Carassius auratus (goldfish): 113107638
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Entry
113107638 CDS
T07313
Name
(RefSeq) replication factor C subunit 1-like isoform X1
KO
K10754
replication factor C subunit 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03030
DNA replication
caua03410
Base excision repair
caua03420
Nucleotide excision repair
caua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113107638
03410 Base excision repair
113107638
03420 Nucleotide excision repair
113107638
03430 Mismatch repair
113107638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caua03032
]
113107638
03400 DNA repair and recombination proteins [BR:
caua03400
]
113107638
DNA replication proteins [BR:
caua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113107638
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113107638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
AAA_30
AAA_7
RuvB_N
Rad17
AAA_33
AAA_17
AAA_14
AAA_16
AAA_18
BRCT_2
RNA_helicase
nSTAND3
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
113107638
NCBI-ProteinID:
XP_026126074
Ensembl:
ENSCARG00000024417
UniProt:
A0A6P6PY62
LinkDB
All DBs
Position
1:complement(31690462..31701872)
Genome browser
AA seq
1116 aa
AA seq
DB search
MMDIRRFFASSKPAAPKPSNESTNTDEEQKKKQKSKTKVKSLTSDEKPSGKRKKRVIIDS
DSEEEKEKEKETKKSAKDSDSDDTLMTLKTSKPKENGAAKGKKESDSGKAKQAQVSSRKS
PTKSPNAVSKGAAKSSQPTVSPRVEPPKHTPTSVMAFFGSSSVQRSEKKMVASSSTKRKA
PTQDTEEPLSDEAIAKQLQMDEDMELEKKIHDDEEFARTLAMLDDAPLPKKARGDSPTKS
STSTSDTKPKIDPSPKQSPVKTSSKLYRMKRQEEEQRKKDRGEKQMKISPKKEPMSPTSS
ERAATPKSAASVSTGATKSPKSVGAPLKTSPAKPENKSPEDLEKKRANSSAYRNFLNREG
PRALGSKEIPQGAENCLEGCVFVLTGVLESLERDDAKSLIERYGGKVTGNVSRKTTYLVL
GRDSGASKSEKAESFGTKIINEDELLELIRTKPGKKSKYEIAAEAENKSFKARTPDSRHK
HSSPSKKATPEEPSPKKSSPSKGKSKPGSASKSGTLGVSHSEVKKSLSFDQTTSASPVSH
STPENDGRSLLWVDKYRPRSLKNLIGQQGDQSCANKLLRWLQNWHKHHSGITKAPSKLGK
FGSKDDGSGFKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVIAESL
NNTSIKNFYTGASQTVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLIKQSKIPIICMCNDR
NHQKIRSLANYCYDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPALNEVILASNQDIRQVL
HNLSMWSATDKVMTYDQAKADANNARKDMKLGPFDVCRKVFASGEETAHMTLIDKSDLFF
HDYSLAPLFVQENFLHVRPASARGNLKNHLVLLSKTADSICDGDLVDKQIRSRQAWSLLP
TQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSAGKHSRIIQELASHMSLKTLSSKEAIN
LDYLPYLRSAVLEPLQSRGSEGANQSVQIIDDYDLIKEDVDNMMEISTWGGQPDPYSKLD
SKVKAAFTRAYNKESHLTPYSLQVVKKSRKGAVDPELIGELDGESQIQEEEDDDGVTADA
MIKQKKAKPAKDTKQEKPGASGMGKGRGKGKGKAVN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatccggaggttttttgcgtctagcaaacctgcggcacccaaaccttcaaat
gaaagcaccaacactgatgaagagcagaagaagaagcagaagtcaaaaactaaggtcaaa
agtctcacatctgatgaaaaaccttctggaaagcgaaagaaaagagtcataattgattca
gactctgaagaagagaaagagaaagaaaaggagaccaaaaagagtgctaaagattctgat
tcggacgacacattaatgactctaaaaacgtccaaacctaaagaaaatggagccgctaag
ggcaagaaagaatcagattcgggaaaagcaaaacaagcgcaagtttcttccaggaaatcc
ccaaccaaatccccaaacgcggtctcaaagggagcggcgaagagctctcagcccaccgtc
tccccaagggtggaaccaccaaaacacacgcccacctcagtaatggccttctttgggagc
tcaagtgttcagaggtcagagaagaagatggtggccagtagcagcactaagaggaaggca
cccacacaggacactgaagagccactcagtgatgaagccattgctaaacaacttcagatg
gacgaagacatggagttggaaaagaagatccatgatgatgaggaatttgcgagaacatta
gccatgctggatgatgctcccttaccgaaaaaggctcgaggggactccccaacaaagagc
agcacaagtacctcagacaccaaacccaaaatagacccgtcccctaaacaaagtcccgtg
aagaccagctccaaactgtataggatgaaaaggcaagaggaagagcaaaggaagaaagac
aggggtgaaaaacaaatgaagatttctcctaagaaagagcccatgtctccaactagctca
gagcgagcagctacgcccaaatccgcagcaagcgtttccacaggagccacaaaatcacct
aaaagtgtaggagcacccttgaaaacctcaccagcaaaaccagagaataaaagtccagag
gacttagagaaaaaacgggcaaattcatcagcctaccgtaactttttgaacagagaagga
ccacgagcactagggtctaaagagatcccgcagggagcagagaactgcctggaggggtgt
gtgtttgtgttgaccggtgtgttagagtctctggagagggatgatgccaagtcactaata
gagcgatatggcgggaaagtcacaggaaacgtcagccgaaaaaccacttaccttgttctg
ggacgagacagcggggcatcaaagtctgagaaggcggagagttttgggactaagatcata
aatgaagatgagctgttggagctcataagaaccaaaccaggcaagaagtctaaatacgag
attgcagcagaagcagagaataaatcctttaaagcaaggactccagactctagacacaaa
cactcttctccatccaagaaggccactccagaagagcccagccccaaaaagagcagccct
tcaaaggggaagtctaagcctggctctgcttctaaatctggaacactaggcgtctctcat
tcagaggtcaaaaagagtttgagcttcgatcaaaccacgagcgcatcccctgtatcccac
tccacccctgagaacgatgggaggagcctgttgtgggtggataagtaccgccctcgtagt
ctgaagaacctgattggccagcagggggatcagagctgtgccaacaagcttctgcgctgg
ttacagaactggcataaacatcacagcggcattacaaaagcaccatccaaattgggtaag
tttgggagtaaagatgacggttctggatttaaggctgcgttgttgtccgggcctcctggc
gttgggaagaccactactgctgccctcgtctgtgaggagttgggtttcagctacgtggag
atgaacgcgagctgcacacgcagtaagaacagcttaaaggaagtgatcgcagagtcactc
aacaacaccagcattaagaacttctataccggtgcatctcagacggtgagcagtaaacat
gtcctcataatggacgaggtggacggcatggcaggaaatgaagacagaggaggaatacag
gagatgattggtctgataaaacagtcaaagattcccatcatatgcatgtgcaatgaccgc
aatcatcagaagatccgctcgctggccaactactgctacgacctgaggtttcagagaccc
cgcgtcgagcagatcaagggggctatgatgtctatagctttcaaagagggtctgaaaatc
ccacccccggcacttaatgaagtcatcctggcgtccaatcaggatattcgacaggtgctg
cataatctaagcatgtggtcagctacagacaaggtcatgacctatgaccaggccaaagct
gatgctaacaatgctaggaaggacatgaagctgggtccgtttgacgtgtgtcggaaagtg
tttgcttcaggagaggaaaccgcccacatgactttgattgacaaatcagaccttttcttc
catgattactctttagcaccactatttgttcaggaaaacttcttgcatgtccgaccagcc
tctgcacggggaaatctgaagaatcatttggtgttgttgagtaaaacagcagacagtatt
tgcgatggagatttagtggacaaacagatccgctccagacaggcatggtctctgcttccc
acacaggcgatttatgcgagtgttttgccgggggaactgatgcggggttatatgagccag
tttccaacctttcccagctggttgggcaagttctcatccgctggcaaacacagccgcatc
atacaggagctcgcttcacacatgagcctaaagacgttaagcagtaaggaagcaataaat
ctggattacctgccgtatttgcgctcggcagtattagagcctcttcagtcgcggggctcg
gagggagccaatcagagcgtgcagatcatagatgattatgacctcatcaaagaggacgtt
gataacatgatggagatcagcacttggggcggacagccggatccttactctaaactggac
tccaaggtgaaagctgcgtttacaagagcctacaataaggaatcccatctcacgccgtac
tctttacaagtggttaagaaaagccgtaaaggtgccgttgaccctgagcttataggagag
cttgacggtgaatctcagatccaggaagaggaagacgacgatggcgttaccgcagatgca
atgataaagcagaaaaaagccaaaccagcaaaagacacaaagcaagagaaaccaggggct
tctgggatggggaaaggcaggggtaaaggaaagggaaaagcagtgaactga
DBGET
integrated database retrieval system
