKTYREIVEEK
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcccggagacgattcggcttcaagtgcccagctggatcaagctgaatctgct
gacgctacgccagaacaagcgtttcgagaggctcaaaaatggatcgaggcagcgacagga
agaagttttggcgataaggatttcagaagcggccttgagaacggcattctgctctgcgag
ttgctgagttcaatcaaaccaggccttgtgaaaaagatcaacagacttccagcacccata
gcaggactggataatctgaccatgtttctgagaggatgcgaagagctgggattgaaggga
tcacagctgttcgatcctggagacctgcaggatacttcgatacgagcgaacttaacgggc
tctgactgtaatagaaagctgaagaatgtgctcataaccatatactggcttggtaaagct
gctaacagctgtgcaatgtataacggccccactctcgacctgaaagagtttgaggggctt
ctttccatgatgcgaaaggagtgtgtaaatgaagagttagagtcccccaagcgcagtata
agggacagcggttacatcgacagctgcgaatcggagcgttctgattcgctgtcgcctccg
aggcacggtcgtgaagattcgtttgacagtctcgacgaatcgtttggctcacgatcacag
aacacaccctcaccagacacagtcattcgctgcaacagtgatgactctgaaggtgatgct
ggtcaaaggaagttgccagatgtgcgcaaggatgacatgtctgcccgtcgcgtgtccttc
aaagagcctcgcgcagctctaccctttaatcagtatctgccgaacaaaagcaaccaaacc
aactacattcctgcccccctgaggaagaggaggagtgagagagaggaagactggaggagc
ctgagcaactcaacatctcctgtaggaggagaaagacctctcagacaagagcgtgtagaa
gtattaaaagagggggccgtcgaatctcgcagccttgcgctccagaaaaatttcacctgg
gcggatgagaaaggggtagagcttgaggaggcagagcttaagaaaatgaggaagctggaa
aaggcgggaattaaagtattacctgcctctgtgcgatacaaaagtccatttgtgaatcct
gtggaggccagtaaagccaaaccaccctcaccggacatcattctccgacgtgacaatgag
ttcatgcgggccgccgctccacatcagtgggactcaaatgaggaagatgaggatgaagaa
gcagaacggaaggttccagatgtccaaaaagatgatcttgcttctcgcagagcacgcatg
aatcaatttaaacccagtgtggcgcatcacttcctgccaggctcttgtagcgggaaggac
cgagaaaaatgggagggaatcaggctggcatcccaacatgctgtgttggagaggatggag
aagatggcacaggagaaaagaagtcaggctgactccgcctcccctgaggtgtcaatcata
actcgtaaggacaaccctttcctgaatcctgaaaaagacagaggaaaagagagggatgag
gaagataagaaagaggtagaggggaggatagttgtcccaaacccacacaaagatgatcta
gcaagaaggcggactgggggagggccacgccctcccaaagatgctcatcagtcattggtc
cagacttccatcactcagtcagacctggagacatggcagagactcaagattaatacagat
agcagtgagtctgactccaccggtgctgaagtgtcaatcataacccgcaaggacaacccc
ttcctgacctctgagaaagacagtgagtgtaagcaggagaatgaggagggaacagacaga
gagaaaggggcgagggtggtgatgcctgatgtaaagacagacgacctggccagaaggcgg
ggcaaaaatgggcctgtcccacagagggacccctgtcagtcattggctcaaactaccatc
aatcagtcggacctggagaaatggcagaagctcaagatgaatacagagagcagcgatgac
cctattgtccctctgtgtcagacgtgtcttgagaaaggctgccactctgttgcctccaag
acgaaggttgccaagaatgacctggccagttgccaagaacgttcctccggtgaacggagg
cgttttgtgacttttgggggtgtgacagagatggaaagtacttcctggaaagaggaagag
gatgaggaaggggaagagggacagggggatgaggcagggaagcttcgatatctcctctcg
atggcacctgttgctgtgcccaccatagggctgggctccaggctgacaaagagagcagct
ggcagtggagatgcaaaccctgagcctgctccaatcatgccccctgaacctccgaaccct
ttcatgtttgaccttaaacggcctttgacctccaccgagcacagggtgctggaagaggaa
ctggctgagaaagtgaagggtgagagggaggatgatgaagaggatgaagaagaagagagg
caaccggatgtagaaaaggatgacatgctagctcgtagaacaggagcgtttcagaagcca
gctaatgggacttcacataaccgattcctcccgcagccgggttcaaagagagacggtgct
acagtggcttccttagcccagaaaggaagtattcagatgggcacgagtggagacagagac
ttccaatacctggaaagaaacattaagacaaagagaaccaagattggacagagaaatgaa
ccagtcgaccaagtaccaaagacacccgttccagttgctgtagtaccagaaaagtgccct
gacatcgtacgtttgtctgcaactaacaccaatcgccctggcatttacacagatgatgag
gaatgtggggattttcagaaggatgaaatgcttgctcaaaggactggatcttaccaaaag
tcaagtgcaggacaggatttgaatgcctttttgcccaaacctgttgctgtcaaacataaa
atcacccctgtcggtggatcacagtcacacgtcaagcctagagagcaagagacagcccca
tctttggacagcttcgcccttagctctgtggccccgcccccaagagatgctgaggacacg
cctaggaagtgccctcagatgatggacaggcaggaggcgggctctgtgggtgtggtggga
catgaaagtcttattaaagatgagcctattaccaaaagcccctcccccaaacctcaccaa
ccctcacgtcgccccctttggcaggaagatgatgatctccccccaatattcagagctact
agtgtttctgaaacggagagtgtgagcttgattgacatgcgtgatgaagaggatgagctg
gcctaccttcagccgcacagccaatcacgacatgagcacctacacaaccagtacaacaaa
ctccgagaggaggaggaccagtggcaggacgacttggctcgctggaagaatcggaggcga
agtgcatctcaagatttgatcaagaaggaagaagagaggaagatgatggagaagctaatg
tcaacagatggaggacccggccatcgccggaagagcatcaagacatacagagaaatcgtt
gaggagaaagaacgtagggaacaggagctacatgaacaatactgtaaggcctccactcca
gaagaaaaggcagctgtgcttcaacgctatgctctccgtttcaccatcagtgatgccata
ctggagaaactccagctccccaagctgccttctgcggcttcaccgatgcacacctcacct
ctccatcagcccgagaagaagctgacttgcaccgccttagcagaagcagaggatgtagag
cctgaactaactacccaaacacaccacagtgtccatgtggaccagaagactgcagaaaaa
caggcacaggcacagcccgaaacccccgagccatcatctgatgagaccacaaacgctcca
aaagtcctgtcagtgcctacaccagttcctcctgtcccctcaaagcctgttcccctgatc
accccaaaaccctacagccagcccaaattcagccaaggcctccgcaaatcaataaagagc
gatgggctgatacgtgtgaacggtgacgggactctgcaagagagcagagagagggacgat
aaagattctgtgtcatgtcctcaagtcgacttatcttcctcacctccaaatccagttact
caaagtcaacttaatgaggagcttattgctttagaagcctcagacctccagcaaagctca
cagacgtccgtttctgaccaggagaaagaagccgcaaagaaggaaaaagagtgttctctt
agtcctgaggaagagaaacgcaaagacatctcaactacaccgtcgctgtcagaaccagaa
ggaaagcagccagggcctgacacagtgatgaagctcaactgtgtggtcacaacaaccata
gtgacagaactcactcagacacagaccgtcccagcaaatgacacgtccagcacagagcag
cttgattcagactgtaactcatgtgacctgagctcagctgccgagtccaccacggctgag
cagacttcacactctctctcactgacagagtcctcacattcctctaatagctctaggtta
cgctgggagttcttcgctccgacagaggggactgactactccatggactgtattgaaacc
ccaatgttgaaccttgcaaaaagggttgaccactggacgtgggatcctaatgaagagcgt
agacggcaggagaagtggcaacaggagcaggaacgcctgctgcaggagaaatatcagcga
gagcaggagaagctgaaggaggagtgggagagagcgcagagagaagtggaagaggaggag
aggagacaccatgaagaggaaagacagatactggaggaaaccgtgaccccactgacccct
cacacatcaggtttatcatccaatatggtgacagaagctccgccccccacccagccctcg
gccccatgtgacaccattgtcctctccttggctgactgggaaaggaaacaggaagtgctg
gagaagcaggcggaccagagtaacagacacagccctgatcaagtaaacacagcagctcag
cagaacggtcagagaaccgagcctcaggagagccaaacagctacaccacaactgcagttt
atacaggatggctcttggagccataagactaaagaaaggcaagaggatttgaagaaaact
gcttcactggatcgtaaacagagtccaccccagagccagaccacaaagatgaggagtgga
gatgcaaaccctgagcctgctccaatcatgccccctgaacctccgaaccctttcatgttt
gaccttaaacggcctttgacctccaccgagcacagggtgctggaagaggaactggctgag
aaagtgaagggtgagagggaggatgatgaagaggatgaagaagaagagaggcaaccggat
gtagaaaaggatgacatgctagctcgtagaacaggagcgtttcagaagccagctaatggg
actttacataaccgattcctcccgcagccgggttcaaagagagacggtgctacagtggct
tccttagcccagaaaggaagtattcagatgggcacgagtggagacagagacttccaatac
ctggaaagaaacattaagacaaagagaaccaagattggacagagaaatgaaccagtcgac
caagtacgaaagacacccgttccagttgctgtagtaccagaaaagtgccctgacatcgta
cgtttgtctgcaactaacaccaatcgccctggcatttacactgatgatgaggaatgtggg
gattttcagaaggatgaaatgcttgctcaaaggactggatcttaccaaaagtcaagtgca
ggacaggatttgaatgcctttttgcccaaacctgttgctgtcaaacataaaatcacccct
gtctgtggatcgcagtcacacgtcaagcctagagagcaagagacagccccatctctggac
agcttcgcccttagctctgtggccccgcccccaagagatgctgaggacacgcctaggaag
tgccctcagatgatggacaggcaggaggcgggctctgtgggtgtggtgggacatgaaagt
cttattaaagatgatcctattaccaaaagcccctcccccaaacctcaccaaccctcacgt
cgccccctttggcaggaagatgatgatctccccccaatattcagagctactagtgtttct
gaaacggagagtgtgagcttgattgacatgcgtgatgaagaggatgagctggcctacctt
cagccgcacagccaatcacgacatgagcacctacacaaccagtacaacaaactccgagag
gaggaggaccagtggcaggacgacttggctcgctggaagaatcggaggcgaagtgcatct
caagatttgatcaagaaggaagaagagaggaagatgatggagaagctaatgtcaacagat
ggaggacccggccatcgccggaagagcatcaagacatacagagaaatcgttgaggagaag
tga
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