Carassius auratus (goldfish): 113107343
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Entry
113107343 CDS
T07313
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113107343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113107343
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113107343
mRNA degradation factors
5'-3' decay
Lsm complex
113107343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
113107343
NCBI-ProteinID:
XP_026125565
Ensembl:
ENSCARG00000020691
UniProt:
A0A6P6Q009
LinkDB
All DBs
Position
8:13383788..13385930
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQILQRVSIEEILEEQRTEQQAKQESERLKLQAVKER
GLSIPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccagggactgcgagcctcatcgaggacattgataagaaacaccttgtt
ctgcttcgcgatggaagaacattgattgggatcctcagaagcatagatcagtttgctaat
ttagttttgcatcaaactgttgaacgtattcacgttggtaagaaatttggtgacatacct
cgtgggatatttgtcgtcagaggagaaaatgtggtcttgcttggagaagtagatctggat
aaagagtgtgatcagatcctccagcgagtttccattgaggagatcctggaggaacagcgg
acagaacagcaagccaagcaagagtcagagagactgaagctacaggcggtcaaagagcga
ggcttatccatccctaaagctgacacgctagatgatttctga
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